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3 protocols using histone h4 sc 25260

1

Evaluation of Histone Deacetylase Inhibitors

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Entinostat (DC6909) was bought from DC chemicals (Shanghai, China). Vorinostat (S1047) and Mocetinostat (S1122) were from Selleck chemicals (Houston, TX, USA). The siRNAs and primers were purchased from Integrated DNA Technologies (Coralville, IA, USA) and the sequence information is shown in Supporting Information Tables S1 and S2. Primary antibodies against BRCA1 (sc-642), heme oxygenase 1 (HO-1) (sc-136960), GAPDH (sc-365062), PARP1 (sc-7150), acetyl-histone H4 (sc-8662) and histone H4 (sc-25260) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Primary antibodies against phospho-histone H2A.X (γ-H2AX) (Ser139) (#9718S), TXNIP (#14715S) and cleaved caspase-3 (#9661S) were purchased from Cell Signaling Technology (Danvers, MA, USA). Primary antibody against MLXIP was from Proteintech (Rosemont, IL, USA). Secondary antibodies conjugated with horseradish peroxidase (HRP) were all purchased from Santa Cruz Biotechnology. The dilution factors of different antibodies can be found in Supporting Information Table S3.
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2

EAAT2 Expression Regulation Assay

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Cell culture media and reagents were purchased from Gibco (Carlsbad, CA). Manganese (II) chloride (MnCl2), protease inhibitor cocktail, poly-L-lysine, and dimethyl sulfoxide (DMSO) were purchased from MilliporeSigma (St. Louis, MO). Antibodies for EAAT2 (ab41621), phosphoserine (ab9332) and goat anti-rabbit IgG (ab97051) were obtained from Abcam (Cambridge, MA). Antibodies for YY1 (sc-7341), HDAC1 (sc-81598), HDAC3 (sc-376957), β-actin (sc-47778), and histone H4 (sc-25260) were obtained from Santa Cruz Biotechnology (Santa Cruz, CA). ChIP-validated EAAT2 primers and biotinylated oligonucleotides were obtained from Invitrogen (Carlsbad, CA). The AurkB inhibitor Hesperadin (Hesp) and the CK2 inhibitor CX-4945 (CX) were purchased from Cayman Chemical (Ann Arbor, MI). All chemicals were prepared in phosphate-buffered saline (PBS), double-distilled H2O or DMSO and diluted to working concentrations in Opti-MEM prior to use.
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3

Investigating Antioxidant Modulation of NF-κB Signaling

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Cell culture media and reagents were purchased from Gibco (Carlsbad, CA). Manganese (II) chloride (MnCl2), N-Acetyl-L-cysteine (NAC), α-tocopherol (AT), protease inhibitor cocktail, and dimethyl sulfoxide (DMSO) were purchased from MilliporeSigma (St. Louis, MO). The TNF-α inhibitor (E)-4-2-4-chloro-3-nitrophenyl (C-87) and the IKK-β inhibitor IKK16 were purchased from Tocris (Littleton, CO). The chloromethyl derivative of 2′,7′-dichlorodihydrofluorescein diacetate (CM-H2DCFDA) was purchased from Life Technologies, Inc. (Carlsbad, CA). Antibodies for EAAT2 (ab41621), IKK-β (ab32135) and phospho-IKK-β (ab59195) were obtained from Abcam (Cambridge, MA); antibodies for NF-κB p65 (sc-8008), YY1 (sc-7341), β-actin (sc-47778), and histone H4 (sc-25260) were obtained from Santa Cruz Biotechnology (Santa Cruz, CA). Bright-Glo luciferase reporter assay kits were purchased from Promega (Madison, WI), and an RNA isolation kit was obtained from Qiagen (Valencia, CA). The TNF-α standard tetramethylbenzidine (TMB) enzyme-linked immunosorbent assay (ELISA) development kit for human samples (900-T25) was purchased from PeproTech (Rocky Hill, NJ). All chemicals were prepared in phosphate-buffered saline (PBS), double-distilled H2O or DMSO, according to the manufacturer’s instructions, and diluted to working concentration in Opti-MEM prior to use.
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