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Antibiotic solution

Manufactured by Merck Group
Sourced in United States, Poland

The Antibiotic solution is a laboratory product designed to facilitate the growth and cultivation of microorganisms. It provides a nutrient-rich environment that supports the proliferation of various bacterial strains. The solution contains a carefully balanced combination of essential nutrients, minerals, and antimicrobial agents to promote the selective growth of target microorganisms while inhibiting the growth of undesirable contaminants.

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39 protocols using antibiotic solution

1

Cultivation of Monocytic, Dendritic, and Endothelial Cell Lines

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Monocytic Raw264.7 (ATCC®, Manassas, VI, USA, US-TIB-71™) cells were cultured in Dulbecco’s Modified Eagle’s Medium (DMEM) (Thermo Fisher Scientific, Waltham, MS, USA) in the presence of 10% fetal bovine serum (FBS), 2 mM glutamine (Sigma Aldrich, Darmstadt, Germany) and antibiotic solution (Sigma Aldrich, Darmstadt, Germany). Immature dendritic JAWSII cells (ATCC® CRL-11904™) were maintained in Iscove’s Modified Dulbecco’s Medium (IMDM) (Thermo Fisher Scientific, Waltham, MA, USA) in the presence of 20% FBS 4 mM glutamine, 1 mM sodium pyruvate and antibiotic solution (Sigma Aldrich). Pancreatic islet endothelial MS1 cells (MILE SVEN 1) (ATCC® CRL-2279™) were cultured in DMEM with 5% FBS and antibiotic solution.
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2

Isolation and Culture of Primary Microglia

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Primary cell cultures were obtained from the brains of PN6-PN8 wild-type pups. Brains were collected and placed in ice-cold PBS. Following mechanical dissociation, five or six brains were incubated in a 0.25% trypsin-EDTA solution (Sigma) containing 250K U/mL DNase I (Sigma). After centrifugation, the cell pellets were placed in T-75 cm2 flasks for 7 days at 37 °C, 5% CO2, in DMEM high-glucose media with 10% fetal bovine serum and antibiotic solution (Sigma). At confluence, the cells were plated onto cover slips in 24 well plates at a concentration of 40,000 cells/well in media. Cells were incubated with G-CSF 24 h later to allow adhesion. At day 4 in vitro, cells were treated with LPS (1 μg/mL) for 24 h and then fixed with PFA for immunofluorescence experiments [15 (link)].
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3

Melanoma Cell Line Spheroid Protocol

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Melanoma cell lines were cultured as recommended by repositories and routinely tested for mycoplasma contamination and authenticated by SNP fingerprinting (LGC Standards, Poland). Media were supplemented with FBS and Antibiotic Solution (Sigma-Aldrich). For details see Supplementary material, Table S1. WP760 and doxorubicin were dissolved in DMSO (150 μM and 10 mM stocks, respectively) and stored at 4 °C. Spheroids were formed by seeding 1 × 104 cells/200 μL medium in 96-well plates pre-coated with 1% noble agar. After formation of compact spheroids, cultures were continued in ultra-low-attachment 96-well plates. Subsequently, WP760 was added on 4th and 7th day after seeding. Medium (100 μL) was replaced 3 times/week. For culture under hypoxic conditions, cells were kept in an oxygen-controlled incubator (1% O2).
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4

HCAEC Cell Culture Protocol

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Primary HCAEC were cultured according to the manufacturer’s recommendations (ATCC) as described earlier [19 ]. Briefly, the cells were cultured in Vascular Cell Basal Media supplemented with a VEGF-based Endothelial Cell Growth Kit (5 ng/mL rh VEGF, 5 ng/mL rh EGF, 5 ng/mL rh FGF, 15 ng/mL rh IGF-1, 10 mM L-glutamine, 0.75 units/mL heparin sulfate, 1 μg/mL hydrocortisone, 50 μg/mL ascorbic acid, 2% fetal bovine serum, ATCC) and 1% antibiotic solution (Sigma-Aldrich) in 95% air and 5% CO2 at 37 °C. Cells with less than 80% confluence from passages 3–8 and less than 14 divisions were used in experiments.
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5

Cardiac Lineage Induction in Cells

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Cells were treated with Dulbecco’s Modified Eagle’s Medium low glucose (Thermo Fisher Scientific), 20% FBS (Sigma-Aldrich Co.), 1% antibiotic solution (Sigma-Aldrich Co.), 1% glutamax (Thermo Fisher Scientific), and 6 mM 5-azacytidine (Sigma-Aldrich Co.). To assess the specific lineage induction, we performed an indirect IF assay using Vectastain ABC system (Vector Laboratories, Inc., Burlingame, CA, USA) and mouse anti-pig α-cardiac actin (actin alpha cardiac muscle 1), mouse anti-pig cardiac troponin T, and mouse anti-pig phospholamban primary antibodies (all from Acris, San Diego, CA, USA). The analysis of samples was executed with Leica TCS-SP5 confocal microscope and LAS AF software (Leica Microsystems).
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6

