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7 protocols using cd45ro pe cy7

1

Multiparametric Flow Cytometry Analysis

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FACS analysis of cell surface CAR and protein expression was performed using a CytoFLEX S flow cytometer (Beckmam Coulter, CA, USA). CD22-CAR was detected by incubation with APC-F(ab)2 (Jackson Immunoresearch, USA). The following human monoclonal antibodies were used for detection of cell surface proteins: CD22-APC, CD22-PE, CD19-PE, CD45-PerCP/Cy5.5, CD3-APC/Cy7, CD8-Pacific Blue, CD4-APC, CD45RO-PE/Cy7, CD45RA-FITC, CCR7-APC (all from BioLegend). CD22 site density was quantified by Quantity-PE beads (BD Biosciences, USA) following instructions. Both GFP-expressing cells and CFSE dye-labeled cells were identified through the FITC channel.
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2

Phenotyping and Transgene Detection of CAR-T Cells

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To detect phenotype and subset, CAR-T cells were stained with mouse anti-human CD4 Percp, CD8 PE, CD62L PE, CCR7 Percp and CD45RO PE/Cy7 on day 7 (Biolegend). To determine CAR transgene, Alexa 647-labeled F(ab)2 fragment of Goat anti-Mouse IgG (Jackson ImmunoResearch) was utilized. All samples were analyzed with canto II (BD Biosciences), and data were processed by FlowJo software.
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3

Comprehensive Lymphocyte Immunophenotyping Protocol

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The following antibodies were used:

Antibody mix 1: CD3 PerCP Cy5.5 (BD552852), CD4 V450 (BD560345), CD8 V500 (BD560774), CD197 Alexa Flour 647 (BD557734), CD45RA PE Cy7 (BD560675), CD183 Alexa 488 (BioLegend 353710), and CD196 PE (BioLegend 353410)

Antibody mix 2: CD4 FITC (BioLegend 357406), CD25 PE (BD555432), CD194 BV421 (BioLegend 395414), CD127 Alexa Flour 647 (BD558588), CD45 V500 (BD560779), CD45 RO PeCy7 (BD337168), CD3 PerCP Cy5.5, and HLA-DR APC H7/Cy7 (BD561358)

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4

Comprehensive CAR and Immunophenotyping Analysis

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FACS analysis of cell surface CAR and protein expression was performed using an LSR II Fortessa flow cytometer (BD Biosciences). CD22-CAR was detected by incubation with 22-Fc (R&D Systems), followed by incubation with human IgG-specific PE-F(ab)2 (Thermo Fisher Scientific). The following human monoclonal antibodies were used for detection of cell surface proteins: CD22-APC, CD22-PE, CD19-Pacific Blue, CD45-PerCP/Cy5.5, CD3-APC/Cy7, PD1-PE/Cy7, LAG3-APC, TIM3-Pacific Blue, CD8-APC, CD8-PE/Cy7, CD45RA-APC, CD45RO-PE/Cy7, CCR7-Pacific Blue, CD4-Pacific Blue, CD69-APC (all from BioLegend). CD22 site density was determined using QuantiBrite-PE beads (BD Biosciences) using methods previously described (PMID: 20872890). Dead cells were identified using eFluor 506 fixable viability dye (Thermo Fisher Scientific). GFP-expressing leukemia was identified through the FITC channel.
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5

Detailed Phenotyping of T Cell Subpopulations

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Directly after Ficoll-Paque isolation, between 5∙107 and 20∙107 PBMCs were stained with CD95-FITC, CD4-APC-eF780 (both eBioscience), CD3-PerCP, CCR7-BV421, CD8a-BV510, and CD45RO-PE-Cy7 (all from BioLegend), and either CD56-APC, CD56-PE, or CD56-PE/Dazzle-594 (the first purchased from BD Biosciences and the latter two from BioLegend). T-cell subpopulations were defined as follows: truly naive, TTN (CCR7+CD45RO-CD27+CD95+), central memory, TCM (CD45RO+CD27+), effector memory, TEM (CD27-CD45RO+) and effector memory re-expressing RA, TEMRA (CD27-CD45RO-). The full gating strategy can be found in S1 Fig. Cells were sorted on a FACSAria II or FACSAria III sorter (BD Biosciences), and data was analyzed with the BD FACSDiva v8.0.1 and FlowJo V10 software.
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6

Multiparameter Flow Cytometry for Immune Profiling

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The following monoclonal antibodies and reagents were used with the appropriate isotype controls and were obtained from BD Biosciences unless otherwise stated. Human immunoglobulin κ light chain allophycocyanin (APC) (catalog no. 561323), CD45 AlexaFluor 700 (catalog no. 56056), CD19 APC-Cy7 (Biolegend, catalog no. 348794), human immunoglobulin λ light chain AlexaFluor 488 (Biolegend, catalog no. 316612), CD138 PerCP-Cy5.5 (catalog no. 564605), CD38 BV421 (catalog no. 562444), LIVE/DEAD Fixable Aqua Dead Cell Stain Kit (Life Technologies, catalog no. L34957), CD14 V500 (catalog no. 561391), CD56 BV605 (catalog no. 562780), CD20 BV650 (catalog no. 563780), CD3 BV711 (Biolegend, catalog no. 317328), BCMA PE (Biolegend, catalog no. 357504), CD200 PE-Cy7 (Biolegend, catalog no. 329212), CD200 PE (Biolegend, catalog no. 329306), CD200R PE-Cy7 (Biolegend, catalog no. 329312), CD200R APC (Biolegend, catalog no. 329307), CD200R PE (Biolegend), CD3 BV421 (catalog no. 562427), CD4 BV785 (Biolegend, catalog no. 317442), CD8 APC-Cy7 (catalog no. 557834), CD197(CCR7) FITC (catalog no. 561271), CD45RO PE-Cy7(Biolegend, catalog no. 304230), and CD274(PD-L1) APC (catalog no. 563741). The data were acquired with BD Fortessa and analyzed with FlowJo (version 10).
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7

Analysis of B7-H3 Expression and T Cell Activation

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For analysis of B7-H3 surface expression and B7-H3xCD3 binding, cells were stained with a parental murine B7-H3 antibody (10 µg/mL) carrying the same B7-H3 binding clone as our construct (7C4), B-H3xCD3 or the corresponding isotype controls followed by a goat anti-mouse-PE conjugate (Dako, Glostrup, Denmark) or a donkey anti-human-PE conjugate (Jackson ImmunoResearch, West Grove, USA), respectively. T cell activation, degranulation and proliferation were determined using CD69-PE, CD107a-PE (BD Pharmingen) as well as CD4-APC, CD8-FITC, CD62L-PB and CD45ro-PeCy7 (BioLegend, San Diego, CA) fluorescence conjugates. For flow cytometric analysis of target cell lysis, tumor cells were loaded with 2.5 µM CellTrace™ Violet (Thermo Fisher Scientific, Waltham, MA) and cultured with monocyte-depleted PBMC (E:T 4:1) in the presence or absence of B7-H3xCD3 or MOPCxCD3 (1 nM each). Standard calibration beads (Sigma-Aldrich, St. Louis, MO) were used to ensure analysis of equal assay volumes and to account for the number of target cells that had vanished from the culture. 7AAD (Biolegend) was used for live- and dead-cell discrimination. Measurements were performed using a FACS Canto II or FACS Fortessa (BD Biosciences, San Diego, CA) and data was analyzed using the software FlowJo (FlowJo LCC, Ashland, OR).
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