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Dab solution

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The DAB solution is a laboratory reagent used in immunohistochemistry and other biochemical techniques. It serves as a chromogenic substrate that produces a brown-colored precipitate upon reaction with the target analyte, allowing for the visualization and identification of specific proteins or molecules within a sample.

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45 protocols using dab solution

1

BrdU and TUNEL Staining in Zebrafish

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BrdU labelling was performed as previously described77 (link) with slight modifications. In brief, 3 dpf zebrafish larvae were bathed in 10 mM BrdU (ThermoFisher Scientific), 15% dimethyl sulfoxide on ice for 30 min and rinsed with 1× E3 at 28 °C. Thereafter, larvae were fixed in 4% PFA for 2 h and stored in 100% methanol at −20 °C. Larvae were rehydrated, permeabilized using Proteinase K (20 µg ml−1), re-fixed in 4% PFA and incubated in 2 N HCl for 1 h at RT. The Vectastain Elite ABC kit (Vectorlabs) was used in the following steps. Larvae were incubated with BrdU antibody (MA1-82718, CiteAb, 1:300) overnight at 4 °C and color was developed using DAB solution (Sigma-Aldrich). For TUNEL staining, dechorionated and fixed larvae were rehydrated and permeabilized with proteinase K (10 µg ml-1). ApopTag peroxidase in situ apoptosis detection kit (Millipore) was used for labelling and color was developed using DAB solution (Sigma-Aldrich).
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2

Quantifying H2O2 in Cucumber Plants via DAB Staining

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To detect H2O2 in the inoculated cucumber plants, DAB staining was performed [52 (link)]. Leaves of cucumber B10 and Gy14 lines, collected at 0, 1 and 3 dpi, were soaked in DAB solution (Sigma, St. Louis, MO, USA) and incubated on a rotary shaker at 80× rpm for 4–5 h. After incubation, the leaves were placed in glass jars in DAB solution and vacuum-treated for 15 min to improve DAB infiltration. Later, leaves were transferred to the distaining solution (ethyl alcohol: glacial acetic acid: glycerol, 3:1:1, v/v/v) and heated until the tissues became transparent. Images obtained after DAB staining were quantified using ImageJ software [53 (link)]. Each sample was represented by four replicates.
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3

Specificity and Titer of FlaC Antiserum

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The specificity of FlaC protein antiserum was determined by the Western blot. Through SDS-PAGE, V. alginolyticus protein was transferred to a nitrocellulose (NC) membrane (TaKaRa, Japan). After incubating in skim milk solution for blocking, the membrane was incubated with mouse anti-FlaC protein antiserum and was then added to anti-mouse horseradish antibodies (TaKaRa, Japan). A DAB solution (Sigma, USA) colouration system was used on the NC membrane for band visualization. The FlaC protein serum specificity was determined according to the colour of the NC membrane bands ( 11 (link)
).
The titre of the antiserum was detected using the enzyme-linked immunosorbent assay (ELISA). The FlaC protein was dissolved to 0.5 μg/μL,
and 100 μL of the solution was added to the 96-well plate at 37°C for 3 hours. After incubating in a skim milk solution for blocking,
100 μL of anti-FlaC protein antiserum was added to each well at 37°C for 30 minutes. After rinsing, 100 μL anti-mouse horseradish
antibodies were added to each well. Then, a colouration solution (Sigma, USA) was added to every well at 37°C to prevent light
from affecting the colour reaction. Finally, a stop solution was added, and a microplate reader
(Thermo, USA) was used to detect the OD450 value ( 11 (link)
).
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4

Immunohistochemical Analysis of NSE

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The MDSCs were fixed with an ice-cold 4% paraformaldehyde, incubated with 3% H2O2 for 30 min., and blocked with goat serum. The cells were then incubated with neuron-specific enolase (NSE) (1 : 100, sc-51880) overnight at 4°C, followed by a goat anti-mouse IgG (1 : 100; sc-2005, Santa Cruz Biotechnology, USA). Next, cells were incubated with DAB solution (D3939, Sigma, USA).
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5

Immunocytochemical Staining for SP-A

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Immunocytochemical staining for SP-A was performed in human astrocytes and microglia in vitro. Coverglass cultured cells were fixed in 4% PFA, blocked with 5% normal goat serum for 30 min and incubated with rabbit SP-A polyclonal antibody (1:200; cat. no. sc-13977; Santa Cruz Biotechnology, Inc.) overnight at 4°C, followed by rabbit IgG secondary antibody at room temperature for 30 min. Sections were stained with DAB solution (Sigma-Aldrich; Merck KGaA), followed by counterstaining with hematoxylin to observe nuclei. Cells incubated only with secondary antibody served as negative controls.
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6

