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Clone xmg1

Manufactured by Thermo Fisher Scientific

The Clone XMG1.2 is a laboratory instrument designed for cell culture applications. It is capable of monitoring and controlling cell growth parameters, such as temperature, pH, and dissolved oxygen levels, within a controlled environment. The core function of the Clone XMG1.2 is to provide a stable and optimized cell culture system to support the growth and maintenance of various cell lines.

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11 protocols using clone xmg1

1

Polarization of Murine Splenic Naive Th Cells

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Splenic naive Th cells were purified with the CD4+CD62L+ T Cell Isolation Kit II (Miltenyi Biotec) and polarized in vitro toward differentiated Th subtypes as described before in (Hebenstreit et al., 2011 (link)). In brief, naive cells were seeded into anti-CD3e (1 μg/ml, clone 145-2C11, eBioscience) and anti-CD28 (5 μg/ml, clone 37.51, eBioscience) -coated plates. The medium contained the following cytokines and/or antibodies for the different Th subtypes: Th1, recombinant murine IL-12 (10 ng/ml, R&D Systems) and neutralizing anti-IL-4 (5 μg/ml, clone 11B11, eBioscience); Th2, recombinant murine IL-4 (10 ng/ml, R&D Systems) and neutralizing anti-IFN-γ (5 μg/ml, clone XMG1.2, eBioscience); Th0, neutralizing anti-IL-4 (5 μg/ml, clone 11B11, eBioscience), neutralizing anti-IFN-γ (5 μg/ml, clone XMG1.2, eBioscience). The cells were removed from the activation plate on day 4. Th1 and Th2 cells were cultured for another four days in the absence of CD3 and CD28 stimulation. When required, cells were restimulated with phorbol dibutyrate and ionomycin (500 ng/ml, Sigma-Aldrich) for 4 hr in the presence of Monensin (2 μM, eBioscience) for the last 2 hr.
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2

LCMV-GP33 Tetramer Staining Protocol

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The Tetramer Facility of National Institutes of Health (NIH) provided LCMV-GP33 tetramer. Cells were stained with allophycocyanin (APC)-labeled GP33 MHC class I tetramer (GP33/H-2Db) for 15 minutes at 37 °C. After incubation, the samples were stained with anti-CD8 (clone 53–6.7; eBioscience) or anti-CD4 (clone GK1.5; eBioscience) antibodies for 30 minutes at 4 °C. Absolute numbers of GP33-specific CD8+ T cells were calculated with fluorescent beads (BD Biosciences) by using fluorescence-activated cell sorting (FACS). For measurement of intracellular IFN-γ, cells were fixed with 2% formaldehyde in PBS for 10 minutes, permeabilized with 1% saponin in FACS buffer at room temperature, and stained with anti–IFN-γ antibody for 30 minutes at 4 °C (clone XMG1.2; eBioscience). All stained cells were analysed with a FACSFortessa (BD Biosciences) flow cytometer, and data were analysed with FlowJo software.
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3

Polarization of Naive CD8+ T Cells

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Splenic naïve CD8+ T cells were purified by using Naive CD8a+ T Cell Isolation Kit, mouse (Miltenyi Biotec) following the manufacturers protocol, and polarized in vitro toward differentiated Tc1 and Tc2. In brief, naive cells were seeded into anti-CD3e (2 μg/ml, clone 145-2C11, eBioscience) and anti-CD28 (5 μg/ml, clone 37.51, eBioscience) coated plates. The medium contained the following cytokines and/or antibodies:
Tc1 subtype: recombinant murine IL2 (10 ng/ml, R&D Systems), recombinant murine IL12 (10 ng/ml, R&D Systems) and neutralizing anti-IL4 (10 μg/ml, clone 11B11, eBioscience). Tc2 subtype: recombinant murine IL2 (10 ng/ml, R&D Systems), recombinant murine IL-4 (10 ng/ml, R&D Systems) and neutralizing anti-IFNg (10 μg/ml, clone XMG1.2, eBioscience).
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4

