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6 protocols using monoclonal anti β actin

1

Western Blot Analysis of Signaling Proteins

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Denatured protein lysates were resolved by 4–12 % NuPAGE gels (Invitrogen, Carlsbad, CA) and transferred to nitrocellulose membranes (Schleicher & Schuell, Dachen, Germany). The membranes were incubated with anti-5-LO (BD, Franklin Lakes, NJ); anti-p-Akt (Ser473), anti-pan-Akt (Cell signaling, Danvers, MA); or monoclonal anti-β-actin (Santa Cruz Biotechnology, Santa Cruz, CA) for 2 h at room temperature or overnight at 4 °C. Membranes were then washed (4 times) with TBS-T and incubated with horseradish peroxidase-conjugated secondary antibody (Pierce, Rockford, IL) for 1 h. Immunoreactive proteins were visualized by developing them with Lumi-light western blotting substrate (Roche Diagnostics GmbH, Mannheim, Germany), followed by exposure in a LAS-3000 (Fuji Film Co., Tokyo, Japan) according to the manufacturer’s instructions. This was followed by quantitation of specific bands with the Multi Gauge software (Fuji Film Co., Tokyo, Japan).
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2

Western Blot Analysis of Hippocampal Proteins

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Hippocampal proteins were extracted from each group using lysis buffer (Beyotime, China) and phosphatase inhibitor cocktail (Thermo Fisher Science, USA). Protein samples were mixed with loading buffer, heated at 100° C for 5 min, then separated on 10% SDS-PAGE and transferred to PVDF membranes. Then, blots were blocked with 5% nonfat dried milk for 2 h at room temperature. Monoclonal anti-Ppp1c (diluted 1 : 2000, molecular weight: 39 kDa, Abcam, USA), monoclonal anti-Arsa (diluted 1 : 2000, molecular weight: 54 kDa, Abcam, USA), anti-Tau (phospho S262 + T263) (diluted 1 : 2000, molecular weight: 79 kDa, Abcam, USA), anti- total Tau (diluted 1 : 2000, molecular weight: 52 kDa, Abcam, USA) or monoclonal anti-β-actin (diluted 1 : 1000, molecular weight: 42 kDa, Santa Cruz, USA) were used as primary antibodies. Anti-rabbit or anti-mouse IgG HRPs (diluted 1: 3000, Thermo Fisher Scientific, USA) were used as secondary antibodies. After washing in TBST, the membranes were exposed to chemiluminescence reagents using an electronic chemiluminescence kit on a phosphor imager (Pierce Biotechnology, USA) and analyzed for optical density based on Java (ImageJ) software (National Institutes of Health, Bethesda, MD, USA).
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3

Gingival Fibroblast NF-κB Signaling Dynamics

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Human gingival fibroblasts, isolated as previously described, were seeded in 12-well culture plates (2×105 cells/well) and incubated for 5, 10, 15 and 30 min with or without IL-1β (100 pg/ml) or TNF-α (50 ng/ml) (R&D systems, Inc, Minneapolis, USA). Cells were collected, lysed and protein concentration was measured as described above (ELISA section). The lysates were resolved by 10% TRIS-HCl polyacrylamide gel electrophoresis and proteins were transferred onto a nitrocellulose membrane. Protein detection was performed using primary polyclonal rabbit anti-human Iκα antibodies (clone C-21, cat. no. sc-371, Santa Cruz Biotechnology, CA, USA) or monoclonal anti-β-actin (cat. no. A5441, Sigma Aldrich, St. Louis, MO, USA) followed by secondary horseradish peroxidase-conjugated anti-rabbit (cat. no. P0448, Dako, Glostrup, Denmark) and anti-mouse (cat. no. 31340, Thermo Scientific, Rockford, IL, USA) antibodies respectively. The immunoreactive proteins were visualized using the ECL Plus Western Blotting Detection System (GE Healthcare, Uppsala, Sweden) and analyzed by ImageQuant LAS 4000 imager.
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4

Antibody Panel for Protein Signaling

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We used the following antibodies: polyclonal anti-STEP, anti-Pyk2 (pY402), anti-ERK1/2 (pT202/pY204), and anti-ERK1/2 from Cell Signaling Technology (Danvers, MA, USA); polyclonal anti-Pyk2, monoclonal anti-β-actin, and polyclonal anti-fyn from Santa Cruz Biotechnology (Santa Cruz, CA, USA); monoclonal anti-v-src (Ab1, clone 327) from Calbiochem (EMD Chemical, Merck, Darmstadt, Germany); polyclonal anti-GluN2B (pY1472), anti-GluN2B, and monoclonal anti-phosphotyrosine (pY, clone 4G10) from Millipore Bioscience Research Reagent (Billerica, MA, USA); and peroxidase-conjugated goat anti-mouse and goat anti-rabbit from Bio-Rad (Hercules, CA, USA). Protein A/G PLUS agarose was from Santa Cruz Biotechnology and Trysacryl-immobilized protein A from Thermo Scientific (Waltham, MA, USA). Nitrocellulose was from Schleicher and Schuell Bioscience Inc. (Dassel, Germany); p-nitrophenyl phosphate (p-NPP) and enolase were from Sigma Chemical (St. Louis, MO, USA). Complete protease inhibitor cocktail was from Roche Diagnostics (Basel, Switzerland). [γ32P] ATP (>3000 Ci/mmol) was obtained from DuPont NEN (Boston, MA, USA).
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5

Western Blot Protein Analysis

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Proteins were separated by SDS-PAGE and transferred to nitrocellulose or PVDF membranes using wet transfer. Following transfer, membranes were blocked in 5% (w/v) skimmed milk powder, 0.1% (v/v) Tween20 in Tris-Buffered Saline (TBS) (blocking buffer), and incubated with the appropriate primary and secondary antibodies. The primary antibodies used in this study include: homemade anti-HCV NS5B monoclonal, anti-β-actin monoclonal, anti-BIK (NBK) polyclonal (Santa Cruz Biotechnology, Santa Cruz, CA), anti-HCV core monoclonal (Pierce/Thermo scientific, Rockford, IL), and anti-GFP monoclonal (Roche, Indianapolis, IN) antibodies. Secondary antibodies used include: horseradish peroxidase (HRP)-conjugated goat anti-mouse and rabbit anti-goat antibodies (Pierce, Rockford, IL). Protein bands were visualized by enhanced chemiluminescence (ECL) according to the manufacturer’s protocol.
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6

Protein Expression Analysis by Western Blot

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Cells were collected and lysed, the protein was separated using 12% polyacrylamide gel, and transferred to polyvinyl difluoride membranes. After blocked with 5% bovine serum albumin and incubated with specific primary antibodies (anti-β-actin monoclonal (Santa Cruz Biotechnology, USA) or anti-γ H2AX monoclonal (Cell Signaling Technology, USA)), the membranes were incubated with anti-mouse or anti-rabbit IgG secondary antibody (Santa Cruz Biotechnology), then the blots were developed using an ECL western blotting detection reagent (GE Healthcare Bio-Sciences Corp., UK) and Luminoimage Analyzer LAS-3000 (Fuji, Japan).
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