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Easy nlc1200 nano

Manufactured by Thermo Fisher Scientific

The Easy nLC1200 nano is a liquid chromatography system designed for nanoscale separations. It features a compact design and is capable of delivering precise and reproducible flow rates for high-performance liquid chromatography (HPLC) applications.

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2 protocols using easy nlc1200 nano

1

LC–MS/MS Analysis of Peptides

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LC–MS/MS analysis was carried out using the Q Exactive Plus mass spectrometer (Thermo Fisher Scientific) coupled to the Easy nLC1200 nano-flow UPLC. Peptides (500 ng of each sample) were injected into the Acclaim PepMap 100 trap column (nanoViper C18, 100 μm × 2 cm, Thermo Scientific) and separated by the Acclaim Pep Map RSLC analytical column (nanoViper C18, 50 μm × 15 cm, Thermo Scientific) set at the flow rate of 300 nL/min. The solvent gradients were set as a linear gradient of 8~38% mobile phase B (80% acetonitrile contains 0.1% formic acid) over 102 min through 120 min run time. The sample was atomized using the nanoESI source. The data-dependent acquisition (Top 20) was carried out using MS survey scans in the 350~1700 m/z range with 70,000 mass resolution. For subsequent MS/MS analysis, the resolution was set to 17,500, and the isolation window was set to 1.6 m/z. The normalized collision energy was 27 eV. Peptides with charge 2~7 were selected.
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2

Nano-UHPLC-MS/MS Peptide Profiling

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Peptides were resuspended in water with 0.1 % formic acid (FA) and analyzed using EASY-nLC 1200 nano-UHPLC coupled to a Q Exactive HF-X Quadrupole-Orbitrap mass spectrometer (Thermo Scientific). The chromatography column consisted of a 50 cm long, 75 μm i.d. microcapillary capped by a 5 μm tip and packed with ReproSil-Pur 120 C18-AQ 2.4 μm beads (Dr. Maisch GmbH). LC solvents were 0.1 % FA in H2O (Buffer A) and 0.1 % FA in 90 % MeCN: 10 % H2O (Buffer B). Peptides were eluted into the MS at a flow rate of 300 nL/min. over a 240 min. linear gradient (5-35 % Buffer B) at 65 °C. Data was acquired in data-dependent mode (top-20, NCE 28, R = 7,500) after full MS scan (R = 60,000, m/z 400-1,300). Dynamic exclusion was set to 10 s, peptide match to prefer and isotope exclusion was enabled.
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