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Colorimetric assay kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

Colorimetric assay kits are analytical tools used to quantify the concentration of specific analytes in a sample through color-based detection. These kits rely on chemical reactions that produce color changes proportional to the analyte's concentration, allowing for colorimetric analysis.

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11 protocols using colorimetric assay kit

1

Caspase-9 Activity Colorimetric Assay

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Caspase-9 activity was determined by using a colorimetric assay kit (Invitrogen; Carlsbad, CA, USA), with Ac-LEHD-pNA as substrate. During the assay, the peptide substrate was cleaved by caspase-9, resulting in the release of pNA, which was measured on a microplate reader at an absorbance wavelength of 405 nm. All further conditions were identical with those of the caspase-3 assay.
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2

Multiplexed Kidney Cytokine Analysis

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A multi-plex mouse-specific cytokine/chemokine LEGENDplex bead array (BioLegend) was used according to the manufacturer's protocol on homogenized kidney samples. All samples were run on a Miltenyi MACSquant flow cytometer, and analysis was performed using LEGENDplex analysis software (BioLegend). MPO concentrations were determined using a mouse specific MPO ELISA (Biolegend) according to the manufacturer's protocol on homogenized kidney samples. Blood Urea Nitrogen (BUN) levels were determined using a colorimetric assay kit (Invitrogen) on plasma samples isolated from whole blood taken at end of Candidiasis experiment.
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3

Serum Iron Determination Protocol

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Serum iron was determined as described previously (18 (link)) using a colorimetric assay kit from Thermo Scientific (Waltham, MA) as recommended by the manufacturer.
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4

Quantifying Caspase-3 Mediated Apoptosis

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A caspase-3 assay kit evaluated the apoptosis (Beyotime, Shanghai, China). Caspase 3 belongs to the CED-3 subfamily of the Caspase family and is a protease that plays an important role in the process of apoptosis (17 (link)). Caspase 3 Assay Kit is based on Caspase 3 which can catalyze the substrate acetyl-Asp-Glu-Val-Asp p-nitroanilide (Ac-DEVD-pNA) to produce yellow p-nitroaniline (pNA), which has strong absorption around 405 nm The activity of Caspase 3 can be detected by measuring absorbance (yellow product is proportional to the activity of Caspase 3 enzyme). The MG-63 cells were treated with paraffin in 96-well plates for 90 minutes and passed through 80 µL of reaction buffer (caspase-3 substrate, 2 mmol/L, 10 µL). Ten µL of cell lysate protein was incubated in each sample in an incubator (37 °C, 5% CO2) for 2 h. Used R&D Systems’ colorimetric assay kit (Thermo Scientific, USA) to measure samples at 405 nm.
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5

Cytosolic Protein Profiling for Sod1 and Ceruloplasmin

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The cytosolic protein extract obtained from duodenal scrapings was subjected to protein electrophoresis under non-reducing and non-denaturing conditions. The separation was carried out at 4 °C and a constant voltage of 160 V for 2 h. After electrophoresis, the gel was transferred to reaction buffer (0.13 mg/mL nitro blue tetrazolium chloride; 0.1 mg/mL riboflavin; 1 μL/mL TEMED; 50 mM KPO4 solution (pH 7.8)) and incubated for 45 min in the dark at RT. After the incubation, the gel was irradiated (visible light) until the visible bands appeared in the gel. Control of the amount of Sod1 protein in the sample loaded on the gel was estimated based on the Sod1 protein level calculated after densitometric analysis of Sod1 versus β-actin (reference protein) bands visualized following SDS-PAGE electrophoresis of the same cytosolic extract. Ceruloplasmin activity in the serum was determined using a colorimetric assay kit (Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s protocol.
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6

