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24 protocols using eclipse 80

1

Immunohistochemical Analysis of Xenografted Tumors

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To analyze xenografted tumors, tumor tissues were fixed, dehydrated and embedded in paraffin. The paraffin embedded tissues were then sectioned at a thickness of 5 μm and blocked endogenous peroxidase activity with 1% hydrogen peroxide for 5 min. The tissue sections were incubated with antibodies against caspase-9 and caspase-9/Thr125 and developed with DAB (3,3′-diaminobenzidine) for 7 min. Nuclei were counterstained with Mayer’s hematoxylin, slides were mounted and imaged under a microscope (Nikon Eclipse 80).
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2

Immunohistochemical Localization of DsRed Protein

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Coronal sections were cut at 30 μm using a cryostat and washed in 0.1 M phosphate buffer (PB; pH 7.4). After incubation in blocking buffer containing 10% sheep serum, 0.1% Triton X-100 diluted in 0.1 M PB for 30 minutes at room temperature, sections were transferred to 1:1000 anti-DsRed (Clontech #632496) in blocking buffer and incubated overnight on a shaker at 4°C. Following primary antibody incubation, sections were washed 3×10 minutes in PB followed by incubation in 1:500 Cy3-conjugated anti-rabbit secondary antibody (Sigma #C2306) in blocking buffer for 2 hours on a shaker at room temperature. Sections were washed in PB, mounted onto slides and left to air dry before being coverslipped and viewed using epifluorescence (Nikon Eclipse 80; Kingston upon Thames, Surrey, United Kingdom). Photomicrographs were taken with a Micropublisher 3.3 RTV camera and QCapture Pro software (Qimaging Inc., Surrey, BC, Canada).
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3

Immunohistochemical Analysis of Tau and GSK3β

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Brain samples were fixed followed by embedding in paraffin wax. Brain sections (3um) containing the middle brain (MB), Hipp and SN were cut using a microtome (RM2235, Leica, Wetzlar, Germany). Antigen retrieval was performed by heating the sections at 120°C for 5 min and blocked using normal goat serum. Brain sections were incubated with anti- AT8 (#MN1020, Thermo Fisher Scientific, MA, USA) or phospho GSK3β (Y216) (#ab75745, Abcam plc, Cambridge, UK) overnight at 4°C followed by incubating with the second antibody. A 3, 3ʹ-diaminobenzidine (DAB) kit (CW2069S, CWBIO, Beijing, China) was used to protein visualization and couterstained with hematoxylin. Images were captured with a microscope equipped with a camera (Eclipse80, Nikon, Tokyo, Japan). The immune-reactive cells were counted using Image J version 1.46 (NIH. MA. USA).
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4

Lipid Accumulation Visualization by Oil Red O

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To observe lipid accumulation in tissues and cells by Oil Red O staining, cells were treated for 12 h with a mixture of 300 μM OA/PA (2:1, M/M) and then Ad-GFP or Ad-11β-HSD1 was added for another 36 h incubation. Cells were washed three times with 1 × PBS (5 min per wash), and fixed with 4% paraformaldehyde at room temperature for 15 min. Cells were dehydrated for 15 s with 60% isopropanol, then stained with prewarmed Oil Red O for 30 min at 37 °C before a final wash in 60% isopropanol. Haematoxylin was used to stain the nucleus. Coverslips were mounted with glycerol gelatin and observed under a microscope (Nikon Eclipse 80, imaging software NIS-Elements F Version 4.60.00). For tissue samples, frozen sections (7 μm) of liver specimens were placed on a glass slide for Oil Red Staining. After fixed in 4% paraformaldehyde at room temperature for 10 min, sections were briefly rinsed softly with 1 × PBS with then with 60% isopropanol, and then stained with Oil Red O for 20 min at room temperature. The next steps were as the same as those described above.
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5

Immunostaining of Drosophila Larval Tissues

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Salivary glands and guts isolated from L3 larvae and ovaries isolated from adults were immunostained as described (Phalle Bde, 2004 (link)). Polytene chromosome spreads were prepared using conventional squash and immunostaining protocols (Johansen et al., 2009 (link)). Antibodies used for immunostaining were: anti-GFP (1:200, Novus Biologicals, NB600), anti-dKeap1 (1:100) and anti-CncC (1:100) (Deng and Kerppola, 2013 (link)), anti-Lamin Dm0 (1/200, Developmental Studies Hybridoma Bank, ADL67.10), Alexa Fluor 594-conjugated goat anti-rabbit secondary antibody (1:1000, Invitrogen). The stained samples were mounted in mounting solution (80% glycerol, 10 mM Tris pH9.0 and 2% n-Propyl Gallate) and examined under a Nikon Eclipse 80 fluorescence microscope with SPOT Insight 4 MP color digital camera.
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6

