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Annexin 5 cy5

Manufactured by Abcam
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Annexin V-Cy5 is a fluorescently labeled protein used for the detection and quantification of phosphatidylserine (PS) exposure on the cell surface, a hallmark of apoptosis. It binds to PS with high affinity in a calcium-dependent manner. The Cy5 fluorophore allows for detection and analysis of apoptotic cells by flow cytometry, fluorescence microscopy, or other fluorescence-based methods.

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20 protocols using annexin 5 cy5

1

Apoptosis Induction Analysis

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Cells were seeded at ~30 to 40% confluence in 6 cm plates. After overnight incubation, media was aspirated and replaced with media with or without various concentrations of indicated drugs. After 72 hrs, media was collected. Cells were washed with PBS and trypsinized. PBS washed and trypsinized cells were added to the collected media in a single tube. Cells were pelleted, washed once with PBS and resuspended in Annexin binding buffer (BD Biosciences) at ~1 × 106 cells/mL. Cells were stained with propidium iodide (BD Biosciences) and Annexin V Cy5 (Biovision) according to the manufacturer's protocol and assayed on a LSRII flow cytometer (BD Biosciences).
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2

Endothelial Cell Apoptosis Assay

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Effects of the HF blood plasma (1 h and 24 h exposure) on the endothelial cell viability was assessed by annexin/PI apoptotic assay. Five samples were randomly selected from each blood plasma group and used in this assay. Ea.hy926 cells were seeded onto 6-well plates and grown for 24 h at 37°C. Then the cells were serum-starved for 2 h, followed by blood plasma addition to the medium (1% final concentration). After 1 h incubation with the blood plasma, cells were harvested and washed three times with ice-cold 1x PBS and resuspended in 1x annexin binding buffer (Biovision, Mountain View, CA). 1x105 of cells were collected and incubated with 5 μL of Annexin V-Cy5 (Biovision) and 1 μL (100 μg/mL) of propidium iodide (PI, InvitrogenTM) in the dark for 15 min at room temperature, after which 1x annexin binding buffer was added to make a total volume to be 300 μL. The percentages of apoptotic and necrotic cells were measured by flow cytometry (BD FACS CantoTM, Becton Dickinson, Franklin Lakes, NJ). The same protocol was applied to the cells, which were incubated with experimental blood plasma for 24 h. The experiments were performed in triplicates.
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3

Apoptosis and Mitochondrial Membrane Potential Assay

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Cells were stained with annexin V-Cy5 (BioVision, 1013; 1:1000 dilution) and propidium iodide (Immuno Chemistry Technologies, 638; 1:500 dilution) in annexin V binding buffer containing 10 mM HEPES (pH 7.4), 150 mM NaCl, 5 mM KCl, 1 mM MgCl2, and 1.8 mM CaCl2 for 15 min on ice. To assess mitochondrial membrane potential, cells were stained with 100 nM tetramethylrhodamine methlester (TMRM; Thermo Fisher Scientific, T668) in culture medium for 15 min room temperature. Bone marrow-derived mast cells suspended in staining buffer (PBS, 1% BSA, 0.1% NaN3) were pretreated with TruStain fcX (BioLegend, 101320) at 4 °C for 30 min and then stained with APC anti-mouse CD117 (BioLegend, 105811) and FITC anti-mouse FcεRIα (BioLegend, 134305) at 4 °C for 30 min. The cells were analyzed by flow cytometry using a FACSCanto II flow cytometer (BD Biosciences), and data were analyzed using FlowJo V10 software.
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4

Apoptosis Analysis by Flow Cytometry

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Cells were seeded at ~30%-40% confluence in 6 cm plates. After overnight incubation, media was aspirated and replaced with media with or without indicated drugs. After 72 hr, media was collected. Cells were harvested, rinsed once with PBS, and resuspended in Annexin binding buffer (BD Biosciences). Cells were stained with propidium iodide (BD Biosciences) and Annexin V Cy5 (Biovision) according to the manufacturer’s protocol and analyzed on a LSRII flow cytometer (BD Biosciences).
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5

Live/Dead Cell Staining and Annexin V Analysis

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Cell samples were washed in PBS before live/dead staining for 20 min on ice; the cells were then surface-stained for 20 min on ice in the presence of 2.4G2 hybridoma supernatant, fixed in 2% paraformaldehyde for 15 min on ice, and washed with PBS supplemented with 2% fetal bovine serum before analysis. For annexin V staining, nonfixed samples were incubated with annexin V–Cy5 for 5 min in annexin V staining buffer (BioVision) before analysis. Samples were analyzed on a CyAn ADP Analyzer (Beckman Coulter) or an LSR-II flow cytometer (BD Biosciences).
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6

