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20 protocols using ecl chemiluminescence reagent

1

Glioma Stem Cell and Xenograft Model

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The human glioma stem/progenitor cell line SU3 and nude mice expressing EGFP (NC-CB57/6J-EGFP) were prepared by our laboratory [4 (link), 5 (link)]. The remaining reagents were purchased from companies as follows: rat C6 glioma cell line (Shanghai Institutes for Biological Sciences), RFP transgenic kit (Genechem, Shanghai), γ-secretase inhibitors DAPT (GSI-IX) (Selleck), Dulbecco's Modified Eagle's Medium (Gibco), fetal bovine serum (Hyclone), Caspase—Glo 3/7 assay kit (Promega), Trizol solution (Invitrogen), reverse transcription kit (Fermentas), ECL chemiluminescence reagent, trypan blue, GAPDH antibody (Biyuntian, Shanghai), Notch-1, NICD, Bcl-2 and pAKT antibodies (Cell Signal), 2', 3'-cyclic nucleotide 3' phosphodiesterase (CNP) monoclonal antibody (Abcam), qPCR apparatus and SYBR Green qPCR Mix (BioRad), apoptosis kit (BD), flow cytometry instrument (Beckman), inverted fluorescence microscope (Carl Zeiss), linear accelerator (Siemens Primus), and in vivo fluorescence imaging system (Maestro EX, CRi).
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2

Ovarian Cancer Cell Line Characterization

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Human ovarian cancer epithelial cell line OVCAR3 and human normal ovarian epithelial cell line IOSE80 were purchased from ATCC cell bank in the United States. Cell culture reagents (DEME medium, fetal bovine serum, streptomycin penicillin, trypsin) were purchased from Gibco, USA. Cell proliferation activity assay Kit CCK-8 was purchased from Tongren Institute of Chemistry, Japan. miRNA extraction kit, miRNA reverse transcription and fluorescence quantitative kit, and Lipofectamine TM 2000 transfection kit were all purchased from Invitrogen, USA. Mir-30b-3p, mimics and mimic control miRNAs were synthesized by Shanghai Gemar Pharmaceutical Technology Co., LTD., China. Mir-30b-3p and U6 primers were designed and synthesized by bioengineering (Shanghai) Co., LTD., China. ECL chemiluminescence reagent and BCA protein concentration detection kit were purchased from Shanghai Biyuntian Biotechnology Co., LTD., China. The dual luciferase report detection system is the product of Promega, USA.
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3

Comprehensive Protein Expression Analysis

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Cells or Exos were isolated and denatured in RIPA buffer (Ambion, USA) for total protein. Total protein (20 μg) was separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gel and transferred onto PVDF membranes (DOCLAB, Korea). Membranes were blocked in 5% nonfat milk for 1 h, then incubated overnight at 4°C with primary antibodies (all from bioswamp, at 1 : 1000 dilution), including anti-IL-12, anti-Arg1, anti-iNOS, anti-CD206, anti-Caspase-3, anti-Bcl2, anti-c-myc, anti-Grb10, and anti-GAPDH antibodies, followed by incubation with secondary antibodies anti-Rabbit IgG (bioswamp, 1 : 20000 dilution) for 1 h at 25 ± 2°C, and visualization using the ECL chemiluminescence reagent (Beyotime, Jiangsu, China).
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4

Western Blot Analysis of Wnt3A and β-Catenin

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Briefly, cells were washed in pre-cooling PBS buffer three times, and the total protein was separated by RIPA buffer (Beyotime, Shanghai, China). Protein concentration was detected by using BCA protein assay kits (CoWin Biotechnology, Cambridge, MA, USA). An equal amount of total proteins was electrophoresed to SDS-PAGE. Then, they were transferred to the polyvinylidene difluoride membranes (PVDF; Millipore, Boston, MA, USA) with blocked by 5% non-fat milk at room temperature for 1 h. The protein was identified by incubated with specific primary antibodies WNT3A (Rabbit Anti- WNT3A antibody, ab231178, 1:3000; Abcam, Cambridge, MA, USA), β-catenin (Rabbit Anti-beta Catenin antibody, ab6302, 1:3000; Abcam) and β-actin (Rabbit Anti-beta Actin antibody, ab8227, 1:3000; Abcam) overnight at 4 °C. Then, the membranes were further incubated with HRP-conjugated goat anti-rabbit immunoglobulin G secondary antibody (ab205718, 1:1500; Abcam) and the bands on the membranes were visualized by the ECL chemiluminescence reagent (Beyotime). The β-actin was used to normalize the amount of the analyzed samples and protein bands were quantified by gray value analysis by ImageJ software.
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5

