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9 protocols using anti hsp70

1

Immunofluorescence Staining of Neural Markers

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Control and treated cells were given a washing with chilled 1X PBS followed by fixation with acetone and methanol (1:1) and permeabilization with 0.3% Triton- X100 in 1X PBS. Cells were then blocked with 2% BSA and incubated with primary mouse monoclonal antibody anti-α-Tubulin (1:500), anti-NF-κB (1:500), anti-MAP-2 (1:250), anti-NF200 (1:500), anti-GAP 43 (1:250), anti-HSP70 (1:500), anti-Mortalin (1:500), anti-Bcl-xL (1:200), anti-Cyclin D1(1:250), anti-NCAM (1:250), rabbit monoclonal anti-AP-1(1:250) (all from Sigma-Aldrich) and mouse monoclonal anti-PCNA (1:250), mouse polyclonal anti-PSA-NCAM (1:250) (from Millipore, MA, USA) for 24 h in humid chamber at 4 °C. No permeabilization was carried out for PSA-NCAM immunostaining. After primary antibody incubation, three washings were given with 0.1% PBST and incubated with secondary antibody (goat anti-mouse/ rabbit IgG/ IgM Alexa Fluor 488/543) for 2 h at RT. Cells were stained with nuclear staining dye DAPI (Sigma-Aldrich) for 15 min, washed with 0.1% PBST and mounted with antifading agent Fluoromount (Sigma-Aldrich). Images were captured with Nikon AIR Confocal Laser Scanning Microscope and analyzed with NIS elements analysis software version 4.11.00 (Nikon Co., Tokyo, Japan). Each experiment was carried out in triplicate.
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2

Western Blot Analysis of Nuclear and Cytoplasmic Proteins

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5×106 cells were treated with NE-PER Nuclear and Cytoplasmic Extraction Reagents (Pierce), used according to manifacturer’s protocol. For Western Blot analysis, samples were resuspended in lysis buffer (50 mM Tris-HCl, pH 7.4; 1% NP-40; 0.25% sodium deoxycholate; 150 mM NaCl; 1 mM EDTA; 1 mM phenylmethylsulfonyl fluoride; 1 mM Na3VO4; 1 mM NaF) and 30 μg of total proteins were loaded on 10% SDS-polyacrylamide gels. Nitrocellulose membranes were incubated with the specific primary antibody (dilutions and buffers were as indicated by manufacturer) anti-PKCε (Merck Millipore, Darmstadt, Germany 06-991), anti-HSP70 (Sigma-Aldrich, St. Louis, MO, H5147), anti- α-tubulin (Sigma-Aldrich, St. Louis, MO), anti-insulin receptor β chain (IRβ, (Cell Signaling, Danvers, MA, #3025), anti-Myogenin (Santa Cruz, Dallas, TE sc-12732), anti-myoD (Santa Cruz sc-32758), anti GAPDH (Merk Millipore MAB374) anti-HMGA1 (Abcam, Cambridge, UK ab4078), then washed and incubated with 1:5000 peroxidase-conjugated anti-rabbit or with 1:2000 peroxidase conjugated anti-mouse IgG (Pierce). Signals were revealed by ECL Supersignal West Pico Chemiluminescent Substrate detection system (Pierce).
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3

Western Blot Analysis of α-Syn-EGFP in SH-SY5Y Cells

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After treatment, α-Syn-EGFP expressing SH-SY5Y cells were harvested in RIPA buffer (Cell Signaling Technology) supplemented with protease inhibitor cocktail (Roche). Lysates were clarified by centrifugation at 20 000g at 4 °C. Protein concentration in the clear supernatant was determined using the Pierce® BCA protein assay kit (Thermo Scientific) following the manufacturer's instructions and protein samples were loaded on gradient 4–20% tris-MOPS-SDS gels (GenScript). Proteins were then transferred to PVDF membranes (Bio-Rad), through a semi-dry Trans-Blot® Turbo™ transfer system (Bio-Rad). PVDF membranes were subsequently blocked in tris-buffered saline plus 0.1% Tween (TBS-T) and 5% no-fat dry milk for 1 hour at room temperature and then incubated overnight at 4 °C with primary antibodies. The following primary antibodies were used: anti-HSP90 (05-594, Sigma-Aldrich), anti-HSP70 (SAB4200714, Sigma-Aldrich), anti-αSyn MJFR1 (ab138501, Abcam), and anti-β-Actin (A1978, Sigma-Aldrich). After incubation with HRP-conjugated secondary antibodies (Sigma-Aldrich) at room temperature for 1 hour, immunoreactive proteins were visualized using an Immobilon® Forte Western HRP substrate (Millipore) on an Imager CHEMI Premium detector (VWR). The densiometric analysis of the detected bands was performed by using the Fiji software.
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4

Western Blot Protein Analysis Protocol

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Cells were transfected with Lipofectamine 2000 (Invitrogen), according to the manufacturer's instructions. Briefly, cells were plated at 20%–30% density in 12‐well plates 24 h prior to transfection. For siRNA transfection, the equivalent of 200 nM of siRNA per well of a 12‐well plate was utilized. After a 48 h incubation period, the lysates of the cells were measured using the Bradford assay. Equal amounts of protein were separated by SDS‐PAGE and transferred to a polyvinylidene fluoride (PVDF) membrane. The membranes were immunoblotted with the following specific antibodies: anti‐HSP70, anti‐rabbit IgG‐HRP (Sigma‐Aldrich), anti‐rat IgG‐HRP (Sigma‐Aldrich), and anti‐GAPDH (Sigma‐Aldrich), using standard protocols. The blots were developed with West Dura chemiluminescent substrates using a Bio‐Rad ChemiDoc imaging system.
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5

