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51 protocols using freeze dryer

1

Extraction of Pinus Needle Bioactive Compounds

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Fresh P. densiflora and P. koraiensis needles were rinsed with distilled water. After removing moisture, the needles were dried in a heat dry machine (KED-066A, C&T Co., Gwangju, Korea) at 30 °C for seven days or 90 °C for three days without light. Then, dried samples were coarsely ground using a commercial grinder and passed through a 100-mesh sieve. Subsequently, the resulting powder (10 g) from each sample was dissolved in 200 mL of 80% aqueous methanol (v/v) and agitated using a shaker (Daewonsci Inc., Bucheon, Korea) at 20 °C for 24 h. Next, the solution was filtered through qualitative filter papers (Whatman No. 2, Maidstone, UK). Finally, the solvent was removed using a vacuum rotary evaporator (Eyela, Tokyo, Japan). To remove residual solvent, the extracts were dried using a freeze dryer (IlShinBioBase Inc., Dongducheon, Korea) and maintained at 15 °C until use for non-volatile assay.
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2

Anti-TB Drug Lyophilization and Validation

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All drugs were purchased from Sigma-Aldrich (St. Louis, MO, USA) including the first line drugs (isoniazid (INH), rifampin (RIF), streptomycin (STR), ethambutol (EMB), and rifabutin (RFB)) and the second-line drugs (amikacin (AMI), capreomycin (CAP), kanamycin (KAN), levofloxacin (LEV), moxifloxacin (MOXI), ofloxacin (OFL), and para-aminosalicylic acid (PAS)). Stock solutions of each antibiotic were prepared in accordance with the manufacturer’s instructions and working solutions were prepared fresh from the stock solution. For drug lyophilization, all drugs in the DAC chip were freeze-dried under a vacuum, and the freezing process was carried out using a freeze dryer (Ilshin Biobase Co., LTD., Korea). After freeze-drying, the DAC chip was packaged in an aluminum foil vacuum-sealed pouch and stored at 4 °C before use. The 12 lyophilized anti-TB drugs in the DAC chip were validated by MIC determination using the clinical isolate KIT87190 strain. Quality control ranges of MIC value for each drug were determined from three different batches twice a week for 5 weeks, resulting in 30 replicates in total (Supplementary Table S2)23 .
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3

Investigating Sweet Basil Growth and Compounds

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Twenty plants located in the middle of each treatment were harvested at 3 weeks after transplanting and investigated for their growth characteristics, which included total fresh weight (FW), shoot FW, root FW, plant height, and the number of leaves per individual. To analyze the polyphenols and essential oil per LED treatment, the sweet basil leaves at 3 weeks after transplanting were lyophilized using a freeze-dryer (Ilshin Bio Base Co., Ltd., Dongducheon, Korea) for 48 h. Data were assessed using analysis of variance (ANOVA) with SAS 9.2 software (SAS Institute Inc., Cary, NC, USA), and means were compared by Duncan's multiple range test with a significance level of 5%. Graphs were generated with SigmaPlot 10.0 (USA).
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4

Functional Fermented Hemerocallis dulcis Extract

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The stem and leaves of H. dulcis were obtained from a certified company (Hambakjae Bio Farm Co., Ltd., Jeju Island, South Korea). The identity of H. dulcis was confirmed by a taxonomist (Dr. ZI-Eum Im) and voucher specimens (Voucher number KU-FST-010) were deposited at the Department of Food Science and Technology, Keimyung University, South Korea. The dried and crushed parts of the stem and leaves of H. dulcis were macerated with water (100 g in 1000 ml of water) for 8 h at 100 °C. A novel functional test product (FHDE) was prepared by co-fermenting 50 ml of the concentrated H. dulcis extract (HDE) with probiotics. Briefly, the extract was mixed with glucose (3%) and monosodium L-glutamic acid (5%), and autoclaved at 121 °C for 15 min. Then, Bacillus subtilis HA (KCCM 10775P) starter culture was inoculated and incubated at 42 °C for 3 days. Then, the product was mixed with skim milk (1%, v/v) and glucose (1.5%, v/v) solution. Lactobacillus plantarum EJ2014 (KCCM 11545P) was inoculated and incubated at 30 °C for 7 days for secondary fermentation. Finally, the fermented product was lyophilized via Freeze Dryer at − 70 °C for 3 days (Freeze Dryer, Ilshin BioBase Ltd., Ede, Netherlands; Pilot LP20).
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5