Fetal Anatomy: A Morphological Study

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The study was performed in accordance with the provisions of the Declaration of Helsinki 1995 (as revised in Edinburgh 2000). We examined paraffin-embedded histological sections from 22 fetuses near term (gestational age approximately 30–38 weeks; crown-rump length [CRL] 250–315 mm). All fetuses were part of the large collection kept at the Department of Anatomy, Universidad Complutense, Madrid, and were the products of miscarriages and ectopic pregnancies at the Department of Obstetrics of the University. All sections were stained with hematoxylin and eosin (H&E). The sectional planes were frontal (3 fetuses), sagittal (12) and horizontal (7). The study was approved by Complutense University ethics committee (B08/374). Observations and photography were usually performed with a Nikon Eclipse 80.
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7

Sphere Formation Assay Protocol

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For sphere formation assays, single cell suspensions were washed twice using serum-free phosphate buffer solution (PBS) and plated in 6-well ultralow attachment plates (Corning, Steuben County, New York, USA) at a density of 200 cells in the conditional media at 37 °C in a humidified atmosphere of 95% air and 5% CO2 for 21 days. Spheres were fixed with 4% buffered formalin for 15 minutes and stained with 1% crystal violet for 30 minutes. The plates were gently washed with PBS and dried for microscopic sphere evaluation under a phase contrast fluorescence microscope (Nikon, ECLIPSE 80).
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8

Measuring Intracellular K+ in S. pyogenes

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The concentrations of K+ ions in the cell suspensions were measured using a K+ ion selective electrode, as previously described by Cox et al (30 (link)). The concentration of total free K+ in the S. pyogenes suspension was measured following incubation in lysostaphin (50 mg/ml) at 37°C for 30 min, followed by sonication with a Laboratory Continuous Cell Flow Probe Sonicator (SJIA-1500W; Ningbo Yinzhou Sjialab Equipment Co., Ltd., Ningbo, China). Complete lysis was confirmed by microscopic examination (Nikon Eclipse 80).
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9

Sperm Morphology and Vitality Analysis

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To assess the number, vitality, and morphology of the sperm, the left epididymis was quickly separated to prepare a sperm suspension. Then, 4 drops of the sperm suspensions were pipetted onto the glass slide and the proportion of motile sperm was observed under a microscope (Nikon eclipse 80; Tokyo, Japan). We observed 10 visual fields for each animal and the average number of dead sperm (500 sperm per field) and the number of dead sperm were also calculated.
The number of sperm was counted under a microscope. A 0.5 mL sperm suspension was taken and diluted with 9.5 mL of saline, and then a 10 µL sperm suspension was transferred into a hemocytometer and stood for 5 minutes.
A drop of the sperm suspension was taken and fixed with methanol for 5 minutes and stained with 1% eosin for 1 hour. Then, the sperm morphology was observed under the microscope after washing and the types of shape of sperm were counted. A total of 1,000 sperm per animal were counted and the deformity rate (%) was calculated. All studies were performed in triplicate.
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10

Fetal Anatomy Across Gestation

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The study was performed in accordance with the provisions of the Declaration of Helsinki 1995 (as revised in 2013). The study included 45 midterm fetuses of CRL 32–110 mm (GA 8–15 weeks) and 17 late-stage fetuses of CRL 250–328 mm (GA 30–38 weeks). All specimens were part of the large collection kept at the Embryology Institute of the Universidad Complutense, Madrid, and originated from miscarriages and ectopic pregnancies at the Department of Obstetrics of the University. The midterm specimens had been sectioned serially, 10 sagittally and 35 horizontally; most sections were stained with hematoxylin and eosin (H&E), with others stained with Masson trichrome, azan, orange G or silver stain. In contrast, after macroscopic observations during dissection, the abdomens of the late-stage fetuses were sectioned horizontally at 100–200-µm intervals and stained with H&E. During dissection of the late-stage fetuses, photographs were taken with a Pentax K-1 camera equipped with a 50–100 mm zoom lens. Histological samples were observed and most photographs taken with a Nikon Eclipse 80, whereas photographs at ultra-low magnification (objective lens less than ×1) were taken with a high-grade flat scanner and translucent illumination (Epson scanner GTX970, Java, Indonesia). The study protocol was approved by the Ethics Committee of the Universidad Complutense (B08/374).
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