Apoptosis Evaluation by Flow Cytometry

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The cells were detached from the plate by 0.05% trypsin, washed with PBS, and then incubated with annexin V-Cy5 (BioVision, Milpitas, CA, USA) or ethidium homodimer III (Takara Bio, Kusatsu, Japan) for 10 min. After washing the cells with annexin-binding buffer (BioVision), the cells were fixed with 2% paraformaldehyde, washed with PBS again, and analyzed using a BD FACSCalibur (Becton Dickinson, NJ, USA).
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7

TRAIL-induced Apoptosis Pathway Assay

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Recombinant human TRAIL and anti-His were obtained from R&D Systems (Minneapolis, MN). MG132, propidium iodide (PI), 3-(4,5-dimethyl-thiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), and anti-Flag-HRP were purchased from Sigma (St. Louis, MO). Rabbit anti-DTX1 polyclonal antiserum against GST-Deltex1 was generated as described9 (link). The following antibodies were obtained from Santa Cruz Biotech (Santa Cruz, CA): anti-caspase-3 (H-277), anti-DR4 (H130), anti-DR5 (N-19), anti-Mcl-1 (S-19), and anti-Bcl-2 (N-19). Annexin V-Cy5 was obtained from Biovision (Mountain View, CA). Anti-Myc (9B11), anti-caspase-8 (1C12), and anti-active caspase-3 (D175) were purchased from Cell Signaling (Beverly, MA). Anti-actin (clone C4) and anti-β-tubulin (clone AA2) were purchased from Millipore (Temecula, CA). Anti-human FLIP mAb (NF6) was purchased from AdipoGen (San Diego, CA). Horseradish peroxidase-conjugated secondary antibodies were purchased from Jackson ImmunoResearch Laboratories. WesternBright ECL HRP substrate was obtained from Advansta Corporation (Menlo Park, CA). Dapi-Fluoromount-GTM was obtained from SouthernBiotech (Birmingham, AL). Protein G Mag SepharoseTM Xtra was obtained from GE Healthcare (Piscataway, NJ).
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8

Assessing Gemcitabine Sensitivity in Pancreatic Cancer

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MIA PaCa-2R+lenti-hsamiR205 and MIA PaCa-2R+lenti-hsamiRScramble cells were treated with 500 nM GEM after 72 h of culture. After 72 h of post-treatment, floating and attached cells were harvested, washed with cold PBS and fixed in 1 mL of 70% ethanol overnight at -20 °C. The next day, cells were washe d and resuspended in 500 μl FxCycle PI/RNase staining solution (Molecular Probes) and analyzed by an FACSCalibur flow cytometer. For apoptosis analysis, harvested cells were resuspended in 500 μl of 1× Annexin V binding buffer, 5 μl of Annexin V-Cy5, 5 μl of PI (BioVision Inc.) and analyzed by an FACSCalibur flow cytometer.
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9

Quantifying Irradiation-Induced Apoptosis

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Seventy-two hours after irradiation, cells and media were collected, centrifuged, and resuspended in Annexin binding buffer with cell density adjusted to ~106/ml. Cells were stained with propidium iodide (Sigma-Aldrich) and Annexin V-Cy5 following the manufacturer’s protocol (BioVision, Milpitas, CA), and then analyzed by a LSRII flow cytometer (BD Biosciences, San Jose, CA). Senescence-associated β-galactosidase staining was performed using a commercial kit (Cell Signaling, #9860) as described (23 (link)).
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10

Quantifying ROS and Apoptosis in Cells

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To measure ROS in cells, 2′, 7′ dichlorodihydrofluorescein diacetate (H2DCF-DA) fluorescent probe (Invitrogen) was employed at a concentration of 10 µM and detected by flow cytometry (SORP 4 Laser BD LSRII (BD Biosciences)) using standard protocol (Ameziane-El-Hassani and Dupuy, 2013 ). For quantification of apoptosis, cells and media were collected, centrifuged, and resuspended in Annexin binding buffer with cell density adjusted to approximately 106/mL 48 hours after treatment with olaparib. Cells were stained with propidium iodide (Sigma-Aldrich) and Annexin V–Cy5 following the manufacturer’s protocol (BioVision), and then analyzed by flow cytometry.
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