Western Blot Protein Analysis

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The Western blot assay was processed as described previously (Wang et al., 2018). Briefly, the cells were broken down using a lysis buffer supplemented with 1 mM PMSF and then homogenized for 10 min (11,000× g, 4 °C). The supernatants were collected and then denatured with 4× loading buffer at 95 °C for 10 min. The BCA protein assay kit was used to determine the protein concentration. Subsequently, the proteins were separated by 10–15% SDS-PAGE, and then transferred onto a PVDF membrane, which was blocked with 5% nonfat milk dissolved in TBST at room temperature for 2 h. Next, they were incubated with primary antibodies (1:1000), including anti-NDUFA4, anti-SDHA, anti-UQCRQ, anti-COX17, anti-ATP6V1B2, anti-ATP8B2, and anti-β-actin. After incubation overnight at 4 ℃, the blots were washed three times for 20 min before incubating with the secondary antibody at room temperature for 2 h. The blots were detected using a hypersensitive ECL chemiluminescence reagent (Beyotime) and exposed to a Chemiluminescent imaging system (Bio-Rad). Image J software was used to quantitate the protein intensity.
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6

Molecular Mechanisms of Neuroinflammation

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The Hip and mPFC tissues were dissociated by radio-immunoprecipitation assay solution containing protease inhibitors and phosphatase inhibitors. The proteins in the samples were run on 10% SDS polyacrylamide gel and then transferred to polyvinylidene fluoride membrane (Millipore, USA). The proteins were incubated with Rabbit anti-Sirt1 (1:1000, Abcam, ab189494), Rabbit anti-Nrf2 (1:1000, Proteintech, 16396-1-AP), Rabbit anti-HO-1 (1:1000, Proteintech, 10701-1-AP), Rabbit anti-Gpx4 (1:3000, Abcam, ab125066), Rabbit anti-TLR4 (1:1000, Abcam, ab217274), Rabbit anti-NF-κB p65 (phospho S536) (1:1000, Abcam, ab76302), Rabbit anti-NF-κB p65 (1:1000, Cell Signaling, 8242) and Mouse anti-GAPDH (1:10,000, Abcam, ab8245) overnight at 4 °C, and secondary anti-mouse HRP-conjugated (1:10,000, Bio-rad, 170-6516) or secondary anti-rabbit HRP-conjugated antibodies (1:10,000, Bio-rad, 170-6515) were incubated for 2 h at room temperature. The signals were visualized using ECL chemiluminescence reagent (Beyotime; US Everbright Inc.).
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7

Quantitative Western Blot Analysis

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The protein lysate was analyzed by SDS-PAGE and transferred to PVDF membranes (Bio-Rad Laboratories, Hercules, CA, USA). The membrane was blocked with 5% fat-free milk in PBST for 30 min, followed by incubation overnight at 4 °C with final dilution of primary antibodies against CXCL12 (Cat No. #3530), IL8 (Cat No. #94407), TGF-β (Cat No. #3711), HGF (Cat No. #52445), mTOR (Cat No. #2983), AKT (Cat No. #4685), AMPK (Cat No. #5831), LC3II/I (Cat No. #4108), ATG5 (Cat No. #12994), p-mTOR (Cat No. #5536), p-AMPK (Cat No. #50081), p-AKT (Cat No. #4060) or GAPDH (Cat No. #5174) all from CST (Beverly, MA, USA). Antibodies on membranes could be stripped using stripping buffer (Cat No. ab270550, Abcam, Cambridge, MA, USA) with gently shaking at 52 °C for 30 min for other blotting examination. Protein bands hybridized with primary and secondary antibodies on membranes were detected using ultrasensitive ECL chemiluminescence reagent (Beyotime Biotechnology, Shanghai, China) and exposed to film. Band intensity was quantified as the mean ± SD of three independent experiments.
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8

