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Short hairpin rna shrna

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Short hairpin RNA (shRNA) is a laboratory tool used to temporarily suppress or 'knock down' the expression of a specific gene. shRNA is a small, double-stranded RNA molecule that mimics the structure of naturally occurring microRNA. When introduced into cells, shRNA can trigger the RNA interference (RNAi) pathway, leading to the degradation or translational repression of the target mRNA, effectively reducing the production of the corresponding protein.

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3 protocols using short hairpin rna shrna

1

MITF Knockdown via shRNA Lentivirus

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Short hairpin RNA (shRNA) targeting the coding sequence of MITF and control shRNA were purchased from Santa Cruz. Lentiviruses encoding control shRNA and MITF shRNA were produced in HEK-293T cells by transient transfection of lentiviral-based vectors and their packaging vectors psPAX2 and pMD2.G. The virus was collected, filtered through a 0.45 µm syringe filter after 48 h, and the M397 cells were spin-infected with viral supernatant supplemented with 10 µg/mL polybrene at 900 g and 30 °C for 90 min. The transduced cells were selected using puromycin, starting at 3 days post transduction.
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2

Lentiviral Vector-Mediated RGS7 Modulation

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1-wk-old WT mice received a single intraventricular injection of 4.5 × 108 lentiviral vectors containing scramble or RGS7-targeted Short hairpin RNA (shRNA) (Santa Cruz Biotechnology) in a 40 µL volume according to a previously published protocol (51 (link)) or 70 μL of lentivirus containing 2 × 108 particles of either mRGS7-Lenti or a control empty vector virus. After injection, mice were returned to their mothers until weaning and allowed to age to adulthood (8 to 10 wk) for subsequent experiments. RGS7 knockdown and OE were verified via immunoblotting. Following intracardiac injection, body weight (1×/wk) and food intake (1 to 2×/wk) were monitored. No notable alterations in animal weight, food intake, or general well-being were found.
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3

Targeted Gene Deletion Cell Lines

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The establishment method of targeted gene‐deletion cell lines that participated in this study were constructed as described previously.[17, 29] Briefly, THLE2 cell lines with ZDHHC1‐ZDHHC24 ablation were established by CRISPR‐Cas9 system. The designed small guide RNA (sgRNA) for human ZDHHCs gene were established and cloned into lentiCRISPR v2 vectors(Addgene, Watertown, MA, USA) to create the Cas9/sgRNA‐loaded lentivirus. Small guide RNA (sgRNA) for establishment of knockout THLE2 cells were obtained from Santa Cruz Biotechnology, Inc., as described in Table S2, Supporting Information. Oligonucleotide for the sgRNAs were packaged into lentiCRISPR v2 vectors digested with BsmBI restriction enzyme. The obtained cell clones‐containing gene deficiency were distinguished by western blotting. Mouse primary hepatocyte with Zdhhc3 deletion cells were directly isolated from global Zdhhc3‐deficient mice. For the establishment of mouse primary hepatocytes with Zdhhc1‐Zdhhc25 knockdown, short hairpin RNA (shRNA) for knockdown expression of Zdhhcs were obtained from Santa Cruz Biotechnology, Inc., as described in Table S3, Supporting Information, were packed into adenovirus (Addgene, Watertown, MA, USA), respectively.
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