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β mercaptoethanol

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β-mercaptoethanol is a reducing agent commonly used in biochemical applications. It functions by breaking disulfide bonds and maintaining proteins in a reduced state.

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1 654 protocols using β mercaptoethanol

1

Fibroblast and Induced Pluripotent Stem Cell Media Formulations

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Fibroblast medium: DMEM (ThermoFisher), 10% fetal bovine serum (FBS, Hyclone), 1% non-essential amino acids (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 55 μM β-mercaptoethanol (ThermoFisher) and 1 mM sodium pyruvate (ThermoFisher). Naive medium (t2iLGoY)19 (link): 50:50 mixture of DMEM/F12 (ThermoFisher) and neurobasal medium (ThermoFisher), supplemented with 2 mM l-glutamine (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 0.5% N2 supplement (ThermoFisher), 1% B27 supplement (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 10 ng ml−1 human leukaemia inhibitory factor (made in-house), 250 μM l-ascorbic acid (Sigma), 10 μg ml−1 recombinant human insulin (Sigma), 1 μM PD0325901 (Miltenyi Biotec), 1 μM CHIR99021 (Miltenyi Biotec), 2.5 μM Gö6983 (Tocris), 10 μM Y-27632 (Abcam). Primed hiPS cell medium (KSR/FGF2): DMEM/F12 (ThermoFisher), 20% knockout serum replacement (KSR) (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 1% non-essential amino acids (ThermoFisher), 50 ng ml−1 recombinant human FGF2 (Miltenyi Biotec), 1% penicillin-streptomycin (ThermoFisher). Primed hiPS cell medium (Essential 8 (E8)): 10 ml of E8 supplement (Gibco) to 500 ml medium basal (Gibco), supplemented with 1% penicillin-streptomycin (Gibco).
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2

Fibroblast and Induced Pluripotent Stem Cell Media Formulations

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Fibroblast medium: DMEM (ThermoFisher), 10% fetal bovine serum (FBS, Hyclone), 1% non-essential amino acids (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 55 μM β-mercaptoethanol (ThermoFisher) and 1 mM sodium pyruvate (ThermoFisher). Naive medium (t2iLGoY)19 (link): 50:50 mixture of DMEM/F12 (ThermoFisher) and neurobasal medium (ThermoFisher), supplemented with 2 mM l-glutamine (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 0.5% N2 supplement (ThermoFisher), 1% B27 supplement (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 10 ng ml−1 human leukaemia inhibitory factor (made in-house), 250 μM l-ascorbic acid (Sigma), 10 μg ml−1 recombinant human insulin (Sigma), 1 μM PD0325901 (Miltenyi Biotec), 1 μM CHIR99021 (Miltenyi Biotec), 2.5 μM Gö6983 (Tocris), 10 μM Y-27632 (Abcam). Primed hiPS cell medium (KSR/FGF2): DMEM/F12 (ThermoFisher), 20% knockout serum replacement (KSR) (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 1% non-essential amino acids (ThermoFisher), 50 ng ml−1 recombinant human FGF2 (Miltenyi Biotec), 1% penicillin-streptomycin (ThermoFisher). Primed hiPS cell medium (Essential 8 (E8)): 10 ml of E8 supplement (Gibco) to 500 ml medium basal (Gibco), supplemented with 1% penicillin-streptomycin (Gibco).
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3

Induced Pluripotent Stem Cell Differentiation

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iPSC medium: KO-DMEM (Life Technologies, Carlsbad, CA, USA), supplemented with 20% KnockOut Serum Replacement (Life Technologies), 1X MEM non-essential amino acids (Life Technologies), 2 mM Glutamine (Life Technologies), 50 µM β-mercaptoethanol (Life Technologies), and 10 UI/mL gentamycin (Life Technologies).
Differentiated medium: DMEM/F12 (Life Technologies), 2% B27 without vitamin A (Life Technologies), 5 µg/mL heparin (Sigma-Aldrich, Saint-Quentin Fallavier, France), and 100 µM β-mercaptoethanol (Life Technologies).
Neural induction medium: 1:1 DMEM/F12 (Life Technologies) and Neurobasal A (Life Technologies), 1% N2 supplement (Life Technologies), 2% B27 without vitamin A (Life Technologies), and 100 µM β-mercaptoethanol (Life Technologies).
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4

