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45 protocols using mat 253

1

Paired Δ47 and Δ48 Analysis of Devils Hole Calcite

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We analyzed four Devils Hole (Amargosa Desert, Nevada) mammillary calcite samples from core DH-2 for paired Δ47 and Δ48 values, including DH-2–10 (172 ± 4 ka), DH-2–11 (163 ± 5 ka), DH-2–12 (57 ± 5 ka), and DH-2–13 (151 ± 4 ka) (Winograd et al., 1992 (link)), that previously were measured on a Thermo MAT 253 for Δ47 in Tripati et al. (2015) (link). The samples were re-analyzed on Nu Perspective mass spectrometers. Devils Hole calcite is assumed to have precipitated near isotopic equilibrium due to an extremely slow precipitation rate (0.1–0.8 μm year−1) in water with a low calcite saturation index (0.16–0.21) (Coplen, 2007 (link); Kluge et al., 2014 (link)). Devils Hole is thought to have had a stable temperature of 33.7 (±0.8) °C throughout the Holocene (Coplen, 2007 (link); Kluge et al., 2014 (link); Winograd et al., 1988 (link), 1992 (link)).
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2

Atmospheric Oxygen Isotope Analysis

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Measurements of 18O/16O, 17O/16O and 32O2/40Ar (δO2/Ar) were performed using a multi-collector mass spectrometer Thermo Scientific MAT253 run in dual inlet mode. For each extracted air sample, 3 runs of 24 dual inlet measurements were performed against a laboratory standard gas obtained by mixing commercial O2 and commercial Ar in atmospheric concentration. The mean of the three runs were calculated for each sample and the standard mean deviation is calculated as the pooled standard deviation over all duplicate samples hence integrating the variability associated with extraction, separation and mass spectrometry analysis.
The resulting pooled standard deviations before the corrections are 0.05‰, 0.02‰, 6.4‰ and 6 per meg for δ18Oatm, δ17Oatm, δO2/Ar measurements and Δ17O of O2 calculation, respectively.
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3

Stable Isotope Analysis of Speleothems

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Powders for stable isotope analysis were milled from central slabs of collected speleothems at approximately 50-year resolution. A total of 1644 new stable isotope measurements were conducted at The Australian National University using Finnigan MAT-251 and Thermo MAT-253 isotope ratio mass spectrometers coupled to Kiel microcarbonate preparation devices. To ensure consistency among runs, in-run measurements of the NBS-19 standard (δ18O = −2.20‰ VPDB, n = 685) were complemented by less frequent measurements of NBS-18 (δ18O = −23.0‰ VPDB). We report a δ18O 2σ error of ± 0.09‰, which is the average of the 2σ errors for the NBS-19 standards in each mass spectrometer run (n = 131).
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4

Sulfur Isotope Analysis of Quartz Filters

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Half of each quartz fiber filter was cut into pieces for δ34S analysis. They were extracted into 50 mL of ultrapure water and sonicated for 15 min, and then repeated three times. The solution was then filtered with 0.45 μm syringe filters. The filtrate was acidified to a pH < 2 by adding HCl solution and then trapped as barium sulfate (BaSO4) by adding droplets of supersaturated BaCl2 solution. The BaSO4 precipitation was filtered using 0.22 μm acetate filters 24 h later. After heating in an oven with step-wise heating at 200 °C for 2 h, 400 °C for 2 h, and 850 °C for 4 h, 340–450 μg BaSO4 were weighted and wrapped in tin capsules. The tin cups were crushed into a small size and placed into the isotope ratio mass spectrometer (MAT253, Thermo, Waltham, MA, USA). The δ34S of BaSO4 was standardized with laboratory barite standards (referenced to NBS-127 and IAEA SO-5), and reported to the international sulfur isotope standard V-CDT [22 (link)].
The δ34S of SO42− was calculated by Equation (1):
where the isotopic ratio of (34S/32S)standard = 0.044. Overall uncertainty for δ34Ssulfate values reported here were ±0.2‰ [22 (link)].
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5

Sulfur Isotope Analysis via SF6

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All sulfur species - both reduced and oxidized moities - were converted to silver sulfide (Ag2S) (see Johnston et al., 2007 (link); Leavitt et al., 2014 (link)). Following this, samples were fluorinated under 10X excess of F2 headspace at 250°C, generating analyte sulfur hexafluoride (SF6). SF6 was then purified cryogenically via distillation at −117°C and chromatographically on a 6-foot molecular sieve 5 Å column coupled to a 6-foot HayeSep Q 1/8-inch column, with a TCD for detection and quantification. Purified SF6 was measured as SF5+ (m/z of 127, 128, 129, and 131) on a Thermo Scientific MAT 253 (1σ: δ34S ± 0.2 ‰, △33S ± 0.006 ‰, △36S ± 0.2 ‰).
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6

