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28 protocols using t butanol

1

Preparation of Cells for SEM Imaging

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For SEM images, the culture medium was aspirated from the PDMS-chip, and spheroids were washed 3X with PBS. They were then fixed with a mixture of 2.5% glutaraldehyde (FUJIFILM Wako Laboratory Chemicals) and 2% formaldehyde for 1 h at room temperature and washed with PBS one more time. Fixed spheroids were treated with 1% osmium tetroxide (OsO4) solution (Electron Microscopy Sciences, Hatfield, USA) in PBS for 1 h at 4 °C, washed with Milli-Q water and dehydrated by successive treatment with 30%, 50%, 70%, 90% ethanol solution (FUJIFILM Wako Laboratory Chemicals), for 5 min each, followed by washing 3X with 100% ethanol solution, 5 min each, at room temperature. Ethanol was exchanged with t-butanol by washing the spheroids 2X with 100% t-butanol (Sigma-Aldrich). The samples were first kept at 4 °C for 1 h, transferred to −30 °C for 1 h, and finally lyophilized in a freeze dryer overnight (pressure = 10 Pa, temperature = −45 °C). The SEM images were obtained from a Miniscope TM-1,000 SEM (Hitachi, Tokyo, Japan).
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2

Quantifying Aldehyde Adsorption on Activated Carbon

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Example 8

Procedure for Determining Aldehyde Adsorption on Activated Carbon. Formaldehyde:

A solution of 1 wt % formaldehyde was prepared by dissolving 0.020 g of solid paraformaldehyde (Sigma-Aldrich) in 1.98 g of D2O (Cambridge Isotopes). To this was added 0.1 mL t-butanol (Sigma-Aldrich, dried over 4A molecular sieves) as an internal 1H NMR standard. A similar procedure was followed with acetaldehyde (Sigma-Aldrich). To 1.0 mL of 1.0 wt % aldehyde solution was added 10 mg of activated carbon. The mixture was stirred for 30 min before filtration. Disappearance of aldehyde in the supernatant was quantified by inverse-gated decoupling 13C NMR using the tert-butanol signal at δ 29.5 ppm as internal standard.

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3

Oxidative Transformation of Sulfamethoxazole

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The precursor salt Ce(NO3)3·6H2O (analytical grade, CAS number: 10277-43-7) and sulfamethoxazole (SMX, C10H11N3O3S, 99+%, CAS number: 723-46-6) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Sodium persulfate (SPS, Na2S2O8 99%, CAS number: 7775-27-1) was purchased from Scharlau (Barcelona, Spain). Most of the experiments were carried out in ultrapure water (UPW: pH = 6.5). Other matrices included (i) commercially available bottled water (BW: pH = 7.7, conductivity 355 μS cm−1, containing (in mg L−1): 237 bicarbonate; 3.7 chloride; 7.8 sulfate; 1.1 nitrate; 75.5 calcium; 5.1 magnesium; 2.1 sodium; and 0.65 potassium ions); (ii) secondary treated wastewater (WW) taken from the University of Patras campus treatment plant (pH = 8, conductivity = 1.682 mS cm−1, total organic C = 2.46 mg L−1, chemical oxygen demand = 48.53 mg L−1, total suspended solids = 22 mg L−1, [Cl] = 262.41 mg L−1, [PO43] = 14.98 mg L−1, [HCO3] = 278 mg L−1, [Br] = 165.64 mg L−1, [Ca2+ ] = 112 mg L−1); and (iii) UPW spiked with various water constituents such as humic acid (HA: CAS number: 1415-93-6), bicarbonate (CAS number: 144-55-8), chloride (CAS number: 7647-14-5), sodium azide (NaN3: CAS number: 26628-22-8), t-butanol (CAS number: 75-65-0), and methanol (CAS number: 67-56-1); all these were purchased from Sigma-Aldrich (St. Louis, MO, USA).
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4

Kinetic Study of MTZ and pCBA Degradation

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Disodium hydrogen phosphate (99.0%), phosphoric acid (85–90%), sodium dihydrogen phosphate (99.0%), metronidazole (99.0%), 4-chlorobenzoic acid (pCBA, 99.0%), t-butanol (99.7%) and fulvic acid (technical) were purchased from Sigma Aldrich. Methanol (chromatographically pure) and acetonitrile (chromatographically pure) were purchased from Merck. Hydrogen peroxide (30% by weight), concentrated sulfuric acid (superior purity), KMnO4 (analytical purity), Na2C2O4 (analytical purity), humic acid (analytical purity) was purchased from Sinopharm Chemical Reagent. Other chemical substances involved in the experiment are all superior pure. Deionized (DI) water is prepared by Molresearc 1020A ultrapure water reactor.
Stock solutions of MTZ and pCBA were prepared in DI water and stored at 4 °C in the dark. For the kinetic studies, the initial concentrations of MTZ and pCBA in the working solutions were 10 μM. Solution pH was adjusted to pH 3.0 with 10 mM phosphate buffer system. The pH value of the reaction system remained constant throughout the experiment. Experimental design and operation process had been introduced in our previous papers [36 (link),37 (link)].
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5