Quantifying Protein Expression Levels

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1×106 cells/well were plated in a 6-well plate and grown for 24 h until about 70% confluence. After cells were treated by siRNAs for 48 h, they were harvested and lysed in RIPA buffer (Pierce, USA). Total protein was separated by polyacrylamide gel electrophoresis (PAGE) and electroblotted onto polyvinylidine difluoride filter (PVDF) membranes (Millipore, USA), followed by blocking with 5% skim milk in TBST (20 mM Tris, 150 mM NaCl, 0.05% Tween-20, pH7.5) buffer for 2 h at room temperature, then incubated with rabbit-anti-human NET-1 antibody (1:500 dilution, Abgent, USA), rabbit-anti-human EMS1 (1:500 dilution, Abcam, USA) and rabbit-anti-human VEGF antibody (1:500 dilution, Abcam, USA), mouse-anti-human β-actin antibody (1:500 dilution, Abcam, USA) as internal control. Then membranes were washed in TBST and incubated with a goat anti-rabbit or goat anti-mouse HRP-conjugated secondary antibody (1:1000 dilution, Jackson, USA) at room temperature for 2 h. At last, the specific proteins were detected with ECL chemiluminescence reagent (Beyotime, China); the membranes were exposed to films (Kodak, USA).
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9

Platelet Protein Extraction and Analysis

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The collected platelet or cell sample was added with strong RIPA lysate (Wuhan Boster Biological Technology Co., Ltd., China) protein (including the phosphoric acid protease inhibitor and PMSF protease inhibitor); then, it was oscillated intensely for 5 min, and it had lysis on ice for 1 h. Next, it was centrifuged for 5 min under 12000 r/min, and the supernatant was collected, which was the total protein. The BCA Protein Quantitation Kit (Shanghai Beyotime Biotechnology Company, China) was used to measure the protein concentration, and after dilution, the 4x SDS loading buffer was used to boil and process the sample. The SDS-PAGE protein electrophoresis was conducted, and then, the protein was transferred to the PVDF membrane (Millipore, USA). It was added with 5% skim milk and sealed under 37°C for 2 h. Next, the primary antibodies were added for overnight incubation under 4°C (antibodies GAPDH, ERK1/2, P38, JNK, and PAR-1, and phosphorylated antibodies ERK1/2, P38, and JNK). After it was thoroughly washed using TBST, second antibodies were added for incubation under 37°C for 1 h. Then, the ECL chemiluminescence reagent (Beyotime, China) was used for color development, and the chemiluminescence imaging system (Bio-Rad, USA) was used to collect and analyze the images.
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10

Asiatic Acid Impact on Cell Viability

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DMEM (high sugar) was obtained from Invitrogen Gibco (Grand Island, NY, USA), FBS from Science Cell Research Laboratories (Carlsbad, CA, USA), and CCK8 cell viability test kit from Nanjing Enogene Biotech Co., Ltd. (Nanjing, China). Asiatic acid was supplied by the client. Transwell chambers with a pore size of 8.0 μm were purchased from Corning Incorporated (Corning, NY, USA), with REF 3422 and LOT 14416045, and BD Matrigel Matrix (Basement Membrane) from BD Biosciences (San Jose, CA, USA), and anti-WAVE3 rabbit anti-human/mouse antibody E 20–74899 from Nanjing Enogene Biotech. Anti-P53 rabbit anti-human/mouse antibody, E11-10276C; EnoGene anti-NF-κB rabbit anti-human antibody, E10-20406; EnoGene anti-p-PI3K rabbit anti-human/mouse antibody, E011508-2 and E1A7005A; and EnoGene anti-GAPDHrabbit anti-human/mouse antibody, E90062, were obtained from Nanjing Enogene Biotech Co., Ltd. (Nanjing, China). The hydrophobic PVDF membrane was purchased from Merck Millipore (Billerica, MA, USA). ECL chemiluminescence reagent was obtained from Beyotime Biotechnology (Shanghai, China), and P0018A, RIPA lysate, BSA, prestaining protein marker, HRP labeled goat anti-rabbit secondary antibody, developer, fixing solution, and BCA protein concentration test kit were purchased from Nanjing Enogene Biotech. Co., Ltd (Nanjing, China).
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