Fibroblast Synchronization and UVR Exposure

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Normal skin fibroblasts cells (Hs 895.Sk, ATCC Cat# CRL77636) were obtained from the High Throughput Sciences Facility’s cell line repository at the Koch Institute for Integrative Cancer Research at Massachusetts Institute of Technology, USA. Cells were maintained in Dulbecco’s Modified Eagle Medium (DMEM Sigma Aldrich, USA) supplemented with 10% FBS (Sigma Aldrich, USA) and 1% antibiotic solution (Sigma Aldrich, USA) at 37 °C and in a 5% CO2 atmosphere. Cell synchronization using serum starvation protocol was performed to bring all the cells in to same phase of cells cycle (G1-phase). Briefly, at ~80% confluency the culture medium was replaced with serum-free medium and cells were incubated overnight. UVR exposure was performed in phosphate buffer saline (PBS) solution. Complete medium was again added after UVR treatment. For RS measurements, cells were cultured on a custom-made petri dishes with quartz cover slip bottom (043210-KJ, Alfa Aesar) to minimize the autofluorescence background4 (link). For phase imaging, cells were grown in normal petri dishes at ~60–70% confluency to facilitate acquisition over single cell in the imaging field of view.
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7

Kinase Inhibitor Profiling using Cell Lines

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The cell lysate mixture (cell line mix) used to profile all kinase inhibitors in this study was generated from K-562, COLO 205 and MV-4-11 cells grown in RPMI1640 medium (Biochrom GmbH), SK-N-BE(2) cultured in DMEM/HAM’s F-12 medium (Biochrom GmbH). All were supplemented with 10% FBS (Biochrom GmbH) and 1% antibiotic solution (Sigma). Cell lines were authenticated by multiplex human cell line authentication test (MCA) and tested internally for mycoplasma contamination. For MET-inhibitor profiling, Caki-1 cells were cultured in IMDM (Biorad) with 10% FBS. For EGFR-inhibitor profiling, BT-474 cells were grown in DMEM/HAM’s F-12 supplemented with 15% FBS (Biochrom). Kinase inhibitor affinity matrices (Kinobeads) were synthesized in house as published(14 (link)). Omipalisib with a linker was internally synthesized. Small molecule kinase and other inhibitors were purchased from Selleckchem, MedChemExpress, Active Biochem, Abmole, Merck or LC Labs.
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8

Culturing Murine C2C12 Myoblasts

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Murine C2C12 skeletal myoblast cells were obtained from the RIKEN Cell Bank (Tsukuba, Japan). Cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM; Sigma-Aldrich, MO, USA) supplemented with 10% fetal bovine serum (BIST-TEC; Equitech Bio Inc., TX, USA) and 1% antibiotic solution (Sigma-Aldrich) at 37°C in a humidified atmosphere of 5% CO2.
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9

Prostate Cancer Cell Xenograft Models

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The LNCaP and CWR22Rv1 cells were cultured in RPMI medium (ATCC, Manassas, VA). PC-3 and VCAP cells were grown in the F-12K medium (ATCC, Manassas, VA). All medium was supplemented with 10% fetal bovine serum (FBS, ATCC) and 1% antibiotic solution (Sigma-Aldrich, St. Louis, MO). Cells were cultured at 37°C in a humidified atmosphere of 5% CO2 in air. Cells were grown as monolayers and were harvested or split when they reached 80% confluence to maintain exponential growth. One day before the cell binding experiment, PCa cells were seeded in 24-well plates.
All animal experiments were conducted in accordance with standards of the Institutional Animal Care and Utilization Committee of Nanjing Medical University. 5 × 106 PC-3, LNCaP, CWR22Rv1, or PCa cells in 50% Matrigel (Becton Dickinson, Heidelberg, Germany) were injected subcutaneously into the mice left armpit to establish animal models.
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10

Culturing H9c2 Cardiomyoblasts for Bioenergetics

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H9c2 cardiomyoblasts were cultured according to the manufacturer’s recommendations (ATCC). Briefly, the cells were cultured in DMEM based modified media (4 mM L-glutamine, 4.5 g/L glucose, 1 mM sodium pyruvate, and 1.5 g/L sodium bicarbonate) supplemented with 10% fetal bovine serum and 1% antibiotic solution (Sigma-Aldrich) and maintained in 95% air and 5% CO2 at 37 °C. Cells maintained within 80–90% confluence from passages 3–10 were used in experiments. Mitochondrial bioenergetics, metabolism, and morphology of H9c2 cells are similar to primary cardiomyocytes [29 (link)].
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