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8 protocols using anti aqp1

1

Immunohistochemical Analysis of AQP1 Expression

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All samples examined were obtained from formalin-fixed, paraffin-embedded pieces. Slices of 5 μm were cut with a microtome and mounted on microscope slides. Immunohistochemical samples were obtained from paraffin sections that were immersed in xylene and rehydrated through a series of decreasing dilutions of ethanol. Blocking of endogenous peroxidase, epitope retrieval and immunostaining procedure were done as previously reported (López-Campos et al., 2011 (link)). Primary antibody, rabbit polyclonal anti-AQP1, (1:500 dilution, Abcam, Cambridge, UK) was used overnight, for the developing of brown precipitates we then used the two steps system EnVision + Dual Link System-HRP (DakoCytomation, Dako Denmark). Qualitative analysis was made by two independent observers. We assigned zero for no staining on the sample, low positive (<25% of the sample stained), medium positive (50% of the sample stained) and high positive (>75% of the sample stained) values (Tables 1, 2). Immunoreactivity was analyzed in terms of surface and type of cells showing AQP1 on their surface. Samples were photographed using an AX70-Olympus microscope equipped with an Olympus DP10 camera (Denmark).
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2

Western Blot Analysis of Protein Markers

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The protein collecting and western blotting were performed according to the protocol. The primary antibodies were as follows: anti-p-PKM2 (Tyr105) (cat: 3827 s, CST), anti-PKM2 (cat: 4053 s, CST), anti-Na/K-ATPase (cat: 3010 s, CST; cat: ab76020, Abcam), anti-AQP1 (cat: ab168387, Abcam), anti-KIM-1 (cat: ab47635, Abcam), cleaved-caspase3 (cat: 9664 s, CST), caspase 3 (cat: 9662 s, CST), anti-RIP1 (cat: 3493 s, CST), anti-p-RIP3 (cat: ab222320, Abcam), anti-RIP3 (cat: 15828 s, CST), anti-p-MLKL (cat: 37333, CST), and anti-MLKL (cat: 37705, CST), anti-GPX4 (cat: ab125066, Abcam), anti-p-DRP1 (cat: 3455, CST), anti-DRP1 (cat: ab184247, Abcam), anti-MYH9 (cat: 11128-1-AP, Proteintech), anti-VDAC (cat: 4866 s, CST; cat: ab14734, Abcam), anti-TBP (cat: ab818, Abcam), and anti-α- tubulin (cat: T9026, Sigma Aldrich).
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3

Kidney Immunostaining and Imaging Protocol

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Kidney sections and fixed cells were immunostained as described previously [10 (link)]. For immunochemical staining, sections were stained with anti-AQP2 (Cat. No. AQP-002; Alomone Laboratories) antibody. Hematoxylin was used for counter-staining. For immunofluorescence, the following antibodies were used: anti–acetylated (ac)-α-tubulin (Cat. No. T7451; Sigma-Aldrich), anti–Na/K-ATPase (Cat. No. ab76020; Abcam), anti-AQP1 (Cat. No. AQP-001; Alomone Laboratories), and anti-AQP2 (Cat. No. AQP-002). To detect cell nuclei, DAPI was applied to samples. Images were captured using a Leica microscope (DM2500; Wetzlar).
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4

Western Blot Analysis of Lung Proteins

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Lung tissues were homogenized in RIPA buffer with the presence of protease inhibitors (Roche, Indianapolis, IN, U.S.A.), and protein concentrations were determined. Samples were loaded on to 10% gels for sodium dodecyl sulfate/polyacrylamide gel electrophoresis and transferred to polyvinylidene fluoride membranes (Millipore, Billerica, MA, U.S.A.) by means of the wet transfer method. The membranes were blocked with 5% nonfat milk, and then incubated overnight at 4°C with anti-AQP1 (Abcam, Massachusetts, U.S.A.), anti-AQP5 (Abcam, Massachusetts, U.S.A.), anti-BiP (Proteintech, Rosemont, U.S.A.) and anti-CHOP (Abcam, Massachusetts, U.S.A.) antibody. Anti-rabbit HRP–conjugated IgG was used to detect the bound antibodies. The binding of the specific antibody was visualized using enhanced chemiluminescence (Thermo Scientific, Tewksbury, MA, U.S.A.).
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5

