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2 protocols using sc 100 468

1

Western Blot Analysis of Soleus Muscle

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Soleus muscle samples were extracted using radioimmunoprecipitation assay buffer (Tris-HCl, pH 8.0, 150 mM sodium chloride, 1.0% Igepal CA-630 (NP-40), 0.5% sodium deoxycholate, 0.1% sodium dodecyl sulfate, protease inhibitor cocktail, and phosphatase inhibitor cocktail). The proteins were resolved by 10 or 12% SDS-polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride membranes. The membranes were blocked overnight with 5% skim milk in PBST (8 g NaCl, 0.2 g KCl, 1.44 g Na2HPO4, 0.24 g KH2PO4, pH 7.4, 1% Tween-20) and then incubated for more than 2 h with primary antibody (PKA; sc-98,951, Santa Cruz Biotechnology, Dallas, TX, USA, Plin5; sc-240,627, Santa Cruz Biotechnology, p-PKA substrate; 9621 s, Cell Signaling Technology, Danvers, MA, USA, CGI-58; sc-100,468, Santa Cruz Biotechnology, ATGL; sc-67,355, Santa Cruz Biotechnology, HSL; sc-25,843, Santa Cruz Biotechnology). Membranes were developed using horseradish peroxidase-conjugated anti-goat, mouse, or rabbit IgG, followed by incubation with ECL solution (Amersham Pharmacia Biotech, Piscataway, NJ, USA), followed by detection using a Fuji LAS-4000 Imaging station (ImageQuantTMLAS-4000, GE Healthcare, Little Chalfont, UK).
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2

Quantitative Analysis of Eye Tissue Proteins

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Mouse eye tissues and cultured cell pellets were sonicated in RIPA buffer with 1x Halt protease inhibitor cocktail (Thermo Scientific). Lysates of total cellular proteins were collected by centrifugation at 21,000 × g for 15 min at 4°C. The total protein concentration of eye tissue and cell lysates were determined using Bradford Reagent55 (link) or Pierce BCA Protein Assay Kit (Thermo Scientific). The equal amount of protein (20 or 40 μg) was resolved in 10% SDS-PAGE and transferred onto the nitrocellulose membrane. Western blot analysis was performed with primary antibodies: anti-PNPLA2 (1:1000, 2183S, Cell Signaling Technology), anti-CGI-58 (1:2000, sc-100468, Santa Cruz Biotechnology, for Western blot; 1:2000, ab183739, Abcam, for immunostaining), anti-RPE65 (1:1000, house-made antibody),49 (link) anti-LAMP1 (1:1000, 21997-1-AP, Proteintech), anti-Calnexin (1:1000, ab10286, Abcam), Anti-PLIN2 (1:1000, ab108323, Abcam), Anti-PLIN3 (1:1000, 106941-1-AP, Proteintech), and anti-β-Actin (C4) HRP (1:1000, sc-47778 HRP, Santa Cruz Biotechnology). HRP-conjugated secondary antibodies, anti-mouse IgG, anti-rabbit IgG, and anti-goat IgG (1:5000, Vector Laboratories) were used. Western blot signals were acquired using a ChemiDoc system (Bio-Rad), and the signal intensities were quantified using a densitometry application, Image Lab software version 6.1.0 (Bio-Rad).
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