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9 protocols using goat anti rabbit igg

1

SARS-CoV-2 Nucleocapsid Protein ELISA

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The native recombinant nucleocapsid proteins (NPs) of SARS-CoV, SARS-CoV-2 or variants, MERS-CoV, HKU1, OC43, NL63, and 229E (Sino Biological) (2 μg/mL) or denatured by treatment with the denaturing buffer containing 0.5% SDS and 40 mM DTT [18 (link)] (New England Biolabs) at 95 °C for 10 min were coated into 96-well half-area plates overnight at 4 °C. The plates were then blocked with blocking buffer (PBS containing 4% skim milk) at 37 °C for 1 h. Five-fold or three-fold serial-diluted NP-specific mAbs or Rabbit pAb against NP of SARS-CoV-2 (Sino Biological) were added to the plates in duplicate and incubated for 1 h at 37 °C. And then HRP-conjugated Goat anti-Human IgG (ZSGB-BIO) or Goat anti-Rabbit IgG (TransGen Biotech) secondary antibody was added to the plates and incubated at 37 °C for 1 h. For competitive ELISA, after blocking, serially diluted P301-F7, P301-H5, and human IgG1 were mixed with HRP-conjugated P301-F7, and then added to the plates and incubated at 37 °C for 1 h. The enzymatic reaction was developed with TMB substrate (BD Biosciences) and stopped by 2 M H2SO4. The optical density was measured at 450 nm (OD. 450 nm) with a Varioskan™ LUX Multimode Microplate Reader (Thermo Scientific).
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2

16/8/10mer Peptide Expression Analysis

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The cell pellets obtained from 2 mL culture of expressed 16/8/10mer peptide were boiled at 95°C in 200 μL of 1×SDS-PAGE loading buffer for 10 min, and the proteins were resolved by 15% SDS-PAGE under reducing conditions. Gels were either stained with Coomassie brilliant blue G-250 for analyzing the bands corresponding to the target 16/8/10mer peptide, or used for Western blot by electro transferring the proteins onto a 0.2 μm nitrocellulose (NC) membrane [30 (link)]. Regarding the specific antigen-antibody reaction, the NC membrane was blocked with 5% (w/v) skimmed milk powder in Tris-buffered saline-Tween 20 (TBS-T), treated with rabbit pAb α-SGn (1:1000 dilution) or sheep serum (1: 100 dilution) as the primary antibody, and then reacted with goat anti-rabbit IgG or mouse anti-goat IgG conjugated to HRP (1:5000 dilution, Trans-Gen Biotech) as the secondary antibody. Finally, the blot was performed using the ECL plus Western blot detection reagent according to the manufacturer’s instructions, and it was then imaged by GE-Image Quant LAS 4000 (GE Healthcare, Buckinghamshire, UK).
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3

Quantifying Protein Expression in Colorectal Cancer

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We further verified the expression levels of SLC35A3 and CD4 proteins in tumor tissues and adjacent normal tissues of colorectal cancer patients through IHC. After deparaffinization, rehydration, and antigen retrieval by heating from the slides in sodium citrate buffer (pH 6.0), the antigens were retrieved. To inhibit endogenous peroxidase activity, they were blocked in 3% hydrogen peroxide for half an hour and then washed three times with PBS. Incubation with rabbit anti-SLC35A3 (SinoBiological, China) and rabbit anti-CD4 (Bioss, China) was performed overnight at 4 °C, followed by incubation with goat anti-rabbit IgG (TransGen Biotech, China) for 2 h at room temperature. After staining with 3,3′-diaminobenzidine (DAB), the sections were counterstained with hematoxylin, dehydrated, fixed, and sealed with a cover slip. The immunohistochemical results were analyzed in Image-Pro Plus 6.0, using the same brownish-yellow as the uniform standard for judging whether the image was positive. The cumulative optical density (IOD) and pixel area (area) of the tissue in each positive standard photo were analyzed, and the mean density was calculated as Mean density = IOD/area. The higher the Mean density value, the higher the expression level of the positive protein.
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4

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

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The Total Protein Extraction Kit (Transgen, DE101-01) containing protease inhibitors was used to separate the total proteins of the NPC cells. Then, 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis was used to separate an equal amount of cell protein, which was then transferred to a polyvinylidene fluoride membrane (EMD Millipore). The membrane was then blocked with 5% skimmed milk and incubated with the primary antibody at 4 °C overnight. After washing 3 times with Tris-buffered saline with Tween 20 (TBST buffer; Solarbio, T1081), the membrane was incubated with the secondary antibody for 2 h at 37 °C. Next, the samples were washed 3 times with TBST buffer (Solarbio, T1081), and the chemiluminescence gel imaging system (Bio-Rad, USA) was used to view protein bands. The antibodies used were as follows: GAPDH (Transgen, HC301-01), E-cadherin (Abcam, ab40772), N-cadherin (Abcam, ab18203), vimentin (Abcam, ab92547), CRIPTO (Abcam, ab108391), JAK2 (Abcam, ab108596), STAT3 (Abcam, ab68153), p-JAK2 (Abcam, ab32101), p-STAT3 (Abcam, ab76315), GRP78 (Abcam, ab21685), goat anti-mouse IgG (Transgen, HS201-01), and goat anti-rabbit IgG (Transgen, HS101-01).
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5

