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51 protocols using leibovitz s l 15 medium

1

Inactivated TiLV Vaccine Production Protocol

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The TiLV inactivated vaccines were prepared as described previously by Mai et al. (2021). Briefly, TiLV strain TH-2018-K, which was isolated from Nile tilapia during a TiLV outbreak in Thailand in 2018 [20 (link)], was propagated on E11 cells, in Leibovitz’s L15 medium (Sigma, Saint Louis, MO, USA) containing 5% fetal bovine serum, until a cytopathic effect (CPE) of approximately 80% of the cell monolayer was achieved. The supernatant containing the virus was collected and clarified to remove cell debris, by centrifuging at 4500× g for 5 min at 4 °C. Virus concentration was determined using 50% tissue culture infectious dose (TCID50/mL) [30 (link)]. The virus was inactivated by either heating at 60 °C for 2.5 h or incubating in a 0.006% formalin solution (16.2 µL formalin 0.37% in 1X phosphate-buffered saline [1× PBS, 137 mM NaCl, 2.7 mM KCl, 10 mM Na2HPO4 and 1.8 mM KH2PO4, pH 7.4] per 1.0 mL viral stock) at 25 °C for 24 h. Viral infectivity was tested on E11 cells and successful inactivation was confirmed when no CPE was observed after 7 days. The vaccines were stored at 4 °C until used. The virus concentration was determined to be 1.8 × 107 TCID50 per mL before being used. All chemicals used were purchased from Merck (Kenilworth, NJ, USA).
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2

Culturing Breast Cancer Cell Lines

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MCF 10A (non-tumorigenic), MCF7 (ESR + BC), and MDA-MB-231 (triple-negative phenotype) breast cells lines were obtained from ATCC and cultured with Dulbecco’s Modified Eagle Medium (DMEM) (Cultilab), Iscove’s Modified Dulbecco’s Medium (IMDM) (Cultilab), and Leibovitz’s L-15 Medium (Sigma Aldrich), respectively. MCF 10A was supplemented with 10% of fetal bovine serum (FBS), 20 ng/mL of epidermal growth factor (EGF), 500 ng/mL of hydrocortisone, 10 µg/mL of insulin, and 50 μg/L of gentamycin. The malignant lineages were supplemented with 10% of FBS and 50 μg/L of gentamycin. All lineages were incubated at 37 °C in a humidified atmosphere containing 5% CO2 atmosphere until they reached 80% of confluence.
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3

Tracking HIV-1 Gag Protein Dynamics

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For protein mobility measurements inside and outside Gag assembly sites, 3 × 105 Jurkat T-cells were suspended in in 200 mL Leibovitz’s L-15 medium (Sigma-Aldrich) 72 h post-infection with NL4.3 HIV-1 Gag.iGPF. Infected cells were stained for Env in suspension at 16 °C by incubation with 2G12 Fab fragments and anti-human Abberior STAR RED (KK114) conjugated Fab fragments for 1 h each in 0.5% BSA/L-15 medium. Cells were then washed three times in L-15 medium, resuspended in 250 mL of L-15 medium and adhered to solution poly-L-lysine (0.1 mg/mL) (Sigma-Aldrich)-coated glass surface of eight-well Ibidi m-Slides (Ibidi, Gräfelfing, Germany) at 37 °C 30 min prior to microscopy measurements.
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4

Isolation of Mouse Inner Hair Cells

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Following anesthesia by pentobarbital sodium (50 mg/kg intraperitoneal injection), C57BL/6J mice were killed by broken neck. The bulla was removed and the cochleae exposed. Then, the method of IHC isolation described by Liu et al. (2014) (link) was utilized with several modifications. Basilar membrane with the organ of Corti was dissected from apex to base and divided into the apical, median, and basal turn (Figure 1A). Only apical and basal parts of the sensory epithelium were transferred separately to a 35-mm Petri dish containing 400 μl Leibovitz’s L-15 medium (Sigma, United States) and 400 ug Collagenase IV (Sigma, United States) for digestion. After 8 min incubation at room temperature, the tissue was transferred to another dish containing 500 μl enzyme-free Leibovitz’s L-15 medium. The hair cells were separated after gentle trituration of the basilar membrane with a 200-μl pipette tip. The suspension containing IHCs was transferred to a 0.6 cm2 coverslip, and 100 μl PBS was added to the adjacent coverslip for cleaning and removal of the extracellular debris before observation under an inverted microscope (Olympus IX51, Japan).
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5

Investigating SDF-1α/CXCR4 Signaling Pathway

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TPD7 was from the Research and Engineering Center for Natural Medicine, Xi’an Jiaotong University. LEIBOVITZ’S L15 medium, MG132 and chloroquine were purchased from Sigma-Aldrich (St. Louis, MO, USA). Foetal bovine serum (FBS) was obtained from Lanzhou national hyclone Bio-Engineering Co., Ltd (Lanzhou, China). Recombinant human SDF-1α was purchased from PeproTech (Rocky Hill, NJ, USA). Antibodies against CXCR4 were obtained from Abcam (Burlingame, CA, USA). Matrix metalloproteinase (MMP)-2 rabbit mAb and MMP-9 rabbit mAb were obtained from Epitomics (Burlingame, CA, USA). p44/42 MAPK (ERK1/2) rabbit mAb and p-p44/42 MAPK (p-ERK1/2) rabbit mAb were purchased from Cell Signaling (Danvers, MA, USA). Horseradish Peroxidase (HRP)-conjugated Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) monoclonal antibody was from Proteintech Group (Chicago, IL, USA). Total RNA extraction kit was from Fastagen (Fastagen, Shanghai, China). PrimeScript RT Master Mix Perfect Real Time Kit (DRR036A) and SYBR Premix Ex Taq II were from TaKaRa (Dalian, China). Lipofectamine 2000 was from Invitrogen (Carlsbad, CA, USA). Other reagents used were analytical grades.
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6

