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Gtx121937

Manufactured by GeneTex
Sourced in United States, United Kingdom

GTX121937 is a laboratory equipment product designed for DNA and RNA extraction and purification. It utilizes a proprietary technology to efficiently isolate nucleic acids from various biological samples. The core function of this product is to provide a reliable and consistent method for extracting genetic material for further analysis and research purposes.

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9 protocols using gtx121937

1

Skin Protein Analysis: Pten, Akt, β-Catenin Signaling

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Freshly obtained skin samples from mice with hair removal were prepared in a lysis buffer containing 1% Triton X-100, 1% deoxycholic acid, 2 mM CaCl2 and protease inhibitors (10 μg/mL leupeptin, 10 μg/mL aprotinin, 1.8 mg/mL iodoacetamide and 1 mmol/L phenylmethyl sulfonyl fluoride) and quantified with a BCA protein assay kit (Pierce). Equal amounts of total protein were subjected to electrophoresis on 12% Bis-Tris gels, transblotted onto nitrocellulose membranes and probed with different primary antibodies: anti-Pten (1:1000, 138G6, Cell Signaling Technology), anti-p-Akt (Ser473, 1:1500, GTX28932, GeneTex), anti-p-β-catenin antibody (Ser552, 1:1000, 5651S, Cell Signaling Technology), anti-p-Gsk-3β (Ser9) antibody (1:1000, 5558S, Cell Signaling Technology), and anti-p-β-catenin antibody (Ser675, 1:1000, 4176S, Cell Signaling Technology), anti-Akt antibody (1:1000, GTX121937, GeneTex), anti-β-catenin antibody (1:1000, 8480, Cell Signaling Technology), respectively, followed by a peroxidase-conjugated secondary antibody (KPL). Immunoreactive bands were detected using ECL kit according to the manufacturer's instructions. Subsequent reprobing using anti-GAPDH was performed for internal loading control.
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2

Protein Extraction and Western Blot Analysis

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Cells were lysed in modified radioimmunoprecipitation assay buffer (modified RIPA) [50-mM Tris-HCl (pH 7.4), 150-mM NaCl, 1-mM EDTA, 1% NP-40, 0.25% sodium deoxycholate, 1-mM dithiothreitol, 1-mM phenylmethylsulfonyl fluoride, aprotinin (1 mg/ml), and leupeptin (1 mg/ml)]. Specific antibodies against α-tubulin (T6199, Sigma), CEBPD (sc-636, Santa Cruz Biotechnology), phospho-p44/42 (#4377, Cell Signaling), total p44/42 (#9102, Cell Signaling), phospho-p38 (#9211, Cell Signaling), total p38 MAPK (#9212, Cell Signaling), phospho-AKT (GTX61708, GeneTex), total AKT (GTX121937, GeneTex), SDF4 (10517-1-AP, Proteintech), and CXCR4 (60042-1- Ig, Proteintech) were used for western blotting.
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3

Comprehensive Immunostaining of Frozen Tissues

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Frozen skin tissue sections were incubated with different primary antibodies at 4 °C overnight; antibodies included anti-CD49f-biotin (GoH3, 1:150, BioLegend), anti-Ki67 (20Raj1, 1:100, eBioscience), anti-Akt (GTX28932, phospho Ser473, 1:150, GeneTex), anti-Akt (Akt 1+2+3) (GTX121937, 1:150, GeneTex), anti-CD34-biotin (RAM34, 1:150, eBioscience), anti-Lgr-5 (ab137484, 1:200, Abcam), anti-CD45 (30-F11, 1:150, BioLegend), anti-CD45-Biotin (30-F11, 1:150, BioLegend), anti-F4/80-Biotin (BM8, 1:150, BioLegend), anti-F4/80 (BM8, 1:150, BioLegend), anti-Ly6C-Biotin (RB6-8C5, 1:200, BioLegend), anti-Ly6C (HK1.4, 1:200, BioLegend), anti-MHC II (14-4-4S, 1:200, eBioscience), anti-TNF-α (1F3F3D4, 1:100, eBioscience), anti-TNFR1-Biotin (55R-170, 1:100, BioLegend), anti-β-catenin (C2206, 1:150, Sigma) and anti-Phospho-β-Catenin (Ser552) (5651S, 1:100, CST Signaling). Secondary antibodies with different fluorescence conjugates (FITC, Cy3/TRITC and Alex Fluor 647) were used for detection, and cells were visualized with an Olympus FV1000 confocal microscope.
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4

