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3 protocols using anti lbpa

1

Comprehensive Antibody Panel for Alzheimer's Research

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Anti-M6PR (cation independent) antibody [2G11] (ab2733; Abcam).
Anti-APP (A8717; Sigma).
Anti-APP 6e10 to detect Aβ, sAPPα (SIG-39320; Covance).
Anti-GAPDH (Sigma).
Anti-tubulin (Sigma).
Anti-cyclophilin B (ACB0825; Atgen).
Anti-sAPPβ Swedish (6A-1; IBL).
Anti-VPS35 (SC-374372; Santa Cruz).
Anti-LAMP-1 (SC-18821; Santa Cruz).
Anti-PLD3 (HPA012800; Sigma).
Anti-transferrin receptor (13-6800; Invitrogen).
Anti-SORL1 (612633; BD Bioscience).
Anti-GFP (Seaman lab).
Anti-LBPA (MABT837; Sigma).
Anti-EEA1 (610456; BD Biosciences).
Anti-GM130 (610822; BD Biosciences).
Anti-TGN46 (Seaman lab).
Anti-MICALL1 (H00085377-B01P, Novus).
Anti-SNAP29 (gift from Andrew Peden, University of Sheffield, UK).
Anti-PACSIN2 (ab37615, Abcam).
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2

Caspase-2 RNAi knockdown in U87MG and IMR90-E1A cells

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U87MG and IMR90-E1A cells were grown in DMEM supplemented with 10% FBS, penicillin (100 U/mL), glutamine (2 mmol/L), and streptomycin (100 µg/mL) at 37°C in 5% CO2 atmosphere. RNA oligos for interference (RNAi) were purchased from Dharmacon: CASP2 RNAi1, AAACAGCUGUUGUUGAGCGAA; Control1 (CASP2 mutated) RNAi, AAACAAUUGUUGUUGAGCGAA; or Qiagen: CASP2 RNAi2 CAUCUUCUGGAGAAGGACATT and a non-targeting siRNA UUCUCCGAACGUGUCACGU, Control2. Cells were transfected 24 hours after plating by adding the Opti-MEM medium containing Lipofectamine 2000 (Invitrogen) plus RNAi oligos. BSA and Filipin (Sigma), anti-LBPA [15] (link), anti-transferrin receptor (Tnf-R) (OKT9), anti-GM-130 (BD biosciences), anti-caspase-2 [16] (link). Secondary anti-mouse and anti-rabbit antibodies were Alexa Fluor 488 and Alexa Fluor 546 conjugated (Invitrogen).
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3

Macrophage Vesicle Trafficking Assay

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Macrophages differentiated from PBMCs on cover slips were treated with RBCEVs and fixed at different timepoints with 10% formalin. The cells were then washed with PBS containing 2% FBS prior to permeabilization with 0.1% Triton X‐100. The cells were then incubated with the appropriate primary antibody against markers for EEA, late endosomes, or lysosomes‐late endosomes (i.e., EEA, LBPA and LAMP1, respectively), followed by incubation with the appropriate secondary antibody (AlexaFluor 488/594/647‐conjugated mouse I) prior to imaging with the Olympus FV3000 confocal microscope (Olympus Corporation). Primary antibodies used for immunofluorescent staining were anti‐LAMP1 antibody (Abcam, Cat #: ab25630 or Cell Signaling Technology, Cat #: 9091S), anti‐EEA antibody (Cell Signalling Technology, Cat #: 2411S), anti‐LBPA (Sigma‐Aldrich, Cat #: MABT837), anti‐SLC48A1 (HRG1) (Thermofisher Scientific, Cat #: PA5‐42191), and anti‐human BAND 3 (Santa Cruz Biotechnology, Cat #: sc‐133190)
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