Quantitative Western Blotting Protocol

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Western blotting (WB) was conducted following a previously described protocol (Barik et al., 2014 (link)). Total protein was extracted using RIPA Lysis Buffer (Beyotime, China), and the protein concentration was determined using the Bicinchoninic Acid (BCA) Protein Assay (Beyotime, China). SDS-PAGE was performed to separate the protein samples, which were then transferred to a nitrocellulose membrane, blocked, and probed with primary antibodies, including anti-AQP1, anti-Vimentin (1:1000; Abcam, Cambridge, UK), E-Cadherin (1:1000; CST, USA), N-Cadherin (1:1000; CST, USA), and anti-β-actin (1:1000; Abcam, Cambridge, UK). The membranes were subsequently incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies (1:1000; Invitrogen, Waltham, MA, USA). Immunoreactive protein bands were visualized using an HRP chemiluminescence detection reagent (ECL; Thermo Fisher Scientific), and the blots were imaged using a ChemiDoc MP imaging system (Bio-Rad, Hercules, CA, USA). The grayscale values were quantified by ImageJ.
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6

Benzo[a]pyrene Dose-Dependent Regulation of AQP1 in C6 Cells

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After pretreatment with benzo[a]pyrene (0,5,10,50,100 and 200 µM) for various lengths of time, C6 cells were lysed in RIPA lysis buffer (Beyotime Institute of Biotechnology) and centrifuged at 12,000 × g for 10 min at 4°C. Protein concentration was measured using a BCA assay (Pierce; Thermo Fisher Scientific, Inc.), according to the manufacturer's instructions. A total of 30 µg protein from each sample was resolved via 10% SDS-PAGE. The proteins were then transferred to a nitrocellulose membrane at 100 V for 120 min. After blocking with 5% non-fat dry milk for 1 h at room temperature, the membranes were incubated with anti-AQP1 (cat no. ab122821; 1:100; Abcam, Cambridge, MA, USA) and anti-GAPDH (cat no. ab8245; 1:1,000; Abcam) antibodies overnight at 4°C. After 3 washes with PBS, the membranes were incubated with goat anti-rabbit (cat no. 32460; 1:1,000; Invitrogen; Thermo Fisher Scientific, Inc.) or goat anti-mouse IgG (cat no. A0216; 1:1,000; Beyotime Institute of Biotechnology) secondary antibodies conjugated with horseradish peroxidase for 1 h at room temperature. Detection was performed using the ChemiDoc™ XRS+ enhanced chemiluminescent system (Bio-Rad Laboratories, Inc.).
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7

Immunohistochemical Analysis of Kidney Tissue

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Kidney tissue samples were fixed in 10% formalin for 24–48 h and embedded in paraffin after standard processing procedures for immunohistochemical analysis. After washing with PBS and cell permeabilization with 0.3% Triton, the slides were blocked with 10% goat serum and incubated overnight at 2–8 °C with the primary anti-Human Nuclear Antigen antibodies (anti-HNA, 1:100, Abcam, USA), anti-AQP1 (1:100, Abcam, USA), and anti-AQP2 (1:100, Abcam, USA). The slides were then incubated for 1 h with secondary antibodies. Finally, all slides were counterstained with DAPI and analyzed using fluorescent microscopy (Olympus) after adding glycerol and PBS solutions.
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8

Differentiation of Human ESCs and Renal Progenitor Cells

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For this research, human ESCs (Royan H5) at passages 40–60 and CD133+CD24+ renal progenitor cells were purchased from Royan Institute. while Minimum Essential Medium were obtained from Thermo Fisher (Thermo Fisher Scientific, Massachusetts, USA). In this study we used fetal bovine serum (FBS, Gibco Life Technologies, USA), penicillin and streptomycin (Gibco Life Technologies, USA), osteogenic differentiation medium (Gibco Life Technologies, Germany) and alkaline phosphatase (Sigma-Aldrich, USA), alizarin red dye (Sigma-Aldrich, USA), oil red dye (Sigma-Aldrich, USA), knock-out serum replacement (Gibco), non-essential amino acids (Gibco Life Technologies, USA), glutamine (Gibco Life Technologies, USA), β-mercaptoethanol (Sigma-Aldrich, USA), basic fibroblast growth factor (bFGF, Sigma- Aldrich, USA), Accumax (Sigma-Aldrich, USA), bovine serum albumin (BSA, Sigma- Aldrich, USA), propidium iodide (PE) -conjugated mouse anti-human CD133 (Miltenyi Biotec, USA) and fluorescein isothiocyanate (FITC) -conjugated mouse anti-human CD24 (Abcam, USA) antibodies, primary anti-Human Nuclear Antigen antibodies (anti-HNA, Abcam, USA), anti-AQP1 (Abcam, USA), and anti-AQP2 (Abcam, USA). Additionally, TNF α, IL-1, IL-2, IL-6, IL-10, TGF-β, and IFN γ were obtained from Sigma Aldrich, USA.
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