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4 protocols using ab13586

1

Western Blot Analysis of Apoptotic Proteins

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Proteins were extracted from cells of each group and their concentration was determined by BCA Kit (Biyuntian Biotech Company, China) according to instructions. The protein extracts were added with loading buffer and boiled for 10 min at 95 °C. Each well was loaded with 30 μg of samples. Then, 10% polyacrylamide gel electrophoresis (PAGE) was used to isolate proteins before polyvinylidene fluoride (PVDF) (Millipore, USA) transmembrane and 1 hr of closing with 5% bovine serum albumin (BSA) at room temperature. Later, primary antibodies BAK1 (ab104124, Abcam Company), caspase-3 (ab13586, Abcam Company), Bax (ab32503, Abcam Company), Bcl-2 (ab32124, Abcam Company), and β-actin (ab8226, Abcam Company) were added respectively for overnight incubation at 4 °C. Later, after washing with TBST (Tris-buffered saline with Tween 20) for 5 min×3 times, horseradish peroxidase- conjugated IgG secondary antibodies (Jackson Labs) were added for 1 hr of incubation at room temperature. Finally, the proteins were visualized by the chemilu -minescence reagent and analyzed Bio-rad Gel Dol EZ imager (GEL DOC EZ IMAGER, Bio-rad, California, USA). Grey value analysis of the target band was analyzed using software image J. We took β-actin as the internal reference gene.
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2

Western Blot Analysis of Apoptosis Markers

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Cells were washed with PBS and lysed on ice in RIPA buffer (V900854, Sigma) containing a cocktail of protease inhibitors (P8340, Sigma) following the manufacturers protocols. Protein concentration was measured using the BCA assay. The protein fractions were suspended in loading buffer and denatured at 100°C for 5 min. Total proteins (20 µg/lane) were separated on 12% SDS-PAGE and transferred to PVDF membranes, which were blocked in 5% fat free milk in TBST buffer (0.1% Tween-20) for 2 h at room temperature. BRCA1 levels were analyzed using a mouse monoclonal anti-BRCA1 antibody (1:1,000; ab16780; Abcam); Bcl-2, Bax, pro-caspase-3, cleaved-caspase-3, and cytochrome c levels were detected using the following mouse or rabbit monoclonal antibodies at a dilution of 1:1,000: ab117115, ab5714, ab13586, ab32042, and ab13575, respectively (Abcam). The secondary antibodies used were goat anti-rabbit antibody (1:1,000; Sc2030; Santa Cruz Biotechnology) and rabbit anti-mouse antibody (1:1,000; Sc358917; Santa Cruz Biotechnology). GAPDH was used as the endogenous control to normalize the expression levels of the proteins of interest. GAPDH levels were detected using HRP-conjugated mouse anti-GAPDH monoclonal antibody (1:5,000; HRP-60004, Proteintech). The densitometry scan of the western blotting was performed by Image Pro Plus 6.0 (Media Cybernetics, Inc., Rockville, MD, USA).
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3

Protein Expression Analysis via Western Blotting

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Cell lysates were prepared in RIPA buffer (Beyotime, Shanghai, China) containing protease inhibitor cocktail (Roche, Germany) by incubating for 20 min at 4°C. The protein concentrations were determined using a BCA Protein Assay kit (Thermo Fisher Scientific., Rockford, IL, U.S.A.). SDS/PAGE separation gel (10%) was prepared. Equal amount of total proteins was separated by SDS/PAGE (10% gels) transferred on to a PVDF membrane (PerkinElmer, Boston, MA) incubated with primary antibodies overnight. The blots were subsequently incubated with HRP-conjugated secondary antibodies. An Odyssey double color infrared laser imaging system (LI-COR, Lincoln, NE, U.S.A.) was used for scanning and data analyses. GAPDH was used as the internal control for the normalization of the data. The related primary antibodies were anti-GAPDH (dilution 1:2000, Santa Cruz Biotechnology, Santa Cruz, CA), anti-p53 (dilution 1:100, Abcam, Cambridge, MA, U.S.A.; ab28), anti-NF-κB p65 (dilution 1:1000, Abcam, ab76026), anti-mTOR (dilution 1:1000, Abcam, ab2732), anti-β-catenin (dilution 1:500, Abcam, ab6302), anti- caspase-3 (dilution 1:1000, Abcam, ab13586), anti-Bcl-2 (dilution 1:1000, Abcam, ab32124), anti-LC3 (dilution 1:1000, Abcam, ab128025).
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4

Whole-Cell Protein Extraction and Western Blot

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Cells were washed by cold PBS, the whole-cell lysate was prepared with RIPA (50 mM Tris, PH 8.0), supplemented with 1% protein phosphatase inhibitors and 1 mM PMSF (Beyotime, Shanghai, China), followed by frequent mixing and being placed on ice for 30 min. When the lysate began to become clear, the protein was centrifuged at 4 °C at 12000 rpm for 15 min. The concentration of proteins was measured by the Bio-Rad DC protein assay (Bio-Rad, USA). Where indicated, 10 or 15 mg protein was boiled and mixed well with SDS buffer according to a certain ratio for 15 min. Protein samples were separated and transferred onto the PVDF membranes (Bio-Rad, USA) by 10% SDS-PAGE. Following 100 min of blocking in phosphate-buffered saline with 5% fat-free milk, membranes were incubated with the following antibodies: primary antibody: TP53INP1 (ab154877, Abcam, 1:2000); Bcl-2 (ab196495, Abcam, 1:1500); Caspase-3 (ab13586, Abcam, 1:5000); Bax (23931-1-AP, Proteintech, 1:1000); Bak-1 (24552-1-AP, Proteintech, 1:1000) and β-actin (sc-130065,Santa Cruz, 1:3000) together with secondary antibody: goat anti-rabbit IgG-HRP (sc-2004, Santa Cruz, 1:5000) and goat anti-mouse IgG-HRP (sc-2005,Santa Cruz, 1:5000). Bands were visualized using ChemiDoc XRS + system and Bio-Rad-Image-Lab-Software-5.2.1.
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