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S1000 pcr thermal cycler

Manufactured by Bio-Rad
Sourced in United States

The S1000 PCR Thermal Cycler is a laboratory instrument designed for performing polymerase chain reaction (PCR) amplification of DNA samples. The device precisely controls the temperature and timing of the thermal cycling process essential for the PCR technique.

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2 protocols using s1000 pcr thermal cycler

1

Degenerate Primers for Insect CYP6 Genes

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Four pairs of degenerate primers (dpE, dpF, dpG, and dpH) were designed according to the conserved amino acid sequences of insect CYP6 genes, and another pair of degenerate primers (dpA) reported by
Kasai et al. (1998) (link)
were taken for comparison (
Table 1). The amplification was performed with S1000 PCR Thermal Cycler (Bio-Rad,
www.bio-rad.com) using 2X ES Master mix Taq polymerase (CWBIO,
www.cwbiotech.com). The total reaction volume was 25 µL, including 1 µL cDNA, 1 uL 10 µM/L forward and reverse primer respectively, 12.5 µL 2X ES Master mix Taq polymerase, and 9.5 µL ddH2O. The PCR program was conducted under the following conditions: an initial denaturation at 94°C for 1 min followed by 30 cycles of 94°C for 30 sec, 45°C for 30 sec, and 72°C for 1 min, and a final extension at 72°C for 10 min. The PCR products were then separated by 1.5% agarose gel electrophoresis and stained with ethidium bromide (EB). The bands of the expected size (250 bp, 270 bp, and 420 bp) were excised and recovered using Universial DNA Purification Kit (Tiangen Biotech).
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2

Genomic DNA Extraction and SNP Genotyping

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Genomic DNA was isolated from whole blood using the Blood Genomic DNA Kit (Tiangen Biotech, Beijing, China) according to the manufacturer protocols. Genotypes of SNP sites in the target genes were detected by direct sequencing of the polymerase chain reaction (PCR) product. The amplification reaction was performed in the S-1000 PCR Thermal Cycler (Bio-Rad, Hercules, CA, USA). The primer sequences used in this study are listed in Table 1. The PCR conditions were set as follows: an initial melting step at 94°C for 3 min, 35 cycles of denaturation at 94°C for 30 s, annealing at 58°C for 30 s, and extension at 72°C for 45 s, and a final elongation step at 72°C for 7 min. The PCR products were directly sequenced using an ABI 3500xL automated sequencer (Applied Biosystems, Foster City, CA, USA).
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