Western Blot Analysis of Muscle Proteins

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PKC epsilon, SOD2, Nrf-2, and Myogenin protein content was tested with a Western blot. In brief, C2C12 was lysed with a RIPA buffer and total protein was quantified with a BCA protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA), according to the instruction protocol. Forty micrograms of proteins were separated on 10% SDS-polyacrylamide gel electrophoresis, transferred to a nitrocellulose membrane, and incubated with a specific primary antibody diluted in the blotting solution as recommended by the manufacturer protocol. We used anti-PKCe (Merck Millipore, Darmstadt, Germany, Cat. No.: 06-991), anti-SOD2 (Enzo Life Sciences Inc., Farmingdale, NY, USA, Cat. No.: ADI-SOD-111F), anti-Myogenin (Santa Cruz, Dallas, TE, USA, Cat. No.: sc-12732), anti-Nrf2 (clone: D179C, Cell Signaling, Danvers, MA, USA, Cat. No.: 12721), and anti-HSP70 (Sigma-Aldrich, St. Louis, MO, USA, Cat. No.: H5147) as a loading control. The nitrocellulose membranes were then washed and incubated with 1:5000 peroxidase-conjugated anti-rabbit (Thermo Fisher Scientific, Waltham, MA, USA) or 1:2000 peroxidase-conjugated anti-mouse IgG (Sigma-Aldrich, St. Louis, MO, USA). Proteins were resolved with an ECL SuperSignal West Pico Chemiluminescent Substrate Detection System (Thermo Fisher Scientific, Waltham, MA, USA) and densitometric analyses were performed using ImageJ software (by NIH).
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6

Fly Head Protein Extraction and Western Blot

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Western blot assays with fly heads were performed as previously described (Garbe et al., 2013 (link)). Briefly, 7–10 fly heads per genotype/condition were lysed in 1x Passive Lysis Buffer (Promega), supplemented with protease and phosphatase inhibitors. For S2 cell extracts, 48 hr after transfection, cells were collected and lysed in the same buffer as described for fly heads. The following primary antibodies were used: anti-PER (UP1140, 1:1000), anti-TIM (UPR42, 1:1000) and anti-HSP70 (Sigma, 1:5000).
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7

Immunofluorescence Assay for Microglial Cells

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Both primary and BV-2 microglial cells, control and treated, were washed with 1× phosphate-buffered saline (PBS) thrice and were fixed with acetone to methanol followed by permeabilization with 0.3 % Triton X-100 in PBS (PBST). Cells were then incubated with anti-α-tubulin (1:500) or anti-NF-kB (1:300) or anti-AP1 (1:300) or anti-HSP-70 (1:300) (from Sigma-Aldrich) diluted in 2 % BSA, for 24 h at 4 °C in humid chamber. After two to three washings with 0.1 % PBST, the cells were incubated with the secondary antibody anti-mouse IgG 488 and anti-rabbit IgG 488 (prepared in 2 % BSA (1:500)) for 2 h at room temperature. Cells were incubated with (DAPI, 1:5000 in 1× PBS) for 10 min for nuclear staining and then mounted with anti-fading reagent (Fluoromount, Sigma). For CellRox and Mitotracker staining, after treatment period, the dye was added in culture according to the manufacturer’s instructions; cells were then fixed and mounted. Images were captured using Nikon AIR Confocal Laser Microscope and analyzed using NIS elements AR analysis software version 4.11.00. Experiment was performed in triplicate.
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8

Western Blot Analysis of Bvra Protein

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Liver, spleen, and total brain were harvested at indicated time points, immediately frozen in liquid nitrogen, and stored at −80 °C. Tissues were lysed using 1× RIPA buffer (9806, Cell Signaling) supplemented with proteases (Complete Mini protease inhibitor, Roche, Almere, The Netherlands) and phosphatase inhibitors (PhosSTOP, Roche, Almere, The Netherlands). Protein concentration was determined by the Bradford method and 30 µg total protein extract was loaded, separated by 10% SDS Page gel, blotted onto nitrocellulose membrane that was blocked with 5% milk in PBST for 2 h to prevent a-specific binding. Bvra was detected using the anti-Bvra primary antibody (1:1000, ADI-OSA-450, Enzo, Pero, MI, Italy) incubated overnight in 5% BSA, PBST. Anti-actin (Sigma-Aldrich, Milano, Italy) antibody or Anti-HSP70 (ADI-SPA-185D) were used as loading controls.
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9

Protein Extraction and Identification

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AX-B was prepared as previously described (23) , Amoxicillin (Clamoxyl) was from GlaxoSmithKline. Enhanced chemical luminescent reagent (ECL) and Horseradish Peroxidase (HRP)-Streptavidin were from GE Healthcare. Sypro-Ruby and Ampholytes were from BioRad. Acetone was from Merck. Neutravidin beads were from Thermo Fisher. Iodoacetamide, protein G-agarose, 4′,6-diamidino-2-phenylindole dihydrochloride (DAPI), N-hexanoyl-D-sphingosine (C6 ceramide), Nhexanoyldihydrosphingosine (dihydroceramide C6), GW4869, penicilin G,streptavidin-Gold particles of 10 nm Ø, anti-HSP70 and anti-β-Actin were from Sigma. Fluorescein-5-isothiocyanate (FITC), Alexa-488 streptavidin, Texas Red-streptavidin (TXR-Streptavidin) and anti-rabbit-Alexa 647 were from Molecular Probes. Antibodies against α-enolase (sc-100812), RhoGDI (sc-360) and ICAM-1 (sc-7891) were from Santa Cruz Biotechnology and anti-penicillin from AbDSerotec.
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