Fasting Lipid and Inflammation Biomarkers

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Fasting serum lipids (total cholesterol, high‐density lipoprotein [HDL] cholesterol, and triglycerides) and hsCRP (Dade Behring, Deerfield, IL) were measured at the San Francisco General Hospital clinical lab. Blood was drawn in the fasting state at the San Francisco General Hospital clinical laboratories and aliquots of serum and plasma were stored at −80°C until analysis. Total cholesterol, HDL‐cholesterol, and triglycerides were measured by colorimetric assay kits (Thermo Fisher Scientific, Middletown, VA). ApoA1 and apoB were measured by nephelometric immunoassays (BNII; Siemens Healthcare Diagnostics, Deerfield, IL). Platelet‐activating factors acetylhydrolase activity (PAH) and secretory phospholipase A2 levels were measured by kits from Cayman Chemical (Ann Arbor, MI). Lecithin‐cholesterol acyltransferase, and oxidized low‐density lipoprotein levels were measured with commercially available ELISA kits from ALPCO (Salem, NH), and Mercodia (Winston Salem, NC), respectively. Paraoxonase arylesterase activity was determined by using phenyl acetate as substrate as described by Furlong et al.20 (link)Percentage of CD19 B‐cells was assessed using quantitative flow cytometry performed at the San Francisco General Hospital reference laboratory (ARUP Laboratories, test code 0095920).
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7

Lipid and Insulin Quantification

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The liver triglycerides (TG) and cholesterol were processed by chloroform-methanol extraction based on a modified Folch method [25 (link)], and measured by an enzymatic reaction with colorimetric assay kits (ThermoFisher Scientific, Mississauga, ON, Canada and Randox Laboratories, Crumlin, UK). The plasma insulin was analysed using an ultrasensitive ELISA kit (Alpco, Salem, NH, USA), in accordance with the manufacturer′s instructions.
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8

Hepatic Lipid Extraction and Quantification

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Hepatic lipids were determined by using a modified Hara and Radin protocol (Hara and Radin, 1978 (link)). Briefly, 75 mg of hepatic tissue was homogenized in 1 ml of hexane:isopropanol (3:2) with 0.01% (w/v) of butylated hydroxytoluene to prevent lipid peroxidation. Following the addition of 300 μl of 0.47 M Na2SO4, samples were centrifuged for 20 min at 7500g and the upper organic phase was transferred to a clean tube and evaporated under nitrogen. To solubilize the lipid, 500 μl hexane containing 0.1% Triton-X was added and mixed gently for 20 min. The hexane was evaporated under nitrogen and 500 μl of dH2O was added to the tube. Prior to assaying for triglyceride and cholesterol levels, samples were incubated at 37 °C for 15 min. Triglyceride and cholesterol concentrations in lipid extracts were determined enzymatically with colorimetric assay kits (ThermoFisher Scientific, Middletown, VA).
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9

Serum Biochemistry Profiling in Mice

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Mice were fasted about 10 hours prior to blood collection. Blood was collected from the retro-orbital venous sinus using EDTA-coated blood-collecting capillaries. Mice were temporarily anesthetized using isoflurane before collecting blood. For nonterminal procedures about 200 µL was collected otherwise about 600 µL was collected. Blood from the capillary was transferred into BD microtainer tubes and then centrifuged according to the manufacturer’s protocol to separate the serum. Serum was then transferred into 1.5 mL microcentrifuge tubes and snap-frozen in liquid nitrogen before storing at −80 °C. Serum cholesterol, triglycerides, ALT, and AST activity were measured using colorimetric assay kits provided by Infinity (Thermo Scientific). Serum bilirubin, both direct and indirect, was measured using the Sigma Bilirubin Assay kit (MAK126 Sigma) according to the manufacturer’s protocol. Snap-frozen serum (100 µL) collected from control and acSRSF1 HKO mice were submitted to the Mouse Metabolic Phenotyping Core at the University of Cincinnati for serum analysis. A serum chemistry panel was obtained for each sample with measured concentrations of serum triglycerides, cholesterol, phospholipids, non-esterified fatty acids, glucose, ketones, ALT, and AST.
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10

Metabolic and Inflammatory Biomarkers

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Plasma total cholesterol, triglyceride, and glucose concentrations were measured enzymatically using colorimetric assay kits (ThermoFisher, Middletown, VA). Plasma insulin (Mercodia, Winston Salem, NC) and adiponectin (ALPCO, Salem, NH) concentrations were determined using ELISA kits. Plasma concentrations of inflammatory markers IL-1β, IL-6, and TNFα were determined by ELISA (eBioscience, ThermoFisher, Middletown, VA). HOMA-IR was calculated from fasting glucose and insulin levels (glucose, mg/dL x insulin, mU/L ÷ 450).
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