Differentiation of Naive CD4+ T Cells

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Naïve CD4+ T cells were isolated from the spleens of WT mice or AhR-/- mice using the Naive CD4+ T-cell isolation kit (Miltenyi Biotech, Bergisch Gladbach, Germany). For Treg cell polarization, naive CD4+ T cells were stimulated with immobilized anti-CD3 mAb (2 μg/mL, clone145-2G1, eBioscience) and soluble anti-CD28 mAb (1 μg/mL, clone37.51, eBioscience) supplemented with human TGF-β1 (2.5 ng/mL, R&D Systems) and mouse IL2 (10 ng/mL, R&D Systems) with the indicated concentration of mesalamine for 3 days. For Th1 or Th17 cell polarization, naive CD4+ T cells were stimulated with immobilized anti-CD3 mAb and soluble anti-CD28 mAb for Th0; with recombinant mouse IL12 (10 ng/mL, R&D Systems) plus anti-IL4 mAb (10 μg/mL, clone11B11, eBioscience) for Th1; and with human TGF-β1, mouse IL6 (30 ng/mL, R&D Systems), anti-IL4 mAb, and anti-IFN-γ mAb (10 μg/mL, cloneXMG1.2, eBioscience) for Th17, with the indicated concentration of mesalamine, for 3 days.
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5

Assessing GM-CSF and IL-23 Production

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Splenocytes of C57BL/6 (1.5 × 105 per well) were incubated with ONX 0914 and stimulated with plate bound anti-CD3 (5 μg/ml, clone 17A2; eBioscience, San Diego, CA, USA) and anti-CD28 (5 μg/ml, clone 37.51; BD Biosciences, Heidelberg, Germany) antibodies for 24 h. GM-CSF in the supernatant was determined by ELISA, according to the manufacturer's protocol (eBioscience). For GM-CSF polarizing conditions, anti-IL-12 (10 μg/ml, clone C15.6; BD Biosciences) and anti-IFN-γ (10 μg/ml, clone XMG1.2; eBioscience) antibodies were added and supernatants were analyzed 96 h post stimulation.
Human PBMC′s from healthy volunteers were incubated with ONX 0914 for 2 h at 37°C. Washed cells (2.5 × 105 per well) were stimulated with plate bound anti-CD3 (1 μg/ml, clone OKT3; eBioscience) and anti-CD28 (5 μg/ml, clone CD28.2; BD Biosciences) antibodies for 24 h. GM-CSF or IL-23 in the supernatant was determined by ELISA, according to the manufacturer's protocol (eBioscience).
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6

In Vitro Th2 Cell Differentiation

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Splenic naive T helper cells were purified with the CD4+CD62L+T Cell Isolation Kit II (Miltenyi Biotec) and polarized in vitro toward differentiated Th2 subtype as described before in [32 (link)]. In brief, naive cells were seeded into anti-CD3e (2 μg/ml, clone 145-2C11, eBioscience) and anti-CD28 (5 μg/ml, clone 37.51, eBioscience) antibody coated 96-well round bottom plates. The medium contained the following cytokines and/or antibodies for Th2 subtype: recombinant murine IL-2 (10 ng/ml, R&D Systems), recombinant murine IL-4 (10 ng/ml, R&D Systems), and neutralizing anti-IFN-g (5 μg/ml, cloneXMG1.2eBioscience). The cells were removed from the activation plate on day 4 (72 h). Th2 cells were cultured for another 2 days in the absence of anti-CD3 and CD28 stimulation. Then, cells were restimulated by anti-CD3e/CD28-coated plate for 6 h. For flow cytometric detection, cells were treated with monensin (2 μM, eBioscience) for the last 3 h.
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7

Intracellular Cytokine Staining for T Cell Characterization

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Intracellular cytokine staining was performed on single cell suspensions of splenocytes or hepatocytes following a four-hour incubation with brefeldin A (20 μg/ml, Sigma) and the MHV peptides M133 (MHC class II; 4 μg/ml, Biosynthesis) and S598 (MHC class I; 9.3 μg/ml, Biosynthesis). Isolated cells were stained with the following antibodies: CD3 (eBioscience, clone 17A2), CD4 (eBioscience, clone GK1.5), CD8 (eBioscience, clone 53-6.7), CD44 (eBioscience, clonse IM7), and CD11a (Biolegend, clone M17/4). Staining for interferon gamma (eBioscience, clone XMG1.2) was performed after permeabilization with Cytofix/cytoperm Plus Fixation/Permeabilization kit (BD). An LSR II (Becton Dickinson) flow cytometer was used to analyze stained cells. The resulting data were analyzed using FlowJo software (Treestar).
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8

