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Ab245117

Manufactured by Abcam
Sourced in United States

Ab245117 is a laboratory equipment product offered by Abcam. It is a device designed for use in scientific research applications. The core function of this product is to assist in the analysis and measurement of specific biological or chemical samples, but a detailed description cannot be provided while maintaining an unbiased and purely factual approach.

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9 protocols using ab245117

1

Western Blot Analysis of Cell Markers

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Cells were lysed using RIPA buffer, and the total protein concentration was determined using the BCA assay. Total proteins were separated using 10% SDS-PAGE and transferred to polyvinylidene difluoride membranes. The membranes were blocked with 5% skim milk diluted in TBST for 1 h and then incubated with primary antibodies overnight at 4°C. The primary antibodies were anti-CDKN2A (ab185620, abcam), anti-N-cadherin (ab245117, abcam), anti-E-cadherin (ab40772, abcam), anti-vimentin (ab92547, abcam), and anti-β-actin (ab8226, abcam). After washing, the secondary antibody coupled to horseradish peroxide was added, and the membranes were incubated for 2 h at room temperature. Protein bands were detected using an enhanced chemiluminescence kit.
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2

Western Blot Analysis of Key Proteins

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The same amounts of protein extracts (25 μg) were isolated by SDS-PAGE, and electroblotted to PVDF membranes. The membranes were blotted with the primary antibodies including RNASEH2A (1:1000, ab83943, Abcam), SP1 (1:2000, ab227383, Abcam), CDK1 (1:10000, ab133327, Abcam), CDK2 (1:3000, ab235941, Abcam), N-cadherin (1:1000, ab245117, Abcam), Snail2 (1:1000, ab180714, Abcam), Vimentin (1:1000, ab45939, Abcam) and GAPDH (1:5000, ab8245, Abcam), and then with the corresponding secondary antibody. Enhanced chemilum inescence (ECL) was applied to detect chemiluminescence signals.
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3

Protein Isolation and Western Blot Analysis

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The total protein was isolated by the RIPA lysis buffer (Solarbio) according to the instruction procedures, which was quantified by bicinchoninic acid (BCA) detection kit (Shanghai UCHEM Inc., China). Next, the proteins with suitable concentration were separated by SDS-PAGE gels and then transferred to PVDF membranes (Zhejiang Lianshuo Biotechnology Co., Ltd., China). After blocking with 5% blocking solution, the membranes were incubated with anti-E-cadherin (EP700Y, 1 : 10000, Abcam), anti-N-cadherin (ab245117, 1 : 1000, Abcam), anti-Vimentin (ab20346, 1 : 75, Abcam), and anti-TTYH3 (ab80061, 1 : 1000, Abcam) overnight at 4°C, followed by secondary antibodies for 50 min. Finally, protein expression was detected by ECL chemiluminescence and then analyzed via Gel image processing system.
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4

Protein Expression Analysis in AGS Cells

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Total protein was extracted from AGS cells using RIPA lysis buffer and quantified by a Pierce BCA Protein assay kit (Thermo Fisher Scientific). After denaturing, proteins were separated via 12% SDS-PAGE and the separated proteins were subsequently transferred onto PVDF membranes, which were blocked with 5% fat-free milk for 2 h at room temperature. After washed, membranes were incubated with primary antibodies at 4°C overnight and subsequently incubated with an IgG-HRP-conjugated goat anti-rabbit secondary antibody for 1 h at room temperature. Protein bands were visualized using ECL reagent (Millipore). Densitometric analysis were performed using Image J v1.46 software. Information about antibodies are as follows: E-cadherin (ab40772; 1:10,000), N-cadherin (ab245117; 1:1,000), Vimentin (ab92547; 1,000), snail family transcriptional repressor 1 (Snail; ab216347; 1,000), ST8SIA1 (ab253021; 1:300), SPI1 (ab227835; 1:1,000), secondary antibody (ab6721; 1:5,000; all Abcam).
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5

Protein Expression Analysis via Western Blot

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Protein concentration in each tube was evaluated via the bicinchoninic acid (BCA) method. Protein samples (30 μg) were separated using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then blotted onto polyvinylidene difluoride (PVDF) membrane (Millipore, Billerica, MA, USA). Blocking was applied through mixing the membrane with 5% skimmed milk. Membrane was labeled with primary antibodies (Abcam, Cambridge, MA, USA), including anti-E-Cadherin (ab40772), anti-vimentin (ab92547), anti-N-Cadherin (ab245117), amti-TRIM27 (ab78393) and anti-GAPDH (ab8245). Subsequently, horseradish peroxidase (HRP)-labeled secondary antibody (Abcam) was mixed with the membrane for 2 h. Protein bands were appeared and quantified with the enhanced chemiluminescence chromogenic substrate (Beyotime, Shanghai, China) and ImageJ software (Bio-Rad), respectively.
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6

