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Mwco spin concentrators

Manufactured by Merck Group

MWCO spin concentrators are laboratory devices used to concentrate and purify samples through a process called ultrafiltration. These concentrators utilize a semi-permeable membrane with a specific molecular weight cut-off (MWCO) to selectively retain molecules above a certain size while allowing smaller molecules to pass through. The core function of MWCO spin concentrators is to concentrate and purify samples, such as proteins, peptides, or other macromolecules, by removing unwanted smaller components from the solution.

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3 protocols using mwco spin concentrators

1

Expression and Purification of MBP-BRC4 Fusion Protein

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The plasmid pRSFDuet2-MBP-BRC4
(KanR), encoding a C-terminal fusion of BRC4 to maltose binding protein
(MBP), bearing an N-terminal His6-tag was generously provided
by Dr. L. Pellegrini and M. Longo, Cambridge University.17 Rosetta2 (DE3) cells (CmR) were transformed
with pRSFDuet2-MBP-BRC4. A 10 mL preculture was prepared and used
to inoculate 500 mL of LB with appropriate antibiotics. After incubation
at 37 °C (200 rpm) until an OD600 of 0.6 was reached,
the cells were induced with 400 μM IPTG. After a further 5 h
at 37 °C (200 rpm) the cells were harvested. The pellet was resuspended
in 15 mL of phosphate buffered saline (PBS, pH 7.5) and stored at
−20 °C.
For protein purification, the cells were
thawed, 0.5 μL benzonase added and lysed by sonication. The
solution was centrifuged for 40 min at 6,500 rpm. The supernatant
was loaded on a Ni-NTA (Qiagen) column previously equilibrated in
PBS. The column was washed with 5 bed volumes of 10 mM imidazole,
PBS pH 7.5, and 5 bed volumes of 20 mM imidazole in PBS pH 7.5 prior
to elution with 2 bed volumes of 250 mM imidazole in PBS pH 7.5. The
protein was concentrated with 30 MWCO spin concentrators (Millipore),
while the buffer was exchanged to 20 mM CHES pH 9.5, 100 mM NaCl,
1 mM EDTA. The purified protein was stored at 4 °C.
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2

Fluorescent Labeling of dCas9 Proteins

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For SNAP tag labelling, dCas9-SNAP protein samples were incubated with SNAP-Surface Alexa Fluor 647 (NEB S9136) at 37 °C for 30 min. For CLIP tag labelling, CLIP-Cell TMR star substrate or CLIP-Surface 488 substrate (NEB S9219 and S9232) was reacted with dCas9-CLIP proteins at 37 °C for 60 min. The excess fluorescent SNAP or CLIP substrate was removed with three washes using 10 K molecular weight (MWCO) spin concentrators (Millipore). Fluorescent dCas9 protein was stored in 20 mM HEPES pH 7.5, 150 mM KCl, 1 mM TCEP, 10% glycerol. Protein concentration and labelling efficiency were determined by measuring absorption specta using a NanoDrop 2000 (Thermo Scientific). Calculated extinction coefficients at 280 nm are 141,670 and 140,180 for dCas9-SNAP and dCas9-CLIP respectively. Fluorescent dCas9 protein was flash-frozen in liquid nitrogen and stored at − 80 °C.
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3

Fluorescent Labelling of dCas9 Proteins

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For SNAP tag labelling, dCas9-SNAP protein samples were incubated with SNAP-Surface Alexa Fluor 647 (NEB S9136) at 37°C for 30 minutes. For CLIP tag labelling, CLIP-Cell TMR star substrate or CLIP-Surface 488 substrate (NEB S9219 and S9232) was reacted with dCas9-CLIP proteins at 37°C for 60min. The excess fluorescent SNAP or CLIP substrate was removed with three washes using 10 K molecular weight (MWCO) spin concentrators (Millipore).
Fluorescent dCas9 protein was stored in 20 mM HEPES pH 7.5, 150 mM KCl, 1 mM TCEP, 10% glycerol. Protein concentration and labelling efficiency were determined by measuring absorption specta using a NanoDrop 2000 (Thermo Scientific). Calculated extinction coefficients at 280nm are 141,670 and 140,180 for dCas9-SNAP and dCas9-CLIP respectively. Fluorescent dCas9 protein was flash-frozen in liquid nitrogen and stored at -80°C.
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