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3 protocols using sirna duplexes targeting

1

siRNA Transfections for Gene Silencing

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Small-interference RNA (siRNA) transfections were performed using Lipofectamine RNAi MAX Reagent following manufacturer instructions (Invitrogen). siRNA duplexes targeting human IL8 (sc-39631), CXCL2 (sc-43934), MMP1 (sc-41552), VEGFA (sc-29520) PTGS2/COX-2 (sc-29279) and scrambled siRNA-A (sc-37007) were purchased from Santa Cruz Biotechnology, and incubated at 20 to 50 nM siRNA range for 24 h prior to treatments. Knockdown efficiency was confirmed by ELISA.
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2

NSCLC Cell Lines Genetic Manipulation

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All NSCLC cell lines, were obtained from the U.S. National Cancer Institute (NCI; MTA no. 2702–09). Cells were incubated at 37°C and maintained at 5% CO2. H23, H226, IMR-90 cell was grown in DMEM/HIGH GLUCOSE medium (SH30243.01, Hyclone, Logan, UT, USA) containing 10% FBS. Lung primary cell was airway epithelial cell basal medium (PCS-300-030, ATCC, Manassas, VA, USA) with the bronchial epithelial cell growth kit (PCS-300-040, ATCC, Masassas, VA, USA). NSCLC cells were grown in RPMI 1640 medium (SH30027.01, HyClone, Logan, UT, USA) containing 10% fetal bovine serum (FBS) (SH30070.03HI, HyClone, Logan, UT, USA), penicillin, and streptomycin. siRNA duplexes targeting human ALDH1L1 (sc-78373), DHFR (sc-37078), GOT2 (sc-60052), and MDH2 (sc-89622) (Santa Cruz Biotechnology, Santa Cruz, CA, USA) were introduced into cells using Lipofectamine® 3000 (L3000015, Invitrogen, Carlsbad, CA, USA) according to the manufacturer's instructions. As negative controls, cells were incubated with Lipofectamine® 3000 alone and a negative siRNA (sc-37007, sc-44230) (Santa Cruz). For ALDH overexpression, p3x FLAG-CMV-ALDH isoform constructs individually expressing ALDH1L1 and DHFR were produced by Cosmogenetech (Seoul, KOREA). Each cDNA sequence of ALDH1L1 and DHFR was obtained from NCBI. The plasmids were transfected into cells using Lipofectamine® 3000 according to the manufacturer's instructions.
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3

Silencing AMPK and Akt in UVB-Apigenin Study

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siRNA duplexes targeting mouse AMPKα1/2, Akt1/2, Akt3 and non-targeting control siRNA were purchased from Santa Cruz Biotechnology. The transfection of siRNA into 308 cells was performed by using Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer's instructions. Forty eight h (for AMPK) or 72 h (for Akt) after transfection, cell density was adjusted so cell confluence would be 90%, then the transfected cells were treated with apigenin and UVB.
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