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2 protocols using west femto substrate trial kit

1

Protein Expression and Activation Analysis

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The cells were lysed in RIPA lysis buffer (Millipore) containing protease (Bimake) and phosphatase (Bimake) inhibitors. The samples were resolved by SDS-PAGE and transferred to PVDF membrane after blocking, the membranes were incubated with primary antibodies overnight at 4 °C and then exposed to secondary antibodies. Protein bands were visualized using West Femto Substrate Trial Kit (Thermo Scientific). The primary antibodies included anti-p38 MAPK (Cell Signaling Technology), anti-phospho-p38 MAPK (Thr180/Tyr182) (Cell Signaling Technology), anti-STAT3 (Abcam), anti-phospho-STAT3 (Tyr705) (Abcam), anti-LC3B (Sigma), anti-Beclin1 (proteintech), anti-β-Tubulin (Cell Signaling Technology), and anti-GAPDH (proteintech). The secondary antibodies were goat anti-mouse IgG HRP (proteintech) and goat anti-rabbit IgG HRP (proteintech).
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2

Proteomic Analysis of Bortezomib-Treated 4T1 Cells

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UPs were enriched from 4T1 tumor cell lysate treated with bortezomib and ammonium chloride by α-Al2O3-CONH-Vx3, and the whole cell lysate, unbound lysate (the supernatant after the centrifugation for α-Al2O3-UPs collection from the whole cell lysate) and α-Al2O3-UPs were collected for Western blot analysis. All the samples were mixed with SDS-PAGE loading buffer (Invitrogen) and boiled for 5 mins. Then, the samples were centrifuged at 12000 g for 10 mins and the supernatant was resolved by 12.5% SDS-PAGE (Invitrogen). Then, the proteins were transferred to a PVDF membrane, blocked by 5% dry milk for 1 hr, incubated with primary antibody overnight at 4°C, and exposed to HRP-conjugated secondary antibody for 1 hr. The membrane was revealed using West Femto Substrate Trial Kit (Thermo Fisher). The primary antibody was anti-ubiquitin antibody (1:1000, Sigma, #3933) and the secondary antibody was goat anti-rabbit IgG HRP (1:5000, eBioscience).
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