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Alexa 488 conjugated donkey anti rabbit igg

Manufactured by Thermo Fisher Scientific
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Alexa Fluor 488-conjugated donkey anti-rabbit IgG is a secondary antibody used for detecting and visualizing rabbit primary antibodies in various immunoassays and imaging applications. The antibody is conjugated to the Alexa Fluor 488 fluorescent dye, which provides bright green fluorescence upon excitation.

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35 protocols using alexa 488 conjugated donkey anti rabbit igg

1

Immunostaining of Osteoarthritis Markers

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We confirmed that, unlike a mouse rheumatoid arthritis (RA) model [37 (link)], immunostaining of TNF and IL6 was not increased in DMM surgery (Panels A and B in S2 Fig). Similarly, 10 mM LiCl had no substantial effect on expressions of TNF and IL6 in OAC cells (Panel C in S2 Fig). Sections with the narrowest interarticular space at the medial and lateral compartments were immunostained for β-catenin. First, the paraffin-embedded sections were deparaffinized and rehydrated. Then, the sections were unmasked by 10 mM sodium citrate buffer (pH 6.0) at 90°C for 15 min and were incubated with 3% H2O2 for 15 min to inactivate endogenous peroxidases. Sections were blocked with 5% goat serum in TBS-T for 1 hour at room temperature followed by overnight incubation with antibodies against β-catenin (dilution 1:100), TNF, or IL6 (dilution 1: 100 in 5% goat serum with TBS-T, #9587, CST) at 4°C. After washing with TBS-T, sections were incubated with Alexa 488-conjugated donkey anti-rabbit IgG (dilution 1: 500, Thermo Fisher Scientific) for 1 hour at room temperature. Finally, the specimens were mounted in VectaShield containing 2 μg/ml diamidino-2-phenylindole (DAPI, Vector Laboratories) and visualized using the IX71 (Olympus) microscope.
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2

Immunofluorescence Analysis of LC3 and p53

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REH cells (3,5x 104 cells per slide) were adhered to poly-L-lysine coated microscopic slides by cytocentrifugation at 370 x g for 4 min. The cells on slides were fixed in 4% PFA for 15 min at room temperature. For analyses of LC3 puncta, the cells were permeabilized with saponin (0.05%) followed by blocking in 2% FBS/PBS for 30 min. The cells were then incubated with antibody against LC3B (PM036, MBL) over-night at 4°C, followed by incubation with Alexa488-conjugated donkey anti-rabbit IgG (A-21206, Thermo Fisher Scientific) for 1 hour at room temperature. Subcellular localization of p53 was determined by incubating the slides over-night with anti-p53 (FL-393Santa Cruz), followed by incubation for 1 hour at room temperature with Cy-3 AffiniPure goat anti-rabbit IgG from Jackson Immunoresearch. For visualization of nuclei, the cells were stained with Hoechst 33258 (1 μg/ml in PBS) from Sigma Aldrich. Fiji was used for quantifying the p53 signals.
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3

Immunocytochemical Analysis of hiPSC-Derived Hepatocytes

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Immunocytochemistry of hiPSC-HLCs was performed as previously reported [12] (link), [13] (link). Samples were incubated overnight at 4 °C with primary antibodies against SOX17 (1:100; R & D Systems, AF1924), HNF4a (1:50; Santa Cruz Biotechnology, Dallas, TX, USA, sc-374229), albumin (ALB; 1:500; Bethyl, Montgomery, TX, USA, A80-229A), alpha-fetoprotein (AFP; 1:500; Sigma-Aldrich A8452), and CYP3A4 (1:100; Proteintech, Rosemont, IL, USA, 18227-1-AP). After washing, the stained samples were incubated with Alexa 488-conjugated donkey anti-goat IgG (1:500; Thermo Fisher Scientific) for SOX17 or ALB, Alexa 488-conjugated donkey anti-rabbit IgG (1:200; Thermo Fisher Scientific) for CYP3A4, or Alexa 555-conjugated goat anti-mouse IgG (1:500; Thermo Fisher Scientific) for HNF4a or AFP detection. After washing, the samples were covered with Vectashield mounting medium containing 4,6-diamidino-2-phenylindole (DAPI) (Vector Laboratories, Burlingame, CA, USA). All samples were imaged using a BZ-9000 fluorescence microscope (Keyence, Osaka, Japan).
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4

Multiplex Immunofluorescence of Epidermal Markers

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Cultured cells or tissue were fixed in 4% paraformaldehyde for 11 min followed by blocking in PBS with 2.5% normal goat serum, 0.3% triton X-100, and 2% bovine serum albumin for 30 min Primary antibodies used were Keratin 1 (Biolegend: PRB-149P) at 1:1000, Filaggrin (Abcam: ab3137) at 1:200, MKi67 (Abcam: ab16667) at 1:300, Keratin 10 (Abcam: ab9025) at 1:500, HNRNPK (Bethyl Laboratories: A300–674A) at 1:1000 for 1 h. The secondary antibodies used were Alexa 555 conjugated goat anti-mouse IgG (ThermoFisher: A11029) or Alexa 488 conjugated donkey anti-rabbit IgG (ThermoFisher: A21206) both at 1:500. Nuclear dye, Hoechst 33342 was used at 1:1000 (ThermoFisher: H3570).
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5

