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2 protocols using bay1251152

1

Human Prostate Cancer Cell Line Protocol

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Human PCa (LNCaP, VCaP, C4‐2B, 22Rv1, DU145 and PC‐3) and human embryonic kidney 293T cell lines were obtained from the American Type Culture Collection. The cells were cultured under standard conditions as previously described.
21 (link) Cells were grown in phenol red‐free Roswell Park Memorial Institute (RPMI)‐1640 medium (Corning) supplemented with 10% charcoal‐stripped serum (Hyclone), mimicking an androgen‐deprived environment for experimental purposes. Cells were treated with Thiamet G (MedChemExpress) at a final concentration of 25 µM, OSMI‐1 (MedChemExpress) at a final concentration of 20 µM, MDV3100 (MedChemExpress) at a final concentration of 10 µM, dihydrotestosterone (DHT, Sigma–Aldrich) at a final concentration of 10 nM, actinomycin D (MedChemExpress) at a final concentration of 5 µg/mL, cycloheximide (CHX) at a final concentration of 10 µg/mL, BAY1251152 (Selleckchem) at a final concentration of 10 µM and uridine diphospho (UDP)‐GlcNAc (Sigma) at a final concentration of 60 mM. All cell lines were authenticated with short tandem repeat profiling and accepted regular tests for mycoplasma contamination.
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2

Comprehensive Protein Analysis Protocol

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Antibodies and sources: CDK9, pCDK9, RNAPII, phospho-RNAPII, TGM2, Cyclin B1, Cyclin E1, and NUP98 (Cell Signaling Technology); CDC37, SPT5, Stomatin, PLK1, Cyclin A1 (Santa Cruz Biotechnology); BRD4, Cyclin T1 and GFP (Abcam); Caspase-8 (Enzo Life Sciences); β-Actin, pCDK9, Vimentin, and Flag (Sigma-Aldrich).
Reagents and sources: CellTiter-Blue Cell Viability assay and Caspase-Glo 3/7 assay (Promega); BrdU kit (Roche); Thymidine, 5-ethynyl uridine (EU), Azide-fluor 488 (Sigma-Aldrich); AnnexinV and 7AAD (BD); [γ-32P] ATP (3000Ci/mmol, Amersham Pharmacia); Trail, FasL (Enzo Life Sciences); PLA assay kit (Olink Biosciences); BAY1251152, Cisplatin, and Carboplatin (Selleckchem); BioCoat Matrigel invasion chamber (Corning); Migration chamber (Ibidi); RNeasy Plus kit (Qiagen), active GST-CDK9/Cyclin K (SRP5012, Sigma-Aldrich).
The following vectors were used: pCas9(BB)-2A-Puro (PX459) V2.0 (62988, Addgene); p3xFlag-CMV-7.1 (E7533, Sigma); pGEX-5X-3 (28–9545-55, GE Healthcare) and pEGFP-C2 (6083-1, Clontech). All siRNAs and primers were from Sigma-Aldrich.
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