Protein Expression Analysis in DM1 Cells

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Total cell proteins were prepared from the DM1 model cells, as previously described (Nakamori et al., 2017 (link)). Then, the proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and immunoblotted with the following primary antibodies: mouse anti-IGFBP3 (1:500; MAB305, R&D Systems), rabbit anti-PAI-1 (1:2000; NBP1-19773, Novus), rabbit anti-AKT (1:500; GTX121937, GeneTex), rabbit anti-phospho-Akt (Ser473) (1:500; 4,058, Cell Signaling Technology), rabbit anti-p53 (1:100; 2,527, Cell Signaling Technology), rabbit anti-p21 (1:1,000; 2,947, Cell Signaling Technology), rabbit anti-p16 (1:1,000; ab108349, Abcam), and rabbit anti-GAPDH (1:1,000; G9545, Sigma-Aldrich). After incubation, the immunoblots were washed, incubated with horseradish peroxidase-conjugated anti-mouse immunoglobulin (Ig) G or anti-rabbit IgG (GE Healthcare), and detected by ECL Prime Western Blotting Detection Reagent (GE Healthcare) using a ChemiDoc Touch Imaging System (Bio-Rad).
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5

Molecular Mechanisms of AKT and GSK-3β Regulation

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For Western blotting analysis, antibodies against AKT (GTX121937), and GAPDH (GTX100118) were purchased from GeneTex (Hsinchu, Taiwan); anti-pAKTS473 (CST4060), anti-GSK-3β (CST9315), and anti-pGSK-3βS9 (CST9323) were purchased from Cell Signaling (Danvers, MA, USA). The PI3K inhibitor LY294002 and Akt inhibitor SH-6 were obtained from Enzo Life Sciences (Farmingdale, NY, USA). CA strains SC5314 and SC5314-GFP were gifts from Dr. Lo Hsiu-Jung (National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Taiwan). A plasmid containing cDNA encoding a GSK-3β mutant GSK-3βS9A was a gift from Scott Friedman lab (Addgene plasmid # 49492; http://n2t.net/addgene:49492; RRID:Addgene_49492). The cDNAs was subcloned into pLentiviral vector to generate lentivirus carrying GSK-3βS9A cDNA. Lentiviral pGIPZ carrying either shRNA vectors targeting human LDOC1 (shLDOC1) or GFP-tagged LDOC1 ORF were purchased from GE Dharmacon (Lafayette, CO, USA).
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6

Antibody-based Protein Expression Analysis

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Primary antibodies against focal adhesion kinase (FAK; #3285s), phospho-FAK (#8556s), and the mechanistic target of rapamycin (mTOR; #2972s) were purchased from Cell Signaling Technology (Beverly, MA, USA). Primary antibodies against AKT (#GTX121937), phospho-AKT (#ab28821), PDGFRB (#GTX61115), and phospho-PDGFRB (#GTX61797) were purchased from GeneTex (Irvine, CA, USA). Primary antibodies against cyclooxygenase-2 (COX-2; #160126), inducible nitric oxide synthase (iNOS; #610432), glyceraldehyde 3-phosphate dehydrogenase (GAPDH; #NB300-221), and phospho-mTOR (#ab109268) were purchased from Cayman Chemical (Ann Arbor, MI, USA), BD Transduction Laboratories (Lexington, KY, USA), Novus Biologicals (Centennial, CO, USA), and Abcam (Cambridge, MA, USA), respectively. Horseradish peroxidase- (HRP-) conjugated secondary antibodies against mouse (#GTX213112-01) and rabbit (#GTX213110-01) immunoglobulin G were also purchased from GeneTex. All other reagents that are not listed were purchased from Sigma-Aldrich (Louis, MO, USA).
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7