Cell Culture Conditions for Murine Cell Lines

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MutuDC 1940 (obtained from Hans Acha Orbea) cells were grown in IMDM (Sigma-Aldrich, #I3390-500ML), supplemented with 8% FCS (Biosera or Eurobio), 10 mM HEPES (#15630080), 2 mM glutamax (#35050061), 100 U/mL penicillin, 100 μg/mL streptomycin (#15140122) and 50 μM β-mercaptoethanol (#31350010) (all from Life Technologies). B3Z hybridomas were grown in RPMI-glutamax (Gibco, #61870010), supplemented with 10% FCS (Biosera or Eurobio), 10 mM HEPES, 1 mM sodium pyruvate (#11360070), 1% MEM non-essential amino acids (#11140035), 100 U/mL penicillin, 100 μg/mL streptomycin and 50 μM β-mercaptoethanol (all from Life Technologies). HEK293T were grown in DMEM-glutamax (Gibco, #31966021), supplemented with 10% FCS (Biosera or Eurobio).
All cell lines used tested negative from Mycoplasma by PCR.
Splenic dendritic cells were grown in RPMI-glutamax (Gibco, #61870010), supplemented with 10% FCS (Biosera), 10 mM HEPES, 1 mM sodium pyruvate (#11360070), 1% MEM non-essential amino acids (#11140035), 100 U/mL penicillin, 100 μg/mL streptomycin and 50 μM β-mercaptoethanol (all from Life Technologies).
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5

Cell Culture Protocols for Various Cell Types

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HEK293 and HeLa cells were cultured in high-glucose Dulbecco’s modified Eagle’s medium (DMED; Gibco) supplemented with 10% FBS (Hyclone) and antibiotics (100 U/ml penicillin and 100 μg/ml streptomycin; Gibco). For MEFs, the cell culture medium consists of 10% FBS (Hyclone), 1 mM sodium pyruvate (Gibco), 0.055 mM β-mercaptoethanol (Gibco), 2 mM L-GlutaMax (Gibco), 0.1 mM NEAA (Gibco), and antibiotics (100 U/ml penicillin and 100 μg/ml streptomycin; Gibco). For iPSC generation cell culture media, 1000 U/ml LIF (Millipore) were added based on MEF media. iPSC stable clones were maintained on mitomycin C-treated MEF feeder cells in knockout DMEM medium (Gibco) supplemented with 15% KSR, 1 mM sodium pyruvate (Gibco), 0.055 mM β-mercaptoethanol (Gibco), 2 mM L-GlutaMax (Gibco), 0.1 mM NEAA (Gibco), 100 U/ml penicillin (Gibco), 100 μg/ml streptomycin (Gibco) and 1000 U/ml LIF (Millipore). CGR8 ES cells were cultured on gelatin-coated dishes, in GMEM medium supplemented with 10% FBS (Millipore), 1 mM sodium pyruvate (Gibco), 0.055 mM β-mercaptoethanol (Gibco), 2 mM L-GlutaMax (Gibco), 0.1 mM NEAA (Gibco), 100 U/ml penicillin (Gibco), 100 μg/ml streptomycin (Gibco) and 1000 U/ml LIF (Millipore). P19 EC cells were maintained on gelatin-coated dishes, in α-MEM medium supplemented with 10% FBS (Hyclone) and 100 U/ml penicillin (Gibco), 100 μg/ml streptomycin (Gibco).
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6

