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Zen 2 blue edition version 2

Manufactured by Zeiss

ZEN 2 blue edition version 2.0 is a software platform developed by ZEISS for the acquisition, processing, and analysis of microscopy data. The software provides a comprehensive suite of tools for image capture, visualization, and analysis, catering to the needs of various microscopy techniques.

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3 protocols using zen 2 blue edition version 2

1

Venous Remodeling Histomorphometric Analysis

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We analyzed 3–5 outflow veins per animal per group for histomorphometric analysis. Sections were stained for Hematoxylin and Eosin (H and E) to assess venous remodeling. Images were digitized to capture a minimum of 1936 × 1460 pixels covering one entire cross-section utilizing an M2 Microscope (Carl Zeiss) with an Axiocam 503 color camera (Carl Zeiss). These slides were analyzed using ZEN 2 blue edition version 2.0 (Carl Zeiss) as described elsewhere4 (link),11 (link),16 (link),30 (link). We measured the lumen vessel area, neointima, media, and adventitia areas, along with cell density in each of the layers.
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2

Quantitative Histological Analysis of Venous Remodeling

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Hematoxylin and eosin stained outflow veins to assess venous remodeling were assessed. Images were digitized to capture a minimum of 1936×1460 pixels, covering one entire cross‐section using an M2 Microscope (Carl Zeiss) with an Axiocam 503 color camera (Carl Zeiss). These slides were analyzed using ZEN 2 blue edition version 2.0 (Carl Zeiss), as described elsewhere.9, 10, 14, 15, 16 In addition, slides stained for Masson trichrome, TUNEL, smooth muscle actin (SMA), cluster of differentiation (CD) 68, inducible NO synthase (iNOS), myosin heavy chain (MYH11), arginase 1 (Arg‐1), fibroblast specific protein‐1 (FSP‐1), phospho Mothers Against Decapentaplegic Homolog 3 (pSMAD3), MMP‐9, collagen 1, and Ki‐67 were digitized and quantified, as described elsewhere.9, 10, 14, 15, 16 The index for each stain (TUNEL, SMA, CD68, iNOS, MYH11, Arg‐1, FSP‐1, pSMAD3, MMP‐9, collagen 1, and Ki‐67) was calculated as follows: (number of total cells positive for that stain/total number of cells)×100.
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3

Immunofluorescent Microscopy for Cell Quantification

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Sections that were stained with immunobiological stains and immunofluorescent stains were digitized to capture a minimum of 1936 × 1460 pixels covering one entire cross-section utilizing an M2 Microscope (Carl Zeiss) with an Axiocam 503 color camera (Carl Zeiss). These slides were analyzed using ZEN 2 blue edition version 2.0 (Carl Zeiss) as described elsewhere4 (link),11 (link),16 (link),30 (link). Staining index was obtained by number of positive cells/ total number of cells × 100.
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