Western Blot Analysis of Notch Signaling

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The total protein from each group was diluted to the same concentration. Proteins were denatured, electrophoresed, and then transferred to polyvinylidene fluoride membranes (1620177; Bio-Rad, Hercules, CA, USA). Blots were blocked with 5% BSA and washed. The membrane was then incubated with the following antibodies overnight. The antibodies were anti-YAP1 (1:1000, ab205270; Abcam), anti-neurogenic locus notch homolog protein 1 (Notch 1) (1:1000, ab52627; Abcam), anti-jagged canonical notch ligand 1 (Jagged 1) (1:1000, ab7771, Abcam), anti-GAPDH (1:10000, AF7021; Affinity, Shanghai, China), anti-Ki67 (1:1000, ab16667, Abcam), anti-PCNA (1:2000, ab92552; Abcam, UK), anti-Bcl-2-associated X protein (Bax) (1:5000, ab32503; Abcam), anti-Bcl-2 (1:5000, ab32124, Abcam), anti-N-cadherin (1:5000, ab245117; Abcam), anti-Vimentin (1:1000; Abcam), and anti-E-cadherin (1:2000, ab40772; Abcam) antibodies. After washing, the membranes were incubated with anti-rabbit (7074, CST, USA) or anti-mouse (7076, CST) IgG HRP-linked antibodies. Proteins were visualized using a chemiluminescence imaging analysis system (610020-9Q; Qinxiang, China) and ImageJ software (NIH, Bethesda, MD, USA).
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7

Protein Expression Analysis in Bone Cancer Cells

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Proteins were extracted from MG63 or Saos-2 cells using lysis buffer (Solarbio), and the process of transferring and incubating were performed on the basis of the manufacturer’s protocols. Protein concentration was quantified using a BCA kit (Takara Bio, Inc.). The proteins were separated via SDS-PAGE on 8% gel and then electroblotted onto a PVDF membrane. Following blocking with 5% blocking reagent at room temperature for 1 h, the membranes were incubated with the primary antibodies in 5% BSA overnight at 4°C. Subsequently, the membranes were incubated with secondary antibodies at room temperature for 1 h. Proteins were visualized using ECL reagent. The primary antibodies use were the following: anti-BYSL (1:1,000, NBP1-89501; Novus Biologicals), anti-Bcl-2 (1:1,000, ab196495; Abcam, Cambridge, United Kingdom), anti-Histone H3 (1:1,000, ab18521; Abcam), anti-Bax (1:2000, ab32503; Abcam), anti-E-cadherin (1:5,000, 20874-1-AP; Proteintech, Rosemont, IL, United States), anti-N-cadherin (1:1,000, ab245117; Abcam), anti-Nrf2 (1:1,000, ab137550; Abcam), anti-β-actin (1:1,000, AC026, Abclonal), and ani-vimentin (1:2,000, 10366-1-AP; Proteintech).
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8

Quantitative Protein Analysis Workflow

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Lysed in RIPA buffer, CC cells were subjected to protein quantification via a bicinchoninic acid assay. The sodium dodecyl sulfate-polyacrylamide gel electrophoresis was applied for the separation of proteins, followed by transferring to polyvinylidene difluoride membranes. After blocking, the membrane was incubated with primary antibodies. Further, the horseradish peroxidase-conjugated secondary antibodies (Abcam, Cambridge, UK) were supplemented. The enhanced chemiluminescence system (Thermo Fisher Scientific) was employed for evaluating the protein bands, and the proteins were quantified via Image J software (National Institutes of Health, Bethesda, MD, USA). The primary antibodies used in this study included anti-FLOT2 (1:3000, ab96507, Abcam), Vimentin (1:1000, ab16700, Abcam), N-cadherin (1/1000, ab245117, Abcam), E-cadherin (1 µg/ml, ab231303, Abcam), MEK (1:10000, ab32576, Abcam), p-MEK (1 µg/ml, ab278716, Abcam), ERK1/2 (1/10000, ab184699 Abcam), and p-ERK1/2 (0.2 ng/ml, ab176660, Abcam).
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9

Protein Expression Analysis Protocol

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RIPA lysis buffer (PC101, EpiZyme, Shanghai, China) contains protease inhibitors and protease phosphorylation inhibitors to extract total cell lysates. Supernatants were collected after centrifugation. Total protein was detected by BCA protein quantification. Protein samples (20 μg) were separated by 10% SDS-PAGE protein electrophoresis (120 V for 60 min) and then transferred onto the membrane. The membrane was blocked with 5% nonfat milk at 25°C for 2 h, Then, primary antibodies against NSUN6 (Abcam, ab307430, 1:1,000), NM23-H1 (Abcam, ab92327, 1:1,000), E-cadherin (Abcam, ab76055, 1:1,000), N-cadherin (Abcam, ab245117, 1:1,000), vimentin (Abcam, ab92547, 1:1,000), and GAPDH (Abcam, ab245355, 1:5,000) were added, and membranes were incubated overnight. The secondary antibody was then added, and cells were incubated at 25°C for 2 h. Protein expression was detected using chemiluminescence ECL reagent visualization. Image ProPlus software was utilized to quantify the relative expression of target proteins, GAPDH as an internal control.
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