Engineered EGF Variants for Tissue Repair

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(i) Soluble EGF (sEGF): Human recombinant EGF (ProspecBio) was administered at 300 ng per treatment dissolved in 5% (w/v) polyethylene glycol (PEG) in a total volume of 30 μL. (ii) Crosslinked EGF: EGF was conjugated with sulfosuccinimidyl-4-(N-maleimidomethyl)-cyclohexane-1-carboxylate (s-SMCC; ThermoPierce) following manufacturer’s protocol. This conjugated EGF is referred to as CxEGF in this study. The conjugation efficiency was determined by the well-established TNBS assay (ThermoPierce) to determine the reduction in free-amine groups of s-SMCC following manufacturer’s protocol. (iii) Quenched EGF (qEGF): s-SMCC-conjugated EGF was incubated with 10 molar excess of β-mercaptoethanol (FisherSci) and dialyzed against PBS to remove unreactive β-mercaptoethanol. This is referred to as qEGF in this study. (iv) Vehicle control: 5% (w/v) PEG in Hank’s balanced salt solution was used as vehicle control. For all experimental groups, 5% PEG was used as our vehicle.
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7

Primed-hiPSCs to Naive-hiPSCs Conversion

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Primed-hiPSCs of both patients were maintained on irradiated mouse embryonic fibroblasts (MEFs) in DMEM/F12 GlutaMAX supplemented with 20% KSR (thermofisher), 1X non-essential amino acids, 50 µM β-mercaptoethanol (thermofisher), and 10 ng/ml of bFGF (thermofisher). Media were replaced every day. Cells were passaged as clumps every 4 to 6 days using trypsin and 10 µM of ROCK inhibitor (TEBU-Bio). Primed-like hiPSCs were converted into a naive state by cultivating them on MEFs feeders cells in knock-out DMEM medium (thermofisher) supplemented with 20% KSR (thermofisher), 2 mM L-Glutamine (thermofisher), 0.1 mM MEM NEAA (thermofisher) and 50 µM β-mercaptoethanol (thermofisher) and containing basic fibroblast growth factor (b-FGF, thermofisher), human leukemia inhibitory factor (LIF, Peprotech), transforming growth factor-β1 (TGFβ, TEBU-Bio), and four small inhibitory molecules (4i), 3 μM CHIR99021 (R&D systems), 1 μM PD0325901 (R&D systems), 5 μM SB203580 (R&D systems), and 5 μM SP600125 (R&D systems)27 (link). Cells were maintained in 4i hiPSC medium for two weeks replacing daily with fresh medium. The growing naive-hiPSCs colonies were picked up and passaged every 2–3 days as single cells with accutase. For each passage, 10 μM of ROCK inhibitor (TEBU-Bio) were used.
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8

Murine Embryonic Stem Cell Culture and Editing

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During routine passage and CRISPR editing, murine ESCs were cultured in Serum+LIF media: 15% Hyclone FBS (ThermoFisher), 1x Penicillin/Streptomycin/Glutamine (ThermoFisher), 1x Non-essential amino acids (ThermoFisher), 55μM β–mercaptoethanol (ThermoFisher), 1xPrimocin (Invivogen) and 1000U/mL ESGRO LIF (Millipore) in KnockOut DMEM (ThermoFisher). Cells were passaged with 0.25% Trypsin every three days and cultured on MEFs. Prior to all RNA-seq or ATAC-seq experiments, cells were cultured for at least five passages in 2i+LIF media: 1x N2 supplement, 1xB27 supplement, 1x Penicillin/Streptomycin/Glutamine (ThermoFisher), 1x Non-essential amino acids (ThermoFisher), 55μM β–mercaptoethanol (ThermoFisher), 1xPrimocin (Invivogen), 3μM CHIR99021 (Stemgent), 0.5μM PD0325901 (Stemgent) and 1000U/mL ESGRO LIF (Millipore) in a 50%/50% mixture of DMEM/F12 without HEPES (ThermoFisher) and Neurobasal media (ThermoFisher). Cells passaged in 2i+LIF were passaged every three days with 0.25% trypsin and plated at 50k cells/well onto wells pretreated with poly-L-Ornithine (Sigma) and Laminin.
Murine EpiSCs were a gift from P. Tesar and were cultured in Primed hESC media12 (link). EpiSCs were passaged with 1xCollagenase Type IV (Life Technologies) every three days.
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9

