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15 protocols using anti cd90 fitc

1

Cell Cycle Analysis of Irradiated Co-Cultures

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The day before irradiation, cells were placed in 24-well plates at density 4 × 105 cancer cells per well (monocultures) or 2 × 105 cancer cells and 2 × 105 normal cells per well (co-cultures). Three days after irradiation, cells were detached by 0.25% trypsin and washed with PBS-. Cells were fixed and permeabilized with 70% ice-cold ethanol and stored at −20 °C until further analysis. Next, cells were washed with PBS and incubated with anti-CD90 FITC (co-cultures of FaDu with Wi-38 cells (BioLegend, San Diego, CA, USA), anti-CD10 APC (co-cultures of A253 with Wi-38, BioLegend) and anti-CD31 FITC (co-cultures with HUVECs, BD Biosciences, San Jose, CA, USA) for 30 min in dark. Then, cells were incubated in PBS- containing RNase A (1 mg/mL, (Qiagen, Venlo, Netherlands)) and propidium iodide (PI, 1 mg/mL, (Cayman Chemical, MI, USA)) for 1 h at 37 °C. The DNA content of cancer cells was analyzed using BD FACSCanto™ II flow cytometer.
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2

Quantification of CCL5 in HCC, Cirrhosis, and Healthy Serum

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Human CCL5 concentration in the serum of the HCC patients, liver cirrhosis patients and healthy people as well as in the CM of CAFs and PTFs were determined with CCL5 ELISA kit (P13501, RayBiotech) under the guidance of instruction. The following antibodies were used for cytometry: anti-CD105-FITC (800505, Biolegend, San Diego, CA, USA), anti-CD73-APC (344005, Biolegend), anti-CD90-FITC (328170, Biolegend), anti-CD44-FITC (338803, Biolegend), anti-CD34-FITC (343503, Biolegend), anti-CD45-FITC (982316, Biolegend), anti-HLA-DR-FITC (980402, Biolegend) and anti-CD31-APC (303115, Biolegend). The cells staining was performed under manufacturer’s protocol and identified by a flow cytometer (FACSCanto II, BD, USA). FlowJo software (Version X; TreeStar, Ashland, OR, USA) was used to data analysis.
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3

Immunophenotypic Characterization of hUC-MSCs

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P2 hUC-MSCs were purchased from Cyagen. The cell pellet was cultured in an expansion medium composed of the human umbilical cord mesenchymal stem cell basal medium (HUXUC-01001, Cyagen, China), supplemented with 10% human umbilical cord mesenchymal stem cell cell-qualified fetal bovine serum, 1% glutamine, and 1% penicillin-streptomycin (Cyagen), at 37°C, with 5% carbon dioxide in a fully humidified environment.
Native hUC-MSCs (at P5) were suspended at a concentration of 1 × 106 cells/mL, washed twice in phosphate-buffered saline (PBS), and then incubated for 30 min at 4°C in the dark with the following anti-human antibodies conjugated with fluorescein isothiocyanate (FITC) or phycoerythrin (PE): anti-CD31-PE (303105), anti-CD45-PE (368509), anti-CD34-PE (343605), anti-CD44-FITC (338803), anti-CD90-FITC (328107), and anti-CD105-FITC (328107; all from BioLegend). After 30 min, cells were washed and resuspended in 300 mL Cell Fix (BD). PE-conjugated IgG1 and FITC-conjugated IgG1 were used as isotype controls (R&D Systems Inc. and Santa Cruz Biotechnology Inc.). Immunophenotyping of hUC-MSCs was performed by flow cytometry.
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4

Multiparametric Flow Cytometry of Infiltrating Immune Cells

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In in vivo experiments, mice were sacrificed after tMCAO. The BALF was centrifuged at 500 g to collect cells. After being washed with PBS, cells were fixed and permeabilized (Invitrogen, Intracellular Fixation & Permeabilization Buffer Set), then stained with intracellular antibodies. The following antibodies were used: anti‐CD45‐BV421 (Biolegend, 103 134, clone: 30‐F11, 1:400), anti‐ F4/80‐AF488 (Biolegend, 123 120, clone: BM8, 1:400), anti‐LY6G‐APCCy7 (Biolegend, 108 424, clone: RB6‐8C5, 1:400), anti‐CD11c‐APC (Biolegend, 117 310, clone: N418, 1:400), anti‐CD3‐PECy7 (Biolegend, 100 220, clone: 17A2, 1:400), anti‐CD19‐PE (Biolegend, 152 408, clone: 1D3/CD19, 1:400), anti‐CD45‐PerCPCy5.5 (Biolegend, 368 504, clone: 2D1, 1:400), anti‐CD90‐FITC (Biolegend, 328 108, clone: 5E10, 1:400), anti‐CD34‐APC (Biolegend, 343 509, clone: 581, 1:400), and anti‐CD29‐PE (Biolegend, 303 004, clone: TS2/16, 1:400). Cell viability of BMDM was assessed using the Annexin V‐APC/PI apoptosis Detection Kit (KeyGEN, KGA1030‐100) according to manufacturer' s instructions.
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5

Characterizing MSC Surface Markers and Apoptosis

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To characterize the expression of surface markers, the MSCs were immune-stained and detected by flow cytometry analysis. Antibodies used in this detection are anti-CD73-PE, anti-CD90-FITC, anti-CD105-PE, anti-CD14-FITC, anti-CD34-FITC, anti-CD19-PE, anti-CD45-APC and anti-HLA-DR-PE (Biolegend, San Diego, CA, USA).
To assess the apoptotic rates, H9c2 cells were seeded in a 6-well plate at 30,000 cells/well for 24 h and then desired treatments were performed for 24 h. Cells were stained using an Annexin V/PI staining kit (Beyotime, Shanghai, China) following the manufacturer’s instructions and detected by flow cytometry (BD Biosciences, Franklin Lakes, NJ, USA).
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6

