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73 protocols using quetol 812

1

Ultrastructural Analysis of Glioblastoma Cells

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GSCs from the human glioblastomas were fixed in 1% glutaraldehyde and 0.1 M phosphate buffer for 15 min at 4°C. The cells were washed in phosphate buffer twice for 15 min each. Postfixation was performed in 1% osmium tetroxide for 1 h at 4°C, followed by another two 15-min washes in the same buffer. After dehydration, the material was embedded in Quetol 812 (Nisshin EM) diluted in propylene oxide (1:1) and incubated at room temperature for 24 h. The pellet was then transferred to pure Quetol 812 resin and incubated at 60°C for 72 h, until completely polymerized.
Semithin and ultrathin sections were obtained with the aid of an ultramicrotome. The semithin sections were stained with 1% toluidine blue. The ultrathin sections (100 nm) were placed on copper grids and stained with uranyl acetate and lead citrate. The grids were examined and photographed under a Hitachi H7000 electron microscope.
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Transmission Electron Microscopy Sample Preparation

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On the 29th and 70th DIVs, the samples were fixed with 2% PFA and 2% glutaraldehyde in 0.1 M cacodylate buffer pH 7.4 at 4°C. Thereafter, they were fixed with 2% glutaraldehyde at 4°C overnight. Next, the samples were rinsed 3 times with 0.1 M cacodylate buffer for 30 min each and were then fixed with 2% osmium tetroxide at 4°C for 1 h. The samples were dehydrated in graded ethanol solutions (50%, 70%, 90%, anhydrous). The samples were transferred to a resin (Quetol-812; Nisshin EM Co., Tokyo, Japan) and polymerized at 60°C for 48 h. The polymerized resins were ultra-thin sectioned at 70 nm with a diamond knife using an ultramicrotome (Ultracut UCT; Leica, Vienna, Austria), and the sections were mounted on copper grids. They were stained with 2% uranyl acetate at room temperature for 15 min, and washed with distilled water, followed by secondary staining with a lead stain solution (Sigma-Aldrich) at room temperature for 3 min. The grids were observed using a TEM (JEM-1400Plus; JEOL Ltd., Tokyo, Japan) at an acceleration voltage of 100 kV.
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Transmission Electron Microscopy of Chloroplasts

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Transmission electron microscopy was performed according to the methods described by Morita et al. (2009) with slight modifications. The middle section (~1 cm) of mature leaves were excited and firstly fixed with 2.5% glutaraldehyde in 100 mM cacodylate buffer (pH 7.4).
The Samples were post-fixed with 1.5% OsO4 in 100 mM cacodylate buffer (pH 7.4) for 90 min. Leaf samples were then embedded in Quetol resin mixture (Quetol 812, Nisshin EM) and sectioned using an ultramicrotome. The sections were mounted on copper grids and stained with 3% uranyl acetate and lead citrate. Micrographs of chloroplast were observed using a transmission electron microscope (Hitachi, H-7650).
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Electron Microscopy of Pancreatic Tissue

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For electron microscopy, 8–12-wk-old control, AcKO, or PcKO mice were used. CCK (0.25 µg/kg weight) or glucose (1 g/kg weight) was administered by i.p. injection. 30 min after the injections, the mice were perfused intracardially with 2.5% glutaraldehyde and 2% PFA in 0.1 M cacodylate buffer, pH 7.4. The pancreas was removed from each mouse and fixed in the same fixative and 0.1% OsO4, after which it was further fixed in 0.5% uranyl acetate in H2O, dehydrated, and embedded in Quetol 812 (Nisshin EM). Ultrathin sections were cut using an ultra-microtome (Reichert Jung). Electron micrographs were taken using a JEM-1010 (JEOL).
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5

Ultrastructural Analysis of Bacterial Infection in Ca9-22 Cells

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SEM and TEM were performed to observe Ca9-22 cells infected with bacteria at an MOI of 100 for 90 min. For TEM, infected and control Ca9-22 cells were washed with PBS, then fixed in 2% paraformaldehyde and 2% glutaraldehyde in 0.1 M cacodylate buffer (pH 7.4) at 4°C, then dehydrated in graded ethanol and embedded in resin (Quetol-812; Nisshin EM Co., Tokyo, Japan). Ultrathin sections were stained with 2% uranyl acetate and observed using TEM (JEM-1400Puls; JEOL Ltd., Tokyo, Japan) at an accelerating voltage of 80 kV. Digital micrographs were acquired directly using a CCD camera system (EM-14830RUBY2; JEOL Ltd., Tokyo, Japan). For SEM, infected and control Ca9-22 cells were washed with PBS, then fixed in 2% glutaraldehyde in 0.1 M cacodylate buffer (pH 7.4) at 4°C overnight. Additionally, specimens were fixed in 1% tannic acid in 0.1 M cacodylate buffer (pH 7.4) and stained for 1 h in 2% osmium tetroxide. Following dehydration in a graded series of alcohols and drying, specimens were coated with a thin layer using an osmium plasma coater (NL-OPC80NS; Nippon Laser & Electronics Laboratory, Nagoya, Japan). Examinations were performed using SEM (JSM-6340F; JEOL Ltd., Tokyo, Japan) at an accelerating voltage of 5.0 kV.
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Ultrastructural Analysis of PC12 and KT-5 Cells