Pluripotent and Extraembryonic Cell Culture

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ES cells were cultured on gelatin-coated in ES-Medium consisting of DMEM + GlutaMAX (Gibco: 31966-021) supplemented with 2 mM L-glutamine (Gibco: 25030-024), 50 U/ml penicillin/streptomycin (Gibco: 15140-122), 1× nonessential amino acids (Gibco: 11140-035), 1× essential amino acids (Gibco: 11130-036), 0.1 mM β-Mercaptoethanol (Gibco: 31350-010), 15% FCS (Gibco: 10270-106), LIF (1000 U/ml; Sigma–Aldrich: ESG1107), and 2i (3 µM CHIR-99021, Cayman Chemical: 13122; 1 µM PD0325901, BioGems: 3911091). Induced TS cells reprogrammed from 5 Factor ESCs were cultured in TSC Medium consisting of advanced RPMI 1640 (Thermo Fisher Scientific: 11875-093), 20% FCS, 2 mM L-glutamine, 1 mM sodium pyruvate (Thermo Fisher Scientific: 11360070), 50 U/ml penicillin/streptomycin, and 0.1 mM β-Mercaptoethanol. A mixture consisting of 70% of feeder-MEF conditioned TSC medium and 30% fresh, unconditioned TSC medium was prepared and supplemented with FGF4 (Reliatech: #100-017 L; 25 ng/ml), Heparin (Sigma–Aldrich: #H3149-10KU; 1 µg/ml) for the culture of iTSCs. Induced XEN cells reprogrammed from iGATA6 ESCs were cultured on gelatin-coated culture dishes in XEN cell culture medium, consisting of RPMI 1640, 15% FCS, 2 mM L-glutamine, and 50 U/ml penicillin/streptomycin.
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10

Murine Embryonic Stem Cell Culture and Editing

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During routine passage and CRISPR editing, murine ESCs were cultured in Serum+LIF media: 15% Hyclone FBS (ThermoFisher), 1x Penicillin/Streptomycin/Glutamine (ThermoFisher), 1x Non-essential amino acids (ThermoFisher), 55μM β–mercaptoethanol (ThermoFisher), 1xPrimocin (Invivogen) and 1000U/mL ESGRO LIF (Millipore) in KnockOut DMEM (ThermoFisher). Cells were passaged with 0.25% Trypsin every three days and cultured on MEFs. Prior to all RNA-seq or ATAC-seq experiments, cells were cultured for at least five passages in 2i+LIF media: 1x N2 supplement, 1xB27 supplement, 1x Penicillin/Streptomycin/Glutamine (ThermoFisher), 1x Non-essential amino acids (ThermoFisher), 55μM β–mercaptoethanol (ThermoFisher), 1xPrimocin (Invivogen), 3μM CHIR99021 (Stemgent), 0.5μM PD0325901 (Stemgent) and 1000U/mL ESGRO LIF (Millipore) in a 50%/50% mixture of DMEM/F12 without HEPES (ThermoFisher) and Neurobasal media (ThermoFisher). Cells passaged in 2i+LIF were passaged every three days with 0.25% trypsin and plated at 50k cells/well onto wells pretreated with poly-L-Ornithine (Sigma) and Laminin.
Murine EpiSCs were a gift from P. Tesar and were cultured in Primed hESC media12 (link). EpiSCs were passaged with 1xCollagenase Type IV (Life Technologies) every three days.
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