The largest database of trusted experimental protocols

26 protocols using vimentin

1

Western Blot Analysis of Cell Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was loaded onto polyacrylamide gel and moved onto PVDF membranes, which were kept in blocking buffer for 1 hour, and then placed with primary antibodies overnight at 4 °C (ANGPT2, 1:200, Abcam, N-cadherin, Vimentin, E-cadherin and β-catenin 1:200, Boster Biological Technology and β-actin, 1:4,000, Santa Cruz). Membranes were then placed in incubation with secondary antibody (1:5,000, Santa Cruz). β-actin served as control. Protein was quantified through the use of ImageJ (NIH, USA). Final data was represented as an average of 3 independent experiments.
+ Open protocol
+ Expand
2

Characterization of hAECs and hGL Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
hAECs and hGL cells were characterized by using the immunofluorescent labeling technique. Cells were fixed with 4% paraformaldehyde (PFA), and then incubated with the following primary antibodies at 4 °C overnight: EpCam (1:200 dilution; Boster Biological Technology, Pleasanton, CA, USA), E-cadherin (1:200 dilution; Boster Biological Technology) and vimentin (1:200 dilution; Boster Biological Technology) were used for the identification of hAECs. FSHR (1:200 dilution; Boster Biological Technology) and N-cadherin (1:200 dilution; Boster Biological Technology) were used for the identification of hGL cells. After that, cells were incubated with secondary antibody conjugated with Alexa Fluor® 488 (1:200, Thermo Fisher Scientific). Cells were counterstained with DAPI (Thermo Fisher Scientific) and examined under the fluorescence microscope (Leica, Wetzlar, Germany).
+ Open protocol
+ Expand
3

Western Blot Analysis of Glioma Biomarkers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein was isolated from glioma cells using cell lysis buffer (Beyotime, Shanghai, China), separated by SDS–PAGE, and transferred to PVDF membranes. Membranes were incubated with primary antibodies for MTDH, E-cadherin (rabbit polyclonal, Santa Cruz, USA), Vimentin (mouse monoclonal, Boster, Wuhan, China), PTEN (mouse monoclonal, Proteintech Group Inc, Chicago, USA) and GAPDH (ZSGB-Bio, Beijing, China), followed by incubation with HRP conjugated secondary antibodies and ECL detection. GAPDH was used as loading control. All experiments were performed in triplicate.
+ Open protocol
+ Expand
4

Renal Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Renal tissues or cells were harvested and centrifuged at 12,000 g to remove cell debris. Protein concentration was measured using a BCA assay kit (Pierce). Eighty micrograms of protein was subjected to SDS-PAGE and transferred onto polyvinylidene difluoride membranes. After transfer, the membranes were blocked and blotted routinely with antibodies against VE-cadherin (BD Biosciences), α-SMA (Abcam), collagen1 (Abcam), PP2Ac (Cell Signaling Technology), occludin (Invitrogen), P-threonine/P-serine (Santa Cruz), nitrotyrosine (Cayman), acetylated-lysine (Cell Signaling Technology), phosphotyrosine (PY-20,Biolgend), PP2A,C subunit, demethylated (Millipore), vimentin (Boster) and CD31 (Proteintech). The immunolabeled proteins were detected by enhanced chemiluminescence (Pierce).The density of the bands was analyzed by Quantity One software (Bio-Rad).
+ Open protocol
+ Expand
5

Fluorescence in situ Hybridization and Immunofluorescence for miR-22-3p

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fluorescence in situ hybridization of miR‐22‐3p was performed using a 5′‐DIG‐and 3′‐DIG‐labelled miRCURY LNA Detection Probe (Genepharma) and 4‐μm tissue sections. The sequence of the miR‐22‐3p probe was as follows: 5′ Dig‐ACAGTTCTTCAACTGGCAGCTT‐Dig 3′. The detection of miR‐22‐3p FISH was performed using FISH Probe Kit (Genepharma) according to the manufacturer's protocol. The procedure of IF was performed as previously described (Jiang et al., 2015 (link)). Primary antibodies used for IF were vimentin (1:100; Boster), keratin (1:100; Boster), HIF‐1α (1:100; CST), NLRP3 (1:100; CST) at 4°C overnight; PBS was used as the negative control. The secondary antibodies were anti‐mouse IgG Alexa Fluor‐488 or anti‐rabbit IgG Alexa Fluor‐594 (1:1000, CST) at room temperature for 1 h. Glass coverslips were mounted using mounting media supplemented with DAPI stain (VectorLabs) and preparations imaged under a fluorescent microscope.
+ Open protocol
+ Expand
6