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Fixation of PC12 and KT-5 cells was performed using 2% paraformaldehyde (PFA) and 2% glutaraldehyde (GA) in 0.1 M phosphate buffer (PB), pH 7.4 at 4 °C for 30 min followed by treatment with 2% GA in 0.1 M PB at 4 °C overnight. The next day, the cells were postfixed with 2% osmium tetroxide in 0.1 M PB for 1 h at 4 °C. After dehydration with graded alcohol, the cells were transferred to a resin (Quetol-812; Nisshin EM Co., Tokyo, Japan) and polymerized for 48 h at 60 °C. Ultra-thin sections of the polymerized resins (70 nm in thickness) were prepared using an ultramicrotome (Ultracut UCT; Leica, Vienna, Austria) and a diamond knife. The sections on copper grids were stained with 2% uranyl acetate for 15 min at room temperature followed by staining with lead stain solution (Sigma) for 3 min at room temperature. A transmission electron microscope (JEM-1400Plus, JEOL Ltd., Tokyo, Japan) was set at an acceleration voltage of 100 kV. Digital images with 3296 × 2472 pixels were taken from a CCD camera (EM-14830RUBY2, JEOL Ltd., Tokyo, Japan).
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Ultrastructural Analysis of Gastric Tissue

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Electron microscopy was performed by Tokai Electron Microscopy, Inc. (Nagoya, Japan). Tissue samples of approximately 2 mm3 were resected from the vicinity of the glandular stomach–jejunal anastomosis, a site of frequent localization of PACM, from rats 25 weeks postoperatively, while tissues of the glandular stomach mucosa and pancreas were resected from the control rats at 25 weeks of age. The cells were permeabilized and fixed in 2% paraformaldehyde and 2% glutaraldehyde. After washing, cells were fixed with 2% osmium tetroxide followed by dehydration with alcohol. Infiltration with propylene oxide and resin embedding (Quetol-812; Nisshin EM Co., Tokyo, Japan) were performed. The slices were further cut into 1.5 μm sections with a glass knife and stained with 0.5% toluidine blue. Ultra-thin slicing was performed at a thickness of 70 nm using a diamond knife. The primary staining was performed with 2% uranyl acetate and the secondary staining was performed with a lead stain solution (Sigma-Aldrich Co., Tokyo, Japan). Stained sections were observed using a transmission electron microscope (JEM-1400Plus; JOEL Ltd., Tokyo, Japan), and digital images were acquired using a CCD camera (3296 × 2472 pixels, EM-14830RUBY2; JEOL Ltd., Tokyo, Japan).
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8

Electron Microscopy Sample Preparation Protocol

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Electron microscopy was performed by Tokai Electron Microscopy Inc. The samples were fixed with 2% paraformaldehyde, 2% glutaraldehyde in 0.1 M phosphate buffer (pH 7.4), followed by postfixation with 2% osmium tetroxide. The fixed samples were dehydrated through a series of ethanol concentrations (50, 70, 90, and 100%) and then transferred to a resin (Quetol-812; Nisshin EM Co., Tokyo, Japan) and polymerized at 60°C.
The blocks were ultrathin sectioned at 70 nm using an ultramicrotome (Ultracut UCT; Leica) and stained with 2% uranyl acetate followed by lead stain solution (Sigma-Aldrich). The samples were observed by a transmission electron microscope (JEM-1400Plus; JEOL Ltd.) at an acceleration voltage of 80 kV. Digital images (2048 × 2048 pixels) were captured with a charge-coupled device camera (VRLRTA; Olympus Soft Imaging Solution GmbH).
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9

Tissue Preparation for Transmission Electron Microscopy

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The samples were prefixed with 2% PFA and 2% glutaraldehyde overnight. After being washed, they were postfixed with 2% osmium tetroxide. Samples were dehydrated through a graded series of ethanol and embedded in Quetol-812 (Nisshin EM Co., Tokyo, Japan). The polymerized resins were ultrathin sectioned (70 nm thickness), stained with 2% uranyl acetate, and then secondary stained with Lead stain solution (Sigma-Aldrich Co., Tokyo, Japan). The grids were observed by transmission electron microscopy (JEM-1400 Plus; JEOL Ltd., Tokyo, Japan).
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10

Ultrastructural Analysis of Fertilized Chorions

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The fertilized chorions were fixed in 2% paraformaldehyde and 2% glutaraldehyde in 0.1 M sodium cacodylate buffer (pH 7.4) overnight at 4 °C and then post-fixed with 2% osmium tetroxide in 0.1 M cacodylate buffer at 4 °C for 3 h. After dehydration using a graded ethanol series, the samples were placed in propylene oxide and embedded in 100% resin (Quetol-812; Nisshin EM Co., Tokyo, Japan). Ultrathin sections (70 nm) cut with a diamond knife using an ultramicrotome (Ultracut UCT; Leica, Vienna, Austria) were stained using uranyl acetate and lead stain solution (Sigma-Aldrich Co., Tokyo, Japan) and examined using transmission electron microscopy (JEM-1400Plus; JEOL Ltd., Tokyo, Japan). The digital images (3296 × 2472 pixels) were captured using a CCD camera (EM-14830RUBY2; JEOL Ltd., Tokyo, Japan). All the procedures after the fixation were consigned to the Tokai Electron Microscopic Analysis, Co., Ltd., Nagoya, Japan.
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