Extraction and Preparation of IBC

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The IBC extract was prepared according to a previously described method [16 (link)]: 300 g of IBC was heated to 105 °C in 3 L of distilled water for 3 h. After cooling at −20 °C for 30 min, the mixture was filtered once through a filter paper (HA-030, Hyundai Micro, Seoul, Korea) and then lyophilized in a freeze dryer (Ilshin BioBase, Gyeonggi-do, Korea) to obtain IBC dry extract. The extract yield was calculated and then re-dissolved in phosphate-buffered saline (PBS) to the desired concentration. It was stored at −20 °C until use.
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6

Potentilla rugulosa Nakai Leaf Extract

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LPE powder was prepared as follows: Leaves of Potentilla rugulosa Nakai were collected from Yeongwol-gun, Gangwon-do, Republic of Korea, in July 2016 (NIBRGR0000597649) and were identified by Dr. Jong Seok Lee at the National Institute of Biological Resources (Incheon, Korea). Coarse, dried, and grounded samples (100 g) were extracted for 24 h with 1000 mL 70% ethanol for the extraction of both fat-soluble and water-soluble compounds. The extracted material was filtered (Whatman, No. 3, Maidstone, Kent, UK) and concentrated with a rotary evaporator (EYELA, N-3000, Tokyo, Japan). Finally, the extracted material was subsequently dried using a freeze dryer (Ilshin Biobase Co., LTD, Yangju, Korea).
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7

Preparation of Chinese Yam Extracts

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The Chinese yam (D. batatas) was purchased from Taesan-nongjang (Andong, Korea). The Chinese yam tubers were peeled off, and then the flesh and the peel were separated. The peel was washed with water. Then, both the flesh and the peel were cut into slices and dried with a freeze-dryer (Ilshinbiobase, Dongducheon, Korea).
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8

Extraction and Lyophilization of L. fischeri

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Dried L. fischeri was extracted in 70% ethanol at 90°C over 3 h using a Soxhlet extractor (Misung Scientific, Korea). After extraction, the ethanol extract was collected using a rotary evaporator (EYELA, Japan) and lyophilized using a freeze‐dryer (ilShinBioBase, Korea). The lyophilized powder was dissolved in distilled water at each time point in the study.
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9

Lentil Seed Germination and Cultivation

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Lentil cultivars used in this research were LG, FG, and LR, which were purchased from Asia Seed (Seoul, Republic of Korea). Seeds were soaked in tap water for 2 h. After removing seed coats, thirty seeds were placed in a plant culture dish (ø 90 mm × h 40 mm) containing four layers of sterilized gauze with 3 mL of distilled water. The seeds were grown for 6 days under different light conditions in a cultivation room with constant temperature and humidity at 26 ± 2 °C and 70 ± 5%, respectively. At 2, 4, and 6 days after germination (DAGs), ten individuals were collected from each dish for a total of four dishes per treatment. All of the lentil seeds and sprouts, including shoot, root, and cotyledon, were lyophilized at −80 °C in a freeze dryer (IlshinBioBase, Dong-ducheon, Republic of Korea).
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10

Curcumin-PLGA Conjugate Synthesis

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Curcumin was conjugated with Poly (D, L-lactic-co-glycolic acid) (PLGA) via an ester linkage. We prepared conjugate using N, N’-Dicyclohexylcarbodiimide (DCC) and 4-(Di-methylamino) pyridine (DMAP) as activating agents in dichloromethane (DCM). In the resulting suspension, curcumin was added and stirred for 2 h at room temperature. The reaction mixture was lyophilized in freeze dryer (ILSHIN BIOBASE, Korea) and re-crystallized with DCM to obtain curcumin-PLGA conjugate. The resulting conjugate was characterized by Fourier transform infrared spectroscopy (FT-IR) using FT-IR-2000A, ABB Spectrophotometer (ZrCl2). For further confirmation of the conjugation, 1H NMR spectra of PLGA, native curcumin and curcumin-PLGA conjugate were recorded on Bruker, Avance II (500MHz) Bru spectrometer. Chemical shifts were reported as δ (ppm) relative to Tetramethylsilane (TMS) as a standard. Various shifts in the peaks were interpreted for different groups present in the conjugated system.
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