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6 protocols using horseradish peroxidase conjugated goat anti rabbit or anti mouse igg

1

Western Blot Analysis of Spermatogenic Proteins

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Total protein was isolated in RIPA buffer supplemented with 1 mM PMSF (Sigma) and a protease inhibitor cocktail (Sigma P8340). Lysates were cleared by centrifugation at 14,000 × g for 10 min at 4 °C, and protein concentrations in supernatants were determined (DC protein assay; BioRad). Equal amount of protein from each sample was mixed with LDS sample buffer (Invitrogen) plus sample reducing agent (Invitrogen), and denatured for 10 min at 70°C. Proteins were resolved in 4−12% Bis-Tris gels (Invitrogen), and transferred to PDVF membranes. Blots were probed with antibodies against Stra8 (Abcam Catalog# ab49602), Plzf, or pan-Actin (NeoMarkers Catalog# MS-1295), washed and reacted with horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse IgG (BioRad). Detection was performed with the Clarity™ ECL Western Blotting Substrate (BioRad).
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2

Western Blot Analysis of Proteins

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The protein samples were separated on 8 or 10% SDS-PAGE gels and transferred to nitrocellulose membranes (Perkin Elmer, Waltham, Massachusetts, USA). The membranes were blocked in Tris-buffered saline (20 mM Tris-HCl, pH 7.4, and 150 mM NaCl) containing 0.1% Tween 20 and 5% nonfat dry milk, incubated with primary antibodies for 1 h at room temperature or overnight at 4°C, subsequently incubated with horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse IgG (Bio-Rad, Hercules, CA, USA) and enhanced using a chemiluminescence detection reagent (Pierce Chemical, Thermo Fisher Scientific, Waltham, Massachusetts, USA).
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3

Immunoblot Analysis of Protein Expression

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Immunoblot analysis was performed as described previously (52 (link)). Briefly, 1 mL of culture was collected and resuspended in lysis buffer (20 mM Tris pH 7.0, 10 mM MgCl2 and 1mM EDTA, 1 mg/mL lysozyme, 10 μg/mL DNase I, 100 μg/mL RNase A, 1 mM PMSF) to a final OD600 of 10 for equivalent loading. The cells were incubated at 37 °C for 15 min followed by addition of an equal volume of Laemelli sample buffer (0.25 M Tris pH 6.8, 4% SDS, 20% glycerol, 10 mM EDTA) containing 10% β-mercaptoethanol. Samples were heated for 15 min at 65 °C prior to loading. Proteins were separated by SDS-PAGE on 12.5% polyacrylamide gels, electroblotted onto Immobilon-P membranes (Millipore) and blocked in 5% nonfat milk in phosphate-buffered saline (PBS) with 0.5% Tween-20. The blocked membranes were probed with anti-SigA (1:10,000) (53 (link)), anti-His (1:4,000) (GenScript), anti-GFP (1:10,000) (54 (link)) antibodies diluted into 3% BSA in PBS with 0.05% Tween-20. Primary antibodies were detected using horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse IgG (BioRad) and the Super Signal chemiluminescence reagent as described by the manufacturer (Pierce). Signal was detected using a Bio-Techne FluorChem R System.
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4

Western Blot Analysis of Autophagy Markers

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Total protein was isolated in RIPA buffer supplemented with 1 mM PMSF (Sigma) and protease inhibitor cocktail (Sigma P8340). Lysates were cleared by centrifugation at 14,000 X g for 10 min at 4°C, and protein concentrations in supernatants were determined (DC protein assay; BioRad). Equal amount of protein from each sample was mixed with LDS sample buffer (Invitrogen) plus sample reducing agent (Invitrogen), and denatured for 10 min at 70°C. Proteins were resolved in Bis-Tris gels (Thermo Fisher), and transferred to PDVF membranes. Blots were probed with antibodies against LC3A/B (12741, Cell Signaling Technology; 1:1,000 dilution), p62 (ab56416, Abcam; 1:20,000 dilution), GFP (sc-9996, Santa Cruz Biotechnology; 1:1,000 dilution), or pan-actin (MS-1295, Thermo Fischer; 1:1,000 dilution), washed and reacted with horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse IgG (BioRad). Detection was performed with the Clarity ECL Western Blotting Substrate (BioRad).
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5

Immunoblot Analysis of Bacterial Proteins

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Immunoblot analysis was performed as described previously (Wang et al. 2015 (link)). Briefly, 1 mL of culture was collected and resuspended in lysis buffer (20 mM Tris at pH 7.0, 10 mM MgCl2, 1 mM EDTA, 1 mg/mL lysozyme, 10 µg/mL DNase I, 100 µg/mL RNase A, 1 mM PMSF, 1 µg/mL leupeptin, 1 µg/mL pepstatin) to a final OD600 of 10 for equivalent loading. The cells were incubated for 10 min at 37°C, followed by addition of an equal volume of sodium dodecyl sulfate (SDS) sample buffer (0.25 M Tris at pH 6.8, 4% SDS, 20% glycerol, 10 mM EDTA) containing 10% 2-mercaptoethanol. Samples were heated for 15 min at 65°C prior to loading. Proteins were separated by SDS-PAGE on 12.5% polyacrylamide gels, electroblotted onto immobilon-P membranes (Millipore), and blocked in 5% nonfat milk in phosphate-buffered saline (PBS) with 0.5% Tween-20. The blocked membranes were probed with anti-LytE (1:10,000) (Dobihal et al. 2019 (link)), anti-SigA (1:10,000) (Fujita and Sadaie 1998 (link)), anti-His (1:4000; Sigma), and anti-GFP (1:10,000) (Rudner and Losick 2002 (link)) antibodies diluted into 3% BSA in PBS with 0.05% Tween-20. Primary antibodies were detected using horseradish peroxidase-conjugated goat antirabbit or antimouse IgG (Bio-Rad) and the Super Signal chemiluminescence reagent as described by the manufacturer (Pierce). Signal was detected using a Bio-Techne FluorChem R system.
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6

Immunoblot Analysis of Protein Samples

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Immunoblot analysis was performed as described previously (53 (link)). Briefly, 1 mL of culture was collected and resuspended in lysis buffer (20 mM Tris pH 7.0, 10 mM MgCl2 and 1mM Ethylenediaminetetraacetic Acid (EDTA), 1 mg/mL lysozyme, 10 µg/mL DNase I, 100 µg/mL Rnase A, 1 mM PMSF) to a final OD600 of 10 for equivalent loading. The cells were incubated at 37 °C for 15 min followed by addition of an equal volume of Laemelli sample buffer (0.25 M Tris pH 6.8, 4% SDS, 20% glycerol, 10 mM EDTA) containing 10% β-mercaptoethanol. Samples were heated for 15 min at 65 °C prior to loading. Proteins were separated by SDS-PAGE on 12.5% polyacrylamide gels, electroblotted onto Immobilon-P membranes (Millipore), and blocked in 5% nonfat milk in phosphate-buffered saline (PBS) with 0.5% Tween-20. The blocked membranes were probed with anti-SigA (1:10,000) (54 (link)), anti-His (1:4,000) (GenScript), and anti-GFP (1:10,000) (55 (link)) antibodies diluted into 3% Bovine Serum Albumin (BSA) in PBS with 0.05% Tween-20. Primary antibodies were detected using horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse IgG (BioRad) and the Super Signal chemiluminescence reagent as described by the manufacturer (Pierce). Signal was detected using a Bio-Techne FluorChem R System.
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