Soil Characterization and Microbial Biomass

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Soil WHC was measured by repeatedly saturating soils (20 g fresh soil) with deionized water for 2 h, draining in a funnel with an ash-free cellulose filter paper for 8 h, and then drying in 105°C for 24 h. Soil pH was measured at a 1:2.5 ratio of air-dried soil to deionized water by a pH electrode (Leici, Shanghai, China). Soil organic carbon (SOC) and total nitrogen (TN) were measured using an elemental analyzer (MAT-253, Thermo Fisher Scientific, USA) with ball-milled dry soil. Soil clay content (Clay) was measured by the hydrometer method [37 (link)].
We used the chloroform fumigation extraction (CFE) method to estimate the soil microbial biomass [38 (link)]. Briefly, 20 g of fresh samples were weighed in a 100-ml beaker, placed in a desiccator, and fumigated in the dark with alcohol-free chloroform for 48 h. Dissolved organic carbon (DOC) and nitrogen (DON) were extracted using 0.5 M K2SO4 from fumigated and nonfumigated soils. The difference in DOC between the fumigated and nonfumigated soils was considered as the microbial biomass carbon with a conversion coefficient of 0.45.
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7

Stable Isotope and Trace Element Analysis

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For δ13C analysis, approximately 150 μg samples were reacted with ~103% phosphoric acid at 70 °C in a Kiel IV carbonate device connected to a Thermo Scientific MAT 253 mass spectrometer. The carbon isotopic compositions are reported in the standard delta (δ) notation as permil (‰) deviations from Vienna PeeDee Belemnite (V-PDB), with external precision of ~0.05‰ (1σ) based on duplicate analyses of an internal standard. For analysis of 87Sr/86Sr ratio, carbonate powders of ~120 mg were dissolved in 30% acetic acid at room temperature to avoid dissolution of the non-carbonates. The solution then was centrifuged, evaporated and re-dissolved in 2.5 N HCl, standard cation-exchange procedures were performed to purify Sr from matrix ions and 87Sr/86Sr ratios were analyzed using a Thermo Scientific Triton thermal ionization mass spectrometer, following methods outlined in Lin et al.45 (link). The reported 87Sr/86Sr ratios were corrected for instrumental mass fractionation using a ratio of 86Sr/88Sr = 0.1194. Trace metal concentrations (Mn, Sr) were measured using an ICP AES instrument with a reproducibility of ±10% (2σ).
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8

Stable Isotopic Analysis of Soil and Rock

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The stable isotopic composition of total organic carbon (δ13C) and total nitrogen (δ15N) in soil, bedrock, and loose exposed rock samples was measured in triplicates by isotope ratio mass spectrometry (IRMS). A MAT 253 (Thermo Fisher Scientific) IRMS equipment was used, following the analytical methods of the US Geological Survey (Révész et al., 2012 ). About 0.5 g of dried sample was grounded and homogenized using autoclave-sterile mortar and pestle, and carbonates were removed with HCl (3 M). After 24 h of equilibration, pH was adjusted to neutral values with ultrapure water, and the sample then dried in an oven (50°C) until stable weight (~48 h). The δ13C and δ15N ratios were reported in the standard per mil notation (‰) using three certified standards (USGS41, IAEA-600, and USGS40), with an analytical precision of 0.1‰. The elemental content of both TOC and TN was measured as percentage of dry weight (%) during stable isotope measurements, using Flash HT Elemental Analyzer (Thermo Fisher Scientific).
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9

Dissolved Gas Composition and Isotopes

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Dissolved gas samples were collected with a bladder pump. Evacuated crimp-top glass serum bottles with butyl septa and preserved with mercuric chloride were filled by piercing the septa with a needle. Gas composition was determined in the Applied Geochemistry Laboratory at the University of Calgary by gas chromatography. The gas dryness parameter is defined as the ratio between the concentrations of methane and those of higher n-alkanes. The isotopic composition of methane and carbon dioxide was analyzed in the Isotope Science Laboratory at the University of Calgary on a ThermoFischer MAT 253 isotope ratio mass spectrometer (IRMS) coupled with a Trace GC Ultra and GC Isolink (ThermoFisher) and reported relative to V-PDB for δ13C and V-SMOW for δ2H. The precision for carbon isotope analyses was higher than ±0.5‰ for hydrocarbons, ±0.2‰ for carbon dioxide, and ±2‰ for δ2H of methane.
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10

Stable Isotopic Analysis of Nitrogen and Carbon

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Stable isotopic composition of total nitrogen (δ15N) and organic carbon (δ13C) was measured by Isotope-Ratio Mass Spectrometry (IRMS), using a MAT 253 (Thermo Fisher Scientific) and applying the USGS methods52 , as described elsewhere53 (link). Briefly, the homogenized, grounded samples were decarbonated with HCl and then dried (50 °C) after adjustment to neutral pH until constant weight. An analytical precision of 0.1‰ was determined by using three certified standards for carbon/nitrogen (USGS41, IAEA-600 and USGS40). The content of total nitrogen (TN) and organic carbon (TOC) was measured with an elemental analyzer (Flash HT, Thermo Fisher Scientific) during the stable isotope measurements.
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