Western Blot Analysis of Protein Expression

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Freshly obtained skin samples from mice back with hair removal were prepared in a lysis buffer containing 1% Triton X-100, 1% deoxycholic acid, 2mM CaCl2 and protease inhibitors (10 μg/ml leupeptin, 10 μg/ml aprotinin, 1.8mg/ml iodoacetamide and 1mmol/l phenylmethyl sulfonyl fluoride) and quantified with a BCA protein assay kit (Pierce). Equal amounts of total protein were subjected to electrophoresis on 12% Bis-Tris gels, transblotted onto nitrocellulose membranes and probed with different primary antibodies: Anti-p53 (1:1000, sc-393031,Santa Cruz), anti-p16 (1:750, sc-1681,Santa Cruz), anti-p21 (1:250, sc-397,Santa Cruz),anti-GAPDH (1:1000, HC301-01, Transgen Biotech), anti-Akt (phosphoSer473, 1:5000, GTX28932,GeneTex), anti-Akt (Akt 1+2+3)(1:1500, GTX121937,GeneTex), anti-NF-κB (1:500, sc-8008,Santa Cruz), anti-NF-κB (phosphor Ser536,1:1000,93H1, Cell Signaling Technology), anti-Pten (phosphoThr366/pS370, 1:2000, GTX54620, GeneTex), anti-Pten (1:1000, 138G6,Cell Signaling Technology) respectively, followed by a peroxidase-conjugated secondary antibody (KPL). Immunoreactive bands were detected using ECL kit according to the manufacturer’s instructions. Subsequent reprobing using anti-GAPDH was performed for internal loading control.
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8

Western Blot Analysis of Signaling Proteins

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Western blotting was performed as previously described [27 (link)]. RIPA lysis buffer with 1 mM protein phosphatase inhibitor was added into cells for protein extraction. The lysate was collected and centrifuged at 12,000 r/min for 10 min at 4 ℃. The BCA protein assay kit (Thermo Scientific) was used to determine the concentration of proteins. The proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred onto PVDF membranes (Bio-Rad, Hercules, CA, USA). Membranes were blocked with 5% BSA (Sigma-Aldrich, Darmstadt, Germany)-TBST buffer solution (Bio Froxx, Guangzhou, China) for 1 h at room temperature, incubated with antibodies against SFPQ (ab38148, Abcam, U.K.), AKT (GTX121937, GeneTex, USA), p-AKT (WLP001a,Shenyang Wanlei Biotechnology Co., Ltd., China), RUNX2 (ab23981, Abcam, U.K.), and β-actin (30101ES, Shanghai Yisheng Biological Co., Ltd., China) at 4 ℃ overnight. Subsequently, incubated with horseradish peroxidase-conjugated secondary antibodies (SE134, SA131, Solarbio, China) for 1 h. Protein bands were detected using a chemiluminescence system (Bio-Rad Laboratories, Hercules, CA, USA) with an enhanced chemiluminescence (ECL) kit (Millipore, Darmstadt, Germany). Signal intensity was compared using the Image J software (NIH, Bethesda, MD, USA).
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9

Quantitative Analysis of AKT and PTEN Signaling

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Whole protein extracts of the cells for western blotting were prepared using PRO-PREP lysis buffer (Intron, #17081), and protein concentrations were determined using the BCA protein assay (Thermo Fisher Scientific, #23227). Proteins were separated by 10% SDS-PAGE, blotted onto nitrocellulose membranes, and then probed with antibodies against total AKT (Genetex, #GTX121937, 1:3000 dilution), phosphorylated AKT (Genetex #GTX61708, 1:2000 dilution), total PTEN (Genetex, #GTX101025, 1:500 dilution), and phosphorylated PTEN (Genetex, #GTX61780, 1:1000 dilution). The membranes were then incubated with a goat anti-rabbit IgG secondary antibody (Jackson, #003318367, 1:4000 dilution) for 1 hour. The membranes were incubated in ECL-prime solution (GE Healthcare Amersham, #RPN2232) in the dark for 1 minute and then exposed under a fluorchemHD2 (Cell biosciences) for visualization.
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