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4 protocols using alexa fluor 488 labeled donkey anti rabbit antibody

1

Immunofluorescence Staining of Cells

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Cells were seeded into six-well plates. After treatment, the cells were fixed with 4% PFA for 20 min. Then, the cells were permeabilized for 5 min in PBS with 0.25% Triton X-100 (T8787; Sigma-Aldrich). After blocking with 5% goat serum for 30 min, the cells were incubated overnight at 4°C with a primary antibody in a humidified box. The tissues were treated with a secondary antibody (Alexa Fluor 488–labeled donkey anti-rabbit antibody; Invitrogen) for 1 h, after washing for three times with 0.1% TBST. Finally, DAPI (P0131; Beyotime) was added to the cells to stain the cellular nucleus.
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2

Immunostaining of Cochlear Tissues

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Cochlear explants or zebrafish larvae were fixed with 4% paraformaldehyde for 1 h, washed three times with PBS, and permeabilized with 1% Triton X-100 in PBS at 25°C for 10 min. Permeabilized samples were then blocked with 10% bovine serum albumin in PBS for 1 h, followed by incubation with the primary antibodies overnight at 4°C. The primary antibodies used in this experiment were myosin VIIa rabbit polyclonal antibody (25–6790; Proteus Biosciences) and GFP polyclonal antibody (A11122; Invitrogen). The samples were rinsed three times with PBS and incubated with the relevant secondary antibodies at 37°C for 1 h away from light. The secondary antibodies were goat antirabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor Plus 555 (A32732; Invitrogen), and Alexa Fluor 488-labeled donkey antirabbit antibody (A21206; Invitrogen). The nuclei were labeled with DAPI (D523; Dojindo Laboratories) for 10 min at room temperature, and the fluorescent signals were captured under a fluorescence microscope.
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3

Molecular Mechanisms of XZK-mediated Cardioprotection

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XZK powder was kindly provided by the WBL Peking University Biotech Co., Luye Pharma Group (Beijing, China). 7-ketocholesterol (7-KC), Oil red O and sirius red were purchased from Sigma-Aldrich (St. Louis, MO, USA). Atorvastatin was obtained from Pfizer Ltd. (New York, NY, USA). The antibodies against α-actin, β-actin, MMP8, MMP13, TNFα, phosphorylated IRE1α (p-IRE1α), IRE1α, eIF2α, PERK and IκBα were from Abcam (Cambridge, MA, USA); antibodies against BiP, phosphorylated PERK (p-PERK), phosphorylated eukaryotic initiation factor 2α (p-eIF2α), spliced x-box binding protein 1 (s-XBP1), cleaved PARP, and active caspase-3 were from Cell Signaling Technology (Beverly, MA, USA); and antibodies against CCAAT-enhancer-binding protein homologous protein (CHOP) and ATF6 were from Santa Cruz Biotechnology Inc. (Santa Cruz, CA, USA). Secondary antibodies including Alexa Fluor 488-labeled donkey anti-rabbit antibody, Alexa Fluor 647-labeled goat anti-rat antibody, and Alexa Fluor 555-labeled donkey anti-mouse antibody were from Invitrogen (Carlsbad, CA, USA). The TUNEL assay kit (In Situ Cell Death Detection kit) was from Roche (Mannheim, Germany), real-time PCR (qPCR) reagent kits were from TAKARA Biotechnology (Dalian, China), and 6-diamino-2-phenylindole (DAPI) was from Beyotime Biotechnology (Shanghai, China).
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4

Immunofluorescence Staining of Lung Tissue

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Paraffin sections were de-waxed in Histo-Clear solutions twice (National Diagnostics) and rehydrated first in absolute ethanol three times, and then once each in 90% ethanol, 70% ethanol and 50% ethanol. H&E staining was processed according to standard protocol. For immunofluorescence staining, antigen retrieval was performed by incubating the lung sections with proteinase K solution (Sigma-Aldrich, 20 mg/ml proteinase K in 50 mM Tris-Cl, 1 mM EDTA, pH 8.0) at 37°C for 30 min. Sections were then blocked in blocking buffer (3% BSA, 0.2% Triton X-100 in PBS) for 1 hr. Polyclonal rabbit anti-CCSP (also known as SCGB1A1) antibody (US Biological, catalogue number C5828) was used at 1:100 dilution. Goat anti-pro-SPC antibody (Santa Cruz Biotechnology, catalogue number sc-7706) and goat anti-Podopanin antibody (R&D Systems, catalogue number AF3244) were used at 1:100 dilution. Incubation was performed at 4°C overnight in blocking buffer. Secondary Alexa Fluor 488-labeled donkey anti-rabbit antibody (Invitrogen, catalogue number A21206) and Alexa Fluor 546-labeled donkey anti-goat antibody (Invitrogen, catalogue number A11056) were used at 1:100 dilution. Incubation was performed at room temperature for 1 hr. Cover slips were mounted on stained sections with antifade reagent containing DAPI (Invitrogen).
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