Multiparametric Flow Cytometry of Immune Cells

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Surface marker expression was analyzed using the following antibodies: CD3 (clone 17A2) and B220 (clone RA3-6B2) (all from eBiocience according to data sheet). Staining was performed in the presence of Fc-receptor blocking antibody (clone 2.4G8, a kind gift of E. Kremmer, Helmholtz Zentrum München). Intracellular cytokine staining for IFN-ɣ (eBioscience Clone XMG1.2) was performed as follows: 1x106 cells/ well were put in 200μL of stimulation media (RPMI 1640 + 10% FCS supplemented with PMA (20ng/mL), Ionomycin (1μg/mL) and Brefeldin A (10μg/mL)) in a 96 well flat bottom plate and incubated for 4h at 37°C. Unstimulated cells were handled in parallel, without PMA/Iono stimulation but with Brefeldin A. After incubation, cells were washed twice with PBS and used for surface marker staining (B220) followed by intracellular CD3 and IFN-ɣ staining with Fix/Perm-Kit (eBioscience) as described by the manufacturer.
All cells were processed on a LSRII Fortessa Flow Cytometer (BD) and analyzed with FlowJo9.6.2 software. Dead cells were excluded using Live/Dead Fixable Blue Dead Cell Stain Kit (Invitrogen) and doublets by gating on single cells.
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9

Th17 Cell Differentiation Assay

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CD4+ T cells from WT, lmp7−/− or lmp2−/− mice were isolated from spleen and lymph nodes by negative magnetic cell sorting (MACS, Miltenyi Biotec). CD4+ T cells were cultured containing plate-bound 5 μg/ml anti-CD3 (clone 145-2C11) and 1 μg/ml soluble anti-CD28 (clone 37.51). For Th17 differentiation, cultures were supplemented with 5 μg/ml α-IFN-γ (clone XMG1.2), α-IL-4 (10% culture supernatants of clone 11B11), 50 U/ml rhIL-2 (Novartis), 1ng/ml rhTGF-β1 (PeproTech) and 40 ng/ml IL-6 (PeproTech). 200-400 nM ONX-0914 (Onyx Pharmaceuticals) or 300-400 nM BAY 11-7082 (Sigma-Aldrich) were added to the Th17 differentiation medium for indicated time points. Cells were restimulated with 750 ng/ml of ionomycin, 50 ng/ml of PMA in presence of 10 µg/ml Brefeldin A (all three substances, Sigma-Aldrich) and were analysed for IL-17A (clone eBio17B7, eBioscience) and IFN-γ (clone XMG1-2, eBioscience) production by intracellular staining (ICS). In some experiments, expression of transcription factor IRF4 (clone 3E4, eBioscience) was analysed by ICS.
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10

Cytokine Secretion Inhibition Assay

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PEC and MLN cells were incubated in the presence of Brefeldin A (Sigma) for 4 h at 37°C and 5% CO2 to block cytokine secretion. Cells were then incubated with Fcγ block (1 μg/ml) on ice before surface staining with fluorochrome-conjugated antibodies against CD3 (BD, clone 500A2), γδTCR (Biolegend, clone GL3), IL-1R (Biolegend, clone JAMA147), Vγ1.1 (Biolegend, clone 2.11), Vγ2 (BD, clone UC3-10A6) and Vγ3 (BD, clone 536). Garman nomenclature is used throughout this study (31 (link)). Cells were fixed and permeabilised using the Dako cytomation Intrastain Kit, before intracellular staining with a fluorochrome-conjugated antibodies against IL-17A (eBioscience, clone 17B7) and IFNγ (eBioscience, clone XMG1.2). Flow cytometric data was acquired with a BD FACSCanto II and analysed using FlowJo software (Tree Star, Inc). Gates are set on respective Flouresence Minus One (FMOs).
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