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3 protocols using mouse anti h3

1

Histone Modification and Damage Response

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Samples were loaded on 4–12% NuPAGE Bis-Tris Gel (Novex Life Technologies) and transferred to a polyvinylidene difluoride membrane (0.45 μm, Immobilon). Membranes were blocked with 5% BSA in PBS for 1 h at room temperature and incubated with primary antibodies diluted 1:1,000 in blocking buffer overnight at 4 °C. Primary antibodies were: H3K9me1 (Upstate, 07-450), H3K9me3 (Millipore, 07-442) mouse anti-H3 (Abcam, ab10799), γH2A.X (Millipore, 05-636), Chk1p (Cell Signaling, 2344), Chk1 (DCS-310 (ref. 98 (link)), p53-S15p (Cell Signaling, 12571), p53 (Sigma-Aldrich, mouse monoclonal antibody, clone DO-1) and β-actin (Sigma-Aldrich, A5316). Membranes were washed in 0.1% Tween-20 in PBS on the following day, followed by incubation with secondary antibody coupled to near-infrared dyes CF 680/CF 770 (1:10,000). Antibodies were visualized using an Odyssey CLx infrared scanner (LiCor).
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2

Western Blot Analysis of Histone Modifications

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Total cell lysates were resolved in 4-12% Bis-Tris Protein Gels (Invitrogen) with MOPS buffer (Invitrogen) and transferred in for 1.5h (80 V) onto PVDF membrane (Millipore) in Tris-Glycine transfer buffer containing 20% MeOH and 0.05% SDS. Blots were blocked for 1 h in blocking buffer (5% milk in 0.1% Tween 20 PBS) and incubated with primary antibodies: mouse anti-H4 (1:1000, Abcam #174628), rabbit anti-H4R3me2a (1:1000, Active Motif #39705), mouse anti-FLAG (1:5000, Sigma #F1804), mouse anti-β actin (1:3000, Abcam #3280), mouse anti-H3 (1:1000, Abcam #174628), rabbit anti-H3R2me2a (1:1000, Millipore #04-808), rabbit anti-Rme2a (1:1000, Cell Signaling Technology #13522), rabbit anti-Rme2a Asym24 (1:1000, Millipore#07-414), rabbit anti-Rme2S (1:1000, Cell Signaling Technology #13222), rabbit anti-Rme1 (1:1000, Cell Signaling Technology #8015) in blocking buffer overnight at 4 °C. After five washes with 0.1% Tween 20 PBS the blots were incubated with goat-anti rabbit (IR800 conjugated, LiCor #926-32211) and donkey anti-mouse (IR 680, LiCor #926-68072) antibodies (1:5000) in Odyssey Blocking Buffer (LiCor) for 1 h at RT and washed five times with 0.1% Tween 20 PBS. The signal was read on an Odyssey scanner (LiCor) at 800 nm and 700 nm.
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3

Parasite Protein Western Blot Assay

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Full parasite protein western blot samples were collected by lysing RBCs with 0.1% saponin and boiling protein in Loading Buffer (50mM Tris-Cl pH 8.0, 20% SDS, 1% Bromophenol Blue). Fractionated parasite protein was prepared as described in [95 (link)]. Blots were performed as described [19 (link)]. Primary antibodies used were: 1/1000 rat ant-HA (Roche 3F10), 1/1000 mouse anti-GFP (Roche), 1/3000 rabbit anti-aldolase conjugated to HRP (Abcam ab38905), or 1/3000 mouse anti-H3 (Abcam ab10799). Secondary antibody concentrations used were 1/3000 goat anti-rat HRP conjugate (Millipore), 1/3000 goat anti-mouse HRP conjugate, or 1/10,000 (Pierce) goat anti-rabbit HRP conjugate (Millipore). ECL reagent (Pierce) was used to detect HRP signal. Blots were exposed to autoradiography film (VWR) and visualized using an autoradiography developer.
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