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R statistical environment version 3

Sourced in Austria

R is an open-source software environment for statistical computing and graphics. It provides a wide variety of statistical and graphical techniques, including linear and nonlinear modeling, classical statistical tests, time-series analysis, classification, clustering, and more. R is highly extensible through the use of packages and can be run on a variety of operating systems.

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4 protocols using r statistical environment version 3

1

Sociodemographic and Clinical Factors in Trauma

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Data were collected in a dedicated database. A descriptive analysis was performed for sample description and frequencies and for IES-R and HADS subscales results (HADS-A, HADS-D, and HADS-General). A correlation analysis was implemented to detect the univariate associations between sociodemographic characteristics, clinical data, and the IES-R score, as well as the subscales of the HADS. The correlation between the continuous variables was calculated using Pearson's Correlation Coefficient (r). Eta squared was used for comparison between categorical variables and continuous variables. Student t-test was performed to assess the difference between the mean value in two groups. Statistical significance was achieved at a p < 0.05. All statistical analyses were performed using the using the R statistical environment, version 3.5.2 (The R Foundation for Statistical Computing; Vienna, Austria).
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2

Statistical Analysis of Study Sample

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Descriptive statistical analyses of study sample were performed, and their results were expressed as mean ± standard error of the mean (SEM) and frequencies (%), depending on the nature of variables. Comparisons of socio-demographic and clinical parameters between two groups of interest were carried out with the t-test (for continuous variables) and the Pearson χ2 test (for categorical variables). Comparisons between more than two groups were studied through one-way analysis of variance (ANOVA) followed by Bonferroni post-hoc test, where necessary. The correlation between continuous variables was also considered and calculated using Pearson’s Correlation Coefficient (r). P-values lower than 0.05 were regarded as significant. All the analyses were performed using the R statistical environment, version 3.5.2 (The R Foundation for Statistical Computing; Vienna, Austria), NCSS 2007 Statistical Software, version 0.7.10 (NCSS, LLC Company) and GraphPad Prism, version 7.04 (GraphPad Software; San Diego, USA).
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3

Nonlinear Modeling of Dabigatran Pharmacology

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Nonlinear mixed-effects modeling was performed using NONMEM version 7.3.0 (Icon Development Solutions, Ellicott City, Maryland, United States). Data preparation, graphical summaries, and nonparametric regressions of dabigatran concentration–laboratory coagulation time parameters against age were performed using the R statistical environment version 3.3.3 (R Foundation for Statistical Computing, Vienna, Austria).
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4

Robust PK Modeling and Simulation using NONMEM

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Both the PK model and the population PK simulation analysis were performed using NONMEM version 7.3.0 (Icon Development Solutions). Data management and further processing of NONMEM outputs were performed using the R statistical environment version 3.3.3 (R Foundation for Statistical Computing). PK model visual predictive checks and log‐likelihood profiling were run using Perl‐speaks‐NONMEM version 4.4.8.24, 25
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