Visualizing ROS Burst in Plant Leaves

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For testing the ROS burst in the leaves by DAB (3,3′-diaminobenzidine) staining, detached leaf samples were collected at 2 d after infiltration of A. tumefaciens strains as previously described (Dong et al., 2011 (link)). Leaves were stained with 1 mg ml–1 DAB solution (Sigma-Aldrich, USA) at 25 °C for 6 h, then decolorized with boiling alcohol, and kept in 30% glycerin. To determine the role of Al6 in the ROS burst in response to flg22, a luminol-based assay was adopted as previously described (Trujillo, 2016 (link)). After the instantaneous expression of GFP and Al6 in N. benthamiana for 36 h, leaf disks were washed with water and kept overnight in the dark at room temperature. Then, the leaf disks were stained in test buffer containing luminol (Sigma-Aldrich, USA), horseradish peroxidase (Sigma-Aldrich, USA), and 1 μM flg22 (GenScript, China), and luminescence detection was conducted for at least 30 min in the microplate reader (BioTek, China).
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7

Immunohistochemical Staining of Brain Tissue

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Mice were transcardially perfused with 4% paraformaldehyde (PFA) and postfixed for an additional 24 h. Brains were then transferred to PBS and immersed into 4% agarose before sectioning. 3,3′-Diaminobenzidine (DAB) staining was carried out as before (Engel et al., 2006 (link)). Slices were treated with 1% H2O2 for 45 min to inactivate endogenous peroxidases. This was followed by an incubation with blocking solution (10 ml: 8.3 ml 1× PBS, 1 ml 10% BSA, 0.5 ml 5% FBS, 0.2 ml Triton-X-100) for 1 h and primary antibody (AT8, 1:100, Invitrogen, CA, USA) overnight at 4°C. On the following day, tissue sections were washed 3× with PBS for 10 min each and incubated with Vectastain kit (Vector Laboratories, Burlingame, CA, USA; one drop of biotinylated antibody and three drops of horse/donkey serum were mixed in 10 ml of 1% BSA-PBS). This solution was added to the tissue and incubated for 90 min at room temperature. Three washes were performed with PBS for 10 min followed by a 90 min incubation with Avidin (ABC) peroxidase complex at room temperature (two drops of reagent A and reagent B in 10 ml of 1% BSA-PBS). Slices were washed with PBS for 20 min and immersed in DAB solution (Sigma-Aldrich, Arklow, Ireland) for approximately 10 min. Then, slices were mounted using FluorSaveTM. Staining was examined under a light microscope.
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8

Visualizing H2O2 Accumulation in Plant Tissue

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H2O2 accumulation in plant tissue was examined by staining with DAB as described previously (Xiao et al., 2003 (link)). Leaf pieces were infiltrated in DAB solution (Sigma) (1 mg/ml, pH 3.8) and shaken at room temperature for 12 h in the light. The leaf pieces were then destained with 95% ethanol. The cleared leaves were transferred to 50% glycerol. A microscope (Olympus) was used to take photographs. The accumulation of ROS was evaluated by ImageJ.
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9

Native Gel Electrophoresis for Enzyme Activity

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The method was basically adapted from a previously published protocol [27 (link)]. First, 30 µg of total protein extract was loaded on three identical 10% native polyacrylamide gels. Afterwards, electrophoresis for 16 h at 70 V and 4 °C was performed. Gel 1 was stained with Coomassie as a loading control. Gel 2 was used for peroxidase activity staining: the gel was washed three times for 10 min in PBS (pH 7.4) and then incubated in 30 mL DAB solution (30 mg diaminobenzidine; Sigma-Aldrich, St. Louis, MO, USA; D8001) dissolved in 30 mL PBS (pH 7.4) and 3 µL 30% hydrogen peroxide (Carl Roth, Karlsruhe, Germany; 8070.2) for 20 min under shaking. To stop the reaction, the gel was washed in H2O twice. Gel 3 was used for catalase activity staining: the gel was washed with H2O three times (10 min each) and subsequently incubated in 30 mL of H2O with 3 µL of 30% hydrogen peroxide under shaking in the dark. The gel was washed with H2O twice and was incubated for 10 min on a light table with 2 g FeCl3 × 6 H2O (Sigma-Aldrich, St. Louis, MO, USA; P742.1) in 10 mL H2O and 1.2 g K3[Fe(CN)6] (Carl Roth, Karlsruhe, Germany; 244023) in 10 mL H2O. Both solutions were mixed and immediately used. Afterward, the gel was washed with H2O and documented by scanning.
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10

Reactive Oxygen Species Detection

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Reactive oxygen species levels were tested by DAB (3, 3′-diaminobenzidine) staining. The candidate effectors were expressed in N. benthamiana leaves for 2 days, and immersed in 1 mg/ml DAB solution (Sigma-Aldrich, St. Louis, CA, United States) at 25°C for 6 h, then decolorized in industrial alcohol and preserved in 30% glycerol. Finally, photographs were taken at natural light.
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