Synthesis of Vanillyl Ferulate Ester

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VFA was prepared in 52% overall yield after three steps starting from FA. The procedure was modified from Mastihubova and Mastihuba (2013 (link)), offering >95% purity after column chromatography on silica gel based on 1H NMR and LC-MS. Methyl ferulate (MFA) was purchased from Alfa Aesar (Karlsruhe, Germany), while FA, prenol (99%), n-hexane (<0.02% water), t-butanol (anhydrous, ≥99.5%), MOPS solution 1 M, and other materials were purchased from Sigma-Aldrich (Saint Louis, USA).
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6

Synthesis and Characterization of Graphene Oxide

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The following chemicals, graphite powder (Sigma–Aldrich, 10 mesh), sulfuric acid (Sigma–Aldrich, ACS reagent, 95.0–98.0%), hydrochloric acid (Sigma–Aldrich, ACS reagent, 37%), potassium permanganate (Fischer Scientific, ≥99%), hydrogen peroxide (Sigma–Aldrich, 30 wt% in H2O), sodium hydroxide (Sigma–Aldrich, ACS reagent, ≥97.0%), zinc acetate dehydrate (Sigma–Aldrich, ACS reagent, ≥98%) and phosphoric acid (Sigma–Aldrich, ACS reagent, ≥85 wt% in H2O). Scavengers p-benzoquinone (BQ), t-Butanol (TBA), ethylenediaminetetraacetic acid disodium salt (EDTA-2Na), and AgNO3 (all Sigma–Aldrich) were used as received. Zinc hydroxyacetate was prepared by procedure presented in our previous article28 (link).
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7

Purification of Organic Compounds

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Benzaldehyde (99.5%), benzyl
alcohol (99.8%), hydrobenzoin (99.0%), copper(II) acetate (99.9%),
palladium(II) acetate (99.9%), acetic acid (99.8%), sodium acetate
(99.0%), 2-propanol (99.5%), acetone (99.9%), diphenyl ether (99.0%),
ethyl acetate (99.5%), t-butanol (99.5%), 2-mercaptobenzothiazole
(97%), and D2O (99.9 atom % D) were purchased from Sigma-Aldrich
and used without further purification. Deionized (DI) water (18.2
MΩ·cm–1) was used to prepare all aqueous
solutions.
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8

Lipid Mediator Characterization Protocol

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Synthetic LXA4 was purchased from EMD Millipore (Billerica, MA) and RvD1 was purchased from Cayman Chemical, Ann Arbor, MI). Both compounds were dissolved in ethanol as supplied by the manufacturer and were stored at −80 °C with minimal exposure to light. Immediately prior to use, each SPM was diluted in with Krebs-Ringer bicarbonate buffer with HEPES (KRB-HEPES, 119 mM NaCl, 4.8 mM KCl, 1.0 mM CaCl2, 1.2 mM MgSO4, 1.2 mM KH2PO4, 25 mM NaHCO3, 10 mM HEPES, and 5.5 mM glucose [pH 7.45]) to the desired concentrations and added to the cells. The LXA4 analogs were prepared as described previously 16 (link), 17 (link). The cells were incubated at 37 °C in the dark. Daily working stock dilutions were discarded following each experiment. Annexin A1 (AnxA1) was purchased from MyBiosource (San Diego, CA). Aristolochic acid, 2-aminoethyl diphenylborinate (2-APB), 1 butanol and t-butanol were from Sigma Aldrich (St Louis, MO) while U0126 was purchased from R&D Systems (Minneapolis, MN). H89 and R0-31317549 were obtained from EMD Millipore (Billerica, MA).
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9

Synthesis of Copper Complexes

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Acetonitrile (ABCR), t-butanol (Sigma-Aldrich), LiTFSI (TCI) and TBP (TCI) were purchased from commercial company and used as received, unless stated otherwise. The [Cu(tmby)2](TFSI) and [Cu(tmby)2](TFSI)2 powders were synthesized as previously described in the literature15 (link). The [Cu(tmby)2](TFSI)2 powders contain chloride anion impurity at p.p.m.
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10

Trace Metal Precipitation Assay

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TMP (99.0%), 4-chlorobenzoic acid (pCBA, 99.0%), sodium dihydrogen phosphate (99.0%), disodium phosphate (99.0%), sodium persulfate (99.0%), fulvic acid (technical), and t-butanol (99.7%) were obtained from Sigma Aldrich. Copper sulfate (guaranteed reagent, GR), cobalt sulfate (GR), zinc sulfate (GR), sodium chloride (GR), sodium sulfate (analytical grade), sulfuric acid (GR), and hydrogen peroxide (30% by weight) were obtained from Sinopharm Chemical Reagent. Deionized (DI) water was obtained from a Molresearc 1010A molecular water system.
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