Immunofluorescence and Immunoblotting Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Experiments were performed according to protocols previously described [31 (link)]. Samples were incubated overnight at 40C with different dilutions for immunofluorescence with primary antibodies against ClC-3 (1:50, Abcam), β1 integrin (1:100, BD Pharmingen), α-tubulin (1:50, Abcam), vimentin (1:100, Boster), K18 (1:100, Boster) and K18 pS52 (1:50, Abcam). All antibodies were diluted to 1:1000 for immunoblotting.
+ Open protocol
+ Expand
7

Western Blot Analysis of Protein Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total tissues and cellular proteins were extracted and separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred onto polyvinylidene fluoride membranes (Millipore, USA). The membranes incubated overnight at 4 °C with primary antibodies. The antibodies against CDK2, Cyclin D1, β-catenin, C-myc, N-cadherin, Snail were purchased from Affinity (USA), p21 antibody was from Cell Signaling Technology (USA), E-cadherin antibody was from BD Biosciences (USA), antibodies against MMP9, Vimentin, β-actin and GAPDH were from Boster (China).
+ Open protocol
+ Expand
8

Immunofluorescent Identification of hAECs

Check if the same lab product or an alternative is used in the 5 most similar protocols
hAECs were identified by using the indirect immunofluorescent labeling technique to detect the expression of CK-7 and vimentin. Cells were fixed with 4% paraformaldehyde (PFA), and then incubated with the following primary antibodies at 4°C overnight: CK-7 (1:200 dilution; Boster, Wuhan, China) and vimentin (1:200 dilution; Boster). After that, cells were incubated with secondary antibody conjugated with Alexa Fluor® 488 (1:200; Thermo Fisher Scientific). Cells were counterstained with DAPI (Thermo Fisher Scientific) and examined under the fluorescence microscope (Leica, Germany).
+ Open protocol
+ Expand
9

Immunoblotting Analysis of Cytoskeletal Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was extracted and separated by SDS-polyacrylamide gel electrophoresis and was then transferred to polyvinylidene ethylene membranes, blocked from the nonspecific antibody binding sites with non-fat milk powder (concentration of 0.5%) at room temperature for 2 h, and then polyclonal antibodies against α-SMA (1 : 200, Boster, China), vimentin (1 : 200, Boster, China), TGF-β1 (1 : 200, BioVision, USA), TGF-β3 (1 : 100, Abcam, USA), and GAPDH (1 : 5000, Boster, China) were added. This was followed by incubation overnight at 4°C, followed by incubation with a secondary antibody (1 : 5000) for 2 h, and then autoradiograms were taken with ECL reagent in the chamber. Finally, imaging analysis was carried out by an automated electrophoresis gel imaging system.
+ Open protocol
+ Expand
10

Isolation and Culture of Cardiac Fibroblasts

Check if the same lab product or an alternative is used in the 5 most similar protocols
The apexes of the hearts were isolated from 1 ~ 3-day-old Sprague-Dawley rats which were obtained from the Experimental Animal Center of Bengbu Medical College (Bengbu, China). All the animal procedures were in accordance with the United States National Institutes of Health Guide and were approved by the Animal Use and Care Committee of Bengbu Medical College.
After washing in precooling D-Hank's solution, the heart tissues were sheared and fully digested (37°C, 5% CO2, incubated for 7 ~ 8 min). The digestive enzymes consisted of trypsin (0.07%, Beyotime Biotechnology, Shanghai, China), type II collagenase (0.08%, Sigma-Aldrich Co., St. Louis, MO, USA), and DNase I (10 μg/mL, Beijing Solarbio Science & Technology Co. Ltd., Beijing, China). When the tissue started to loosen, precooling DMEM medium (10% FBS) was added to stop the digestion. Cells isolated from the tissue were collected and cultured in DMEM medium (glucose 5.5 mM) containing 10% FBS in an incubator (37°C, 5% CO2) for 90 min. Vimentin (1 : 200, Boster Biological Technology, Wuhan, China)-positive cells were considered as CFs. As the cells grew to 80% confluence, they were passaged at a ratio of 1 : 2, and the 2nd to 4th passages of cells were used for the following experiments.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!