Characterization of Adipose-Derived Stem Cells

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Flow cytometry was used to observe the ADSC phenotypes. Passage 3 ADSCs were trypsinized and incubated with anti-CD34-PE, anti-CD44-PE, anti-CD73-FITC, anti-CD90-FITC, and anti-HLA-DR-PE (Biolegend, San Diego, CA, USA). After three washes with PBS, the fluorescence of ADSCs was observed. To verify adipogenic differentiation and osteogenic differentiation, ADSCs at passage 3 were incubated separately with adipogenic and osteogenic differentiation medium (Gibco, United States) following the supplier’s instructions for 2 or 3 weeks. The induced cells were stained with Oil Red O and Alizarin Red respectively and microscopically imaged.
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7

Isolation and Characterization of Mouse Synovial Cells

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Cells from mouse synovium were obtained as described above for cell culture, with the addition of DNase I (1 mg/ml; Sigma #DN25) during collagenase digestion. Cells were then resuspended in red cell lysis buffer for 3 min at room temperature, and red cell lysis was stopped by adding 20 ml of cold PBS. Cells were then centrifuged and stained with flexible viability dye eFluor 780 (Invitrogen #65-0865-14) at 1 μg/ml in PBS for 20 min on ice to discriminate live and dead cells. FC receptor was blocked using CD16/CD32 specific antibody (Invitrogen, #14-0161-85) for 20 min on ice. Cells were then incubated with primary antibodies or isotype controls at 1 μg/ml in FACs buffer (PBS 1%FBS 2 mM EDTA) for 20 min at 4°C. Antibodies used were: anti-CD31PE (Invitrogen, #12-0311-81), anti-CD45-PE (Biolegend, #103106), anti-CD90-FITC (Biolegend, #105316), anti-PDPN-A647 (Biolegend, #156204), anti-rat IgG2b-PE (BD bioscience #25393), anti-rat IgG2a-PE (Biolgend, # 400508), anti-rat IgG2b-FITC (Biolegend #400634) and anti-rat IgG2a-APC (Biolegend, #400512). Cell sorting was performed using FACS Aria III or FACS Aria IIu (all from BD), data were analyzed with FlowJo software 10.7.1.
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8

Isolation and Purification of Cardiac PDGFRα+ Mesenchymal Stem Cells

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Human PDGFRα + cMSCs were isolated by explant culture and purified by fluorescence-activated cell sorting as previously described17 (link). Briefly, frozen left ventricular samples (~100–200 mg) were removed from liquid nitrogen and quickly thawed by washing twice with ice cold DPBS solution. The tissue was minced into small segments and then placed in 6-well plates coated with 0.1% (wt/vol) gelatin. All explants were cultured in MEMα medium (Sigma-Aldrich) supplemented with 20% FBS (Sigma-Aldrich), 2 mM L-glutamine and 1x penicillin-streptomycin (Sigma-Aldrich), in a 5% CO2 humidified incubator at 37 °C. The culture media was replaced every 2–3 days. After 2–3 weeks, the outgrowth of cells was dissociated with trypsin-EDTA (Sigma-Aldrich) and stained with anti-PDGFRα antibody-APC (R&D; 1:10), anti-CD31-PE (R&D; 1:20) and anti-CD90-FITC (BioLegend; 1:20). The cells were then sorted for PDGFRα+/CD90+/CD31 fraction using Influx machine (BD Biosciences), as described previously17 (link).
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9

Isolation and Characterization of ADSCs

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Human adipose tissues and foreskins were obtained in accordance with procedures approved by the Ethics Committee at the Tongji Medical Collage of Huazhong University of Science and Technology. Primary fibroblasts were isolated from foreskins derived from routine pediatric circumcisions, using previously described protocols [26 (link)]. ADSCs were isolated and cultured in accordance with our established protocol [27 (link)]; ADSCs at passages 3–8 were used for experiments. Flow cytometry was conducted to identify ADSC phenotypes. ADSCs were incubated for 1 h with anti-CD34-BV421, anti-CD44-APC, anti-CD105-PE, anti-CD73-FITC, anti-CD31-FITC, and anti-CD90-FITC antibodies (all from Biolegend, San Diego, CA, USA); fluorescence was observed thereafter. For multi-lineage differentiation potential assays, ADSCs were incubated separately with adipogenic medium and osteogenic differentiation medium (Cyagen Biosciences Inc., Guangzhou, China). Cells were stained with Oil Red O and Alizarin Red, respectively. Subsequently, the stained cells were imaged using a microscope.
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10

Phenotypic Characterization of Dental and Bone Stem Cells

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Approximately 1 × 106 PDLSCs at the third passage were added in blocking buffer and incubated with anti-STRO-1 immunoglobulin (Ig)M (Santa Cruz, CA, USA) for 1 h at 37°C, then incubated with goat anti-mouse IgM FITC secondary antibodies (Molecular Probes, Eugene, Carlsbad, CA, USA) for an additional 1 h. PDLSCs incubated with the secondary antibody only was used as a negative control. Another 1 × 106 PDLSC was incubated with anti-CD146-PE, anti-CD45-FITC, and anti-CD90-APC antibodies (BD Biosciences, USA), at 37°C for 30 min. 1 × 106 BMSCs at the third passage were incubated with antibodies at 37°C for 30 min, including anti-CD29-FITC, anti-CD 45-FITC, anti-CD44-FITC, anti-CD11b/c-FITC, and anti-CD90-FITC (BioLegend, CA, USA). The cells were then analyzed by flow cytometry (Attune NxT, Invitrogen, USA) and Treestar FlowJo software.
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