Culturing Melanoma, Breast Cancer, and Cancer Stem Cells

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Melanoma non-stem cells (MNSCs) were cultured in Leibovitz’s L-15 medium (Sigma, USA) supplemented with 10% fetal bovine serum (FBS) at 37°C with 100% humidified atmosphere. Breast cancer non-stem cells (BCNSCs) were cultured in DMEM basic medium (Sigma, USA) supplemented with 10% FBS at 37°C with 5% CO2 humidified atmosphere. Cancer stem cells were cultured in DMEM/F-12 medium (Invitrogen, USA) supplemented with 20 ng/mL epidermal growth factor (Beyotime Biotechnology, Jiangsu, China), 10 ng/mL basic fibroblast growth factor (Beyotime, China), 5 μg/mL insulin (Beyotime, China), and 2% B-27 (Sigma, USA) at 37°C in a humidified atmosphere with 5% CO2.
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7

Culturing and Characterizing Breast Cancer Cell Lines

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Breast cancer cell lines MCF7, T47D, HCC1954, MDA-MB-453 and SK-BR-3 were purchased from ATCC and SUM149 was purchased from Asterland. MCF7, T47D, HCC1954 and SK-BR-3 were cultured in RPMI medium 1640 (Gibco, USA) with 10% FBS (Gibco, USA). MDA-MB-453 was cultured in Leibovitz’s L-15 medium (Sigma, USA) supplemented with 10% FBS. SUM149 was cultured in Ham’s F-12 medium (Invitrogen, USA) supplemented with 5% FBS, 5 μg/mL of insulin (Beyotime, China) and 1 ug/mL of hydrocortisone (Sigma, USA). MCF7, T47D, HCC1954, SUM149 and SK-BR-3 cells were cultured at 37 °C in a humidified atmosphere with 5% CO2 and MDA-MB-453 was cultured at 37 °C with 100% humidified atmosphere. The cell lines were profiled routinely by short tandem repeat analysis.
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8

Cultivation of Colorectal Cell Lines

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A normal colorectal cell line (FHC) was purchased from the Institute of Biochemistry and Cell Biology of the Chinese Academy of Sciences (Shanghai, China), and 5 human CRC cell lines (HT29, LoVo, HCT116, SW480, and RKO) were purchased from Lonza Biologics (Hayward, CA, USA). SW480 cells were cultured in Leibovitz’s L-15 medium (Sigma, St. Louis, MO, USA; L1518), HT29 cells were cultured in MCCOYS’ 5A medium (Sigma, M9309), and FHC, HCT116, LoVo, and RKO cells were cultured in RPMI 1640 medium (Hyclone, Logan, UT, USA; SH30809.01B). All media were mixed with 10% fetal bovine serum (FBS, BI, cat. no. 04-001-1A) and antibiotics (100 units/mL penicillin and 100 mg/mL streptomycin). All cells were cultured at 37 °C in a humidified atmosphere containing 5% CO2.
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9

Curcuma wenyujin Cytotoxicity Evaluation

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Chloroauric acid trihydrate (HAuCl4·3H2O) (99.9%), Eagle Minimum Essential Medium, Leibovitz’s L-15 medium, Fetal Bovine Serum, Trypsin, Antibiotic-Antimycotic solutions, DMSO, MTT, and all other chemicals of high quality were purchased from Sigma Aldrich Co. (St. Louis, MO, USA). Curcuma wenyujin was freshly purchased from the local market.
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10

Cell Line Cultivation and Characterization

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MDA-MB 231 cells were acquired from DSMZ (Braunschweig, Germany), MDA-MB 231 Tripz 200c and MDA-MB 231 Tripz Ctrl were generated in our lab [37 (link)]. All MDA-MB 231 cells were cultured at 37°C and 0% CO2 in Leibovitz’s L-15 medium (Sigma-Aldrich) supplemented with 10% fetal calf serum (FCS, Gibco, ThermoFisher Scientific, Hanover Park, IL, USA). MCF7 wildtype cells were acquired from Cell Line Service (Eppelheim, Germany) and cultured at 37 °C and 5% CO2 in high glucose DMEM (Sigma-Aldrich) supplemented with 10% FCS (Gibco, ThermoFisher Scientific). The MCF7 KO 200c clones M1, M2 and M3 were generated in our lab as previously described [21 (link)] and cultured according to parental MCF7 (wt) cells. MCF7 Tripz 200c sponge cells were also generated in our lab. A549 Tripz 200c and T24 Tripz 200c were generated in our lab and cultured in low glucose DMEM (Sigma-Aldrich) supplemented with 10% FCS (Gibco, ThermoFisher Scientific) at 37 °C and 5% CO2. All cells were tested mycoplasm free. Further information on the generation of the cell lines can be found in Appendix A.
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