TALE Protein Detection in Xoo Strains

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To detect the TALE proteins in Xoo strains, Western blotting was conducted as described previously [33] (link). The tested Xoo strains were cultured in NB to the logarithmic phase and harvested by centrifugation. Bacterial cells were washed twice, and adjusted to OD600 = 2.0 with sterile distilled water. Proteins added loading buffer were boiled, separated on an SDS-PAGE gel and transferred to a polyvinylidene difluoride membrane for immunoblotting with anti-FLAG (TransGen, China) as the primary antibody. Then the goat anti-rabbit IgG (TransGen, China) was used to detect the primary antibodies. The blotting was visualized with the EasySee Western Kit supplied by TransGen (China).
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6

Western Blot Analysis of Cellular Proteins

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After the total proteins of cells in each group were isolated with total protein extraction kit (Transgen, DE101-01), protein samples were treated with SDS-PAGE protein loading buffer (Beyotime, P0015). Then the cell proteins were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis, which were transferred to a polyvinylidene fluoride membrane (Millipore), washed with TBST buffer (Solarbio, T1081). The membrane was sealed with 5% skim milk for 1h, and incubated with primary antibody at 4 °C overnight, and the second antibody incubated at 37 °C for 1h. Then, the samples were washed 3 times with TBST buffer (Solarbio, T1081), and ECL luminescence solution (Biosharp, BL520A) was added. The protein bands were observed using a chemiluminescence gel imaging system (Bio-RAD, USA). The used antibodies are as follows: GAPDH (Transgen, HC301-01), HSPA5 (Proteintect, 11587-1-AP), LC3B (Abcam, ab192890), P62 (BOSTER, M00300-1), Phospho-mTOR (Ser2448) (D9C2) (Cell Signaling Technology, 5536T), mTOR (7C10) (Cell Signaling Technology, 2983T), Phospho-Akt (Ser473) (D9E) (Cell Signaling Technology, 4060S), Akt (pan) (C67E7) (Cell Signaling Technology, 4691S), Exosome Panel (Calnexin, CD9, CD63, CD81, Hsp70, TSG101) (ab275018), Goat Anti-mouse IgG (Transgen, HS201-01), Goat anti-rabbit IgG (Transgen, HS101-01).
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7

Western Blot Analysis of Protein Expression

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Cells and tissues were collected and lysed with RIPA buffer containing proteinase inhibitor. The protein concentration was measured with BCA Protein Quantification Kit (Solarbio, China). Proteins were separated on SDS-PAGE and electro-transferred to nitrocellulose membranes (Millipore). After blockage, the membranes were incubated at 4 °C overnight with primary antibodies including IGF2BP3 (1:2000 dilution, Cat No.14642-1-AP, ProteinTech), c-MYC (1:5000 dilution, Cat No. 67447-1-Ig, ProteinTech), CD44 (1:2000 dilution, Cat No. 60224-1-Ig, ProteinTech), Cyclin D1 (1:5000 dilution, Cat No. 60186-1-Ig, ProteinTech), CDK13 (1:1000 dilution, Cat No. A10258, ABclonal), GAPDH (1:100,000 dilution, Cat No. 60004-1-Ig, ProteinTech), β-actin (1:1000 dilution, Cat No. ab8227, Abcam). Peroxidase-conjugated (HRP)-linked secondary antibody (Goat Anti-Rabbit IgG, 1:10,000 dilution, Cat No. HS101-01, Goat Anti-Mouse IgG, 1:10,000 dilution, Cat No. HS201-01, Transgen, China) was used to incubate with these membranes for 1 h at room temperature. The antigen–antibody reaction was visualized via an ECL kit (Thermo Fisher Scientific, USA) and imaged by UVITEC Alliance micro Q9 system (UVITEC, Britain).
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8

Molecular Mechanisms of EGFR Signaling

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Reagents were from the following suppliers: LPA (SIGMA), DMSO (SIGMA), BB94 (SIGMA), DAPI (invitrogen), Ki16425 (SELLECK), AG1478 (SELLECK), LY294002 (SELLECK), Protein G beads (SIGMA), Endo-free Plasmid Mini Kit(OMEGA), Lipofectamine 2000 Reagent (invitrogen), Rapamycin (SELLECK), BSA (SIGMA), OPTI-MEM (Gibco); geminin Rabbit Polyclonal antibody (Proteintech), EGFR-speci c Rabbit Polyclonal antibody (Proteintech), Rabbit anti-DUC3 Polyclonal Antibody (Absin), Mouse Anti-β-Tubulin Monoclonal Antibody (Transgen), Anti-phosphotyrosine antibody (abcam), Alexa Fluor 488 Goat anti-Rabbit IgG (H+L) (invitrogen), Goat anti-Rabbit IgG (Transgen), Goat anti-Mouse IgG (Transgen).
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9

Western Blot Protein Detection

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Protein lysates were quantified and separated on a sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gel. After the separation, proteins were transferred onto a polyvinylidene difluoride (PVDF) membrane (Bio-Rad Laboratories, Inc.), and immunoblotted with a primary antibody, followed by an incubation with a secondary antibody. The luminescence was visualized on the Tanon-5200 Chemiluminescent Imaging System (Tanon Science & Technology Co., Ltd.). The following antibodies were used: AZIN1 (1:1000, ab57169; Abcam), β-tubulin (1:5000, AP0064; Bioworld), goat anti-mouse IgG (1:5000, HS201; TransGen Biotech), and goat anti-rabbit IgG (1:5000, HS101; TransGen Biotech).
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