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Dna engine 7500 continuous fluorescence detection system

Manufactured by Thermo Fisher Scientific
Sourced in United States

The DNA Engine 7500 Continuous Fluorescence Detection System is a laboratory instrument designed for real-time quantitative PCR (qPCR) analysis. It provides continuous fluorescence detection capabilities to monitor and analyze DNA amplification during the PCR process.

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3 protocols using dna engine 7500 continuous fluorescence detection system

1

Quantitative Analysis of APPV Expression

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Total RNA was extracted from tissues using a Universal RNA Extraction Kit (Takara Biotech, Dalian, China), and reverse transcription was performed to generate cDNAs using a PrimeScript RT Reagent Kit (Takara Biotech, Dalian, China) according to the manufacturer’s instructions. Relative expression levels of APPV in tissues were determined by real-time quantitative PCR using a DNA Engine 7500 Continuous Fluorescence Detection System (Applied Biosystems, CA, USA) and a SYBR Premix Ex Taq Kit (Takara Biotech, Dalian, China). The specific qPCR primers used were E2-F (GCAGCCGATAAGACAGAG), E2-R (GATAGCCATACACCTTCCCT), β-actin-F (GGTGGGAATGGGTCAGAAGGA), and β-actin-R (TGGCTGGGGTGTTGAAGGTC). Relative expression levels of APPV in tissues were calculated by normalizing the levels of gene transcripts to that of β-actin using a relative standard curve method with the 2−ΔΔCt formula. Statistical analysis was performed using SPSS version 20.0, and the figures were made using GraphPad Prism (GraphPad Software, La Jolla, CA). One-way analysis of variance and Student’s t-test were used to determine the statistical significance of differences in the relative expression levels of APPV in different tissues. Differences were considered statistically significant at P < 0.05.
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2

Quantifying Cytokine Expression in Cell Lines

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Total RNA was extracted, treated, quality determined, stored and reverse-transcribed to cDNA as described in our previous reports [34, 35] . Relative expression levels of IL-1β, IL-6 and TNF-α were determined by real-time PCR using DNA Engine 7500 Continuous Fluorescence Detection System (Applied Biosystems, CA, USA) and SYBR® Premix Ex Taq TM Kit (Takara Biotech, Dalian, China). Primers used for qRT-PCR were designed by Oligo 7 software (Molecular Biology Insights Inc., Cascade, CO, USA), and the sequences for DF-1 cells are as follows: IL-1β-Fwd: ATGACCAAACTGCTGCGGAGG, IL-1β-Rev: GAAGGACTGTGAGCGGGTGTA; IL-6-Fwd: CAAGAAGTTCACCGTG TGCGAGA, IL-6-Rev: ATTCCAGGTAGGTCTGAAAGGCG; TNF-α-Fwd: CTCAGGA CAGCCTATGCCAACA, TNF-α-Rev: CACCACACGACAGCCAAGTCAA; β-actin-Fwd : TGAACTCCCTGATGGTCAGGTC, β-actin-Rev: ACCACAGGACTCCATACCC AAG; Primers for MDCK cells were as follows: IL-1β-Fwd: GTCGAGCCTCATGCCGT GTTC, IL-1β-Rev: GGCAGGCAGCAGACTCAAAGC; IL-6-Fwd: ATGGCTACTGCT TTCCCTACC, IL-6-Rev: CAGTGCCTCTTTGCTGTCTTC; TNF-α-Fwd: ATGAATCCG CCAGCCTACTACAC, TNFα-Rev: CAATCATCTTGTTGCAGGAAGGA-3; β-actin-Fwd: CGACGGGCAGGTCATCACTA, β-actin-Rev: TTCATGGATGCCGCAGGATT. The expression levels for these genes were normalized to that of β-actin, and relative gene expression levels were calculated using the relative standard curve 2 -ΔΔCt method.
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3

Quantifying Cytokine Expression in Cell Lines

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Total RNA was extracted, treated, quality determined, stored and reverse-transcribed to cDNA as described in our previous reports [34, 35] . Relative expression levels of IL-1β, IL-6 and TNF-α were determined by real-time PCR using DNA Engine 7500 Continuous Fluorescence Detection System (Applied Biosystems, CA, USA) and SYBR® Premix Ex Taq TM Kit (Takara Biotech, Dalian, China). Primers used for qRT-PCR were designed by Oligo 7 software (Molecular Biology Insights Inc., Cascade, CO, USA), and the sequences for DF-1 cells are as follows: IL-1β-Fwd: ATGACCAAACTGCTGCGGAGG, IL-1β-Rev: GAAGGACTGTGAGCGGGTGTA; IL-6-Fwd: CAAGAAGTTCACCGTG TGCGAGA, IL-6-Rev: ATTCCAGGTAGGTCTGAAAGGCG; TNF-α-Fwd: CTCAGGA CAGCCTATGCCAACA, TNF-α-Rev: CACCACACGACAGCCAAGTCAA; β-actin-Fwd : TGAACTCCCTGATGGTCAGGTC, β-actin-Rev: ACCACAGGACTCCATACCC AAG; Primers for MDCK cells were as follows: IL-1β-Fwd: GTCGAGCCTCATGCCGT GTTC, IL-1β-Rev: GGCAGGCAGCAGACTCAAAGC; IL-6-Fwd: ATGGCTACTGCT TTCCCTACC, IL-6-Rev: CAGTGCCTCTTTGCTGTCTTC; TNF-α-Fwd: ATGAATCCG CCAGCCTACTACAC, TNFα-Rev: CAATCATCTTGTTGCAGGAAGGA-3; β-actin-Fwd: CGACGGGCAGGTCATCACTA, β-actin-Rev: TTCATGGATGCCGCAGGATT. The expression levels for these genes were normalized to that of β-actin, and relative gene expression levels were calculated using the relative standard curve 2 -ΔΔCt method.
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