Immunofluorescence Staining of Cultured Cells

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Cultured cells or tissue were fixed in 4% paraformaldehyde for 11 min followed by blocking in PBS with 2.5% normal goat serum, 0.3% triton X-100, and 2% bovine serum albumin for 30 min Primary antibodies used were P63 (Rabbit, Abcam: ab124762) at 1:1000, P63 (Mouse, Abcam: Ab735) at 1:100, FOXA1 (Cell Signaling: 53528S) at 1:1000, Loricrin (Abcam: Ab198994) at 1:1000, Filaggrin (Abcam: Ab3137) at 1:200, MKi67 (Abcam: Ab16667) at 1:300, Keratin 10 (Abcam: Ab9025) at 1:500, Keratin 1 (Biolegend: 905204) at 1:500 for 1 h. The secondary antibodies used were Alexa 555 conjugated goat anti-mouse IgG (Thermo: A11029) or Alexa 488 conjugated donkey anti-rabbit IgG (Thermo: A21206) both at 1:500. Nuclear dye, Hoechst 33342 (Thermo:H3570) was used at 1:1000.
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6

Quantitative Evaluation of Pancreatic Alpha Cells

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Whole pancreata were sectioned at 12 µm on a cryostat. Four sections per block were selected for immunofluorescence starting from section #120 and separated by 30 sections (from Group C; STZ-PBS, n = 7 mice; STZ-ACVR2B:Fc, n = 7 mice). Primary antibodies were rabbit anti-glucagon (1:50, AnaSpec, Inc.) and guinea pig anti-insulin (1:200, Invitrogen). Secondary antibodies were Alexa 488-conjugated donkey anti-rabbit IgG (1:200, Molecular Probes) and Alexa 568-conjugated donkey anti-guinea pig IgG (1:200, Molecular Probes). Sections were mounted in medium containing 4′,6-diamidino-2-phenylindole (DAPI) (Vectashield, Vector Laboratories) to visualize nuclei. To quantitatively evaluate alpha cells, all glucagon-positive cells were counted in the selected sections. The total pancreas area on the same sections was measured by NIS Elements analysis software (Nikon). The density of alpha cells was calculated by dividing the total number of glucagon-positive cells in the four sections by the total area of the pancreas in the same sections. The relative total alpha cell number was calculated by multiplying the alpha cell density by the pancreas weight and dividing the STZ-ACVR2B:Fc values by the mean of STZ-PBS values.
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7

Dual Immunofluorescence for HMGB1 and Cell Markers

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Double immunofluorescence analysis was performed to detect HMGB1 and a neuronal marker (NeuN), a microglial marker (Iba1), or an astrocytic marker (GFAP) as previously described [2 (link)]. Briefly, 30-μm-thick sections were incubated overnight at 4 °C with the primary mouse anti-HMGB1 (MyBioSource, CA, USA) and rabbit anti-NeuN, rabbit anti-Iba1, or rabbit anti-GFAP (Abcam, Cambridge, MA, USA) antibodies. Then, the sections were incubated with Alexa 488-conjugated donkey anti-rabbit IgG and Alexa 594-conjugated donkey anti-mouse IgG (Molecular Probes, MA, USA) for 2 h at room temperature. Additionally, the interaction between HMGB1 and TLR3 was explored using primary rabbit anti-HMGB1 and mouse anti-TLR3 antibodies as described above. Images were captured using a Leica confocal microscope (Leica Microsystems, Buffalo Grove, IL, USA).
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8

Immunofluorescence Analysis of Skin Markers

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After the removal of the OCT compound, immunofluorescence staining was performed on 20-µm sections using polyclonal rabbit-anti-Ki67 (1:400, ab15580, Abcam), monoclonal anti-mouse-K14 (1:200, ab7880, Abcam), monoclonal anti-rabbit-phospho-STAT3 (pStat3, 1:200, #9145, Cell Signaling Technology), monoclonal anti-mouse-STAT3 (Stat3, 1:200, #9139, Cell Signaling Technology) overnight at 4 °C. Then, Alexa488-conjugated donkey-anti-rabbit IgG (1:400, A21206, Molecular Probes) or Alexa546-conjugated goat-anti-mouse IgG (1:400, A11003, Molecular Probes) was used as a secondary antibody for 3 h at room temperature. The sections were then counterstained with DAPI (1:500, Dojindo) and mounted with fluorescent mounting medium (Dako). At least three embryos of each genotype were used for each analysis.
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9

Triptolide Targets Sp1 in Prostate Cancer

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Prostate cancer cells 22Rv1 were grown in chamber slides and treated with 25 nM triptolide for 24 hr, fixed with 4% paraformaldehyde for 15 min at room temperature and permeabilized with 0.1% Triton × 100. Anti-Sp1 antibody (Cell Signaling) was used at a dilution of 1:200 for 1h at room temperature. After washing, cells were incubated with secondary anti-bodies: 1:1200 dilution of Alexa-488-conjugated donkey anti-rabbit IgG (Molecular Probes) for 1 h at 4°C. The slides were washed and mounted using Prolong Gold anti-fade agent containing DAPI (Molecular Probes). Immunofluorescence images were obtained on a Nikon Eclipse Ti confocal microscope (Nikon, Melville, NY) using a 100× oil-immersion objective.
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10

Immunofluorescence Staining of Nuclear Proteins

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The primary antibodies used were: mouse PML (1:500, SC-966, Santa Cruz), p80 coilin (1:300, #612074, BD Biosciences), hnRNPI (1:300, sc-16547, Santa Cruz), lamin A/C (1:300, sc-7292, Santa Cruz), Sp1 (1:300, sc-16547, Santa Cruz), and lamin B (1:300, sc-6216, Santa Cruz). The following secondary antibodies were used: Alexa 488-conjugated donkey anti-mouse IgG (1:250), Alexa 488-conjugated donkey anti-rabbit IgG (1:250) (Molecular Probes), Cy3-conjugated donkey anti-mouse IgG (1:1000), Cy3-conjugated donkey anti-rat IgG (1:1000), and Cy3-conjugated donkey anti-rabbit IgG (1:1000) (Jackson ImmunoResearch).
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