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Ds fi1

Manufactured by National Instruments
Sourced in France

The DS-Fi1 is a digital microscope camera designed for laboratory use. It captures high-quality images and video through a microscope objective. The DS-Fi1 features a 5-megapixel CMOS sensor and provides live video output.

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12 protocols using ds fi1

1

Hematopoietic Cells Morphology Analysis

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Cells collected from the hematopoietic cultures on days 12–14 of differentiation were analyzed after May–Grünwald–Giemsa staining. Approximately 105 cells were washed twice with PBS. Cytospins were performed on slides using a Cytospin 4 centrifuge (ThermoFisher Scientific, Illkirch, France). Thereafter, slides were air-dried for 25 min and stained with RAL Kit 555 (RAL Diagnostics, Martillac, France, 361550-0000). The slides were analyzed on a Nikon Eclipse 90i microscope (Champigny sur Marne, France), and images were taken with a Nikon camera DS-Fi1 and NIS-Elements V. 5.20 software.
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2

Transwell Assay for Macrophage Migration

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One hundred thousand macrophages were seeded into 8 μm transwell inserts, which were placed into wells filled with RPMI-1640 media containing 1% FBS, 2 mM l-glutamine, 50 units/ml penicillin and 50 mg/ml streptomycin supplemented with 50 ng/ml CCL2 (MCP-1). The cells were incubated for either 90 min or 16 h, after which the inserts were removed from the wells. Cells on the upper side of the insert membrane were gently removed using cotton buds, whilst the cells on the lower side were fixed in ethanol and stained with 1 mg/ml crystal violet. The fixed, stained cells were counted in multiple fields of view using ImageJ software. Pictures were taken using a light microscope (Nikon Eclipse TS100, Objective 20 ×) with an attached digital camera (Nikon DS-Fi1) and NIS-Elements F 3.00 software.
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3

Imaging and Digitizing Plant Specimens

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Polished sections were digitised using an Epson Perfection V330 photo scanner with high resolution (1,200 × 1,200 dpi). For microscopic analysis a Nikon SMZ 1500 stereomicroscope was used, mounted with a Nikon DS-Fi 1 digital camera and NIS Elements software (version 3.2). The NIS Elements software was also used for anatomical measurements. The parenchyma portion of secondary xylem was estimated from calculating the surface percentage of rays in a radial section of KH0196-02c_I (see File S2).
A 0.25 m long stem segment (KH0196-02a) was photogrammetrically digitised to visualise frond scars left on the stem surface. For this, 22 photos covering 360° of the stem’s circumference were captured using a Panasonic Lumix DMC-G3 camera equipped with an Olympus Digital objective lens (40 mm focal width/f 5.4). The 3D model originated from using the open-source software Regard 3D.
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4

Wing Preparation for Fly Imaging

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Female adult flies were frozen upon collection with CO2, with the wings removed for direct imaging. For the quantification, frozen female flies were dehydrated in serial solutions of EtOH (50%, 70% ×2, 90% ×2) for 10 min each, followed by 10 min in acetone. Flies were kept overnight in fresh acetone, and the wings were then mounted in Canada Balsam (Sigma; C1795-25ML). Wings, or representative adult females, were imaged with a Nikon SMZ1500 microscope equipped with a Nikon DS-Fi1 camera controlled by NIS-Elements BR software.
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5

Microscopy Image Preprocessing Protocol

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Microscopy was performed on a Nikon Eclipse 80i microscope using Nikon DSFi1 camera and NIS-Elements BR 3.10 software. Images were balanced globally in Photoshop CS6® (Adobe) using the curves tool or the levels function for white balance. No additional adjustments were made locally to any images or portions thereof.
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6

Histological Analysis of Cardiomyocytes

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Tissues were extracted and placed in tissue clamps in 10% neutral buffer formalin (NBF) overnight. The following day samples were rinsed twice in PBS and stored in 70% ethanol. Tissue fragments were embedded in paraffin, sectioned and mounted on glass slides. For histological and morphometric studies, the sections were stained with hematoxylin and eosin or Masson’s trichrome. Digital images were collected with a Nikon Ti2 motorized inverted microscope equipped with a 4x or 40x objective lens. Images were acquired with a Nikon DS-Fi1 color camera controlled with NIS-Elements image acquisition software. The quantitative analysis of cardiomyocyte cross-sectional height and width and nuclear diameter were measured using Fiji image processing software.
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7

Histological Analysis of Organ Damage

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For histological analysis, the samples were kept for 24 h in 10% formaldehyde. After fixation, the material was submitted to dehydration followed by paraffin embedding, and 4 μm thick histological sections were stained with hematoxylin-eosin, for general morphology studies.
The following scores were used for organ evaluation: Chiu score was used for intestinal evaluation10 (link), Scheuer score for hepatic evaluation11 (link), ventilator-induced lung injury score for pulmonary evaluation12 (link), and a modified Banff score for renal evaluation13 (link).
The histomorphometric analysis consisted of measuring the height and the diameter of the villi, the depth of crypts, the thickness of lamina propria, and the thickness of the muscle layer of the intestine.
The samples were analyzed with a Nikon Eclipse 50i optic microscope. Ten fields per sample were randomly selected and analyzed with a DS-Fi1 camera, using NIS-Elements software version 4.6 to acquire images. The different variables were quantified, and the results were transferred to an electronic spreadsheet, showing an average of the measures.
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8

Histological Evaluation of Liver Steatosis

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Tissues were fixed in 10% neutral buffer formalin overnight, embedded in paraffin, sectioned and mounted on glass slides and stained with hematoxylin and eosin or Sirius red. Images were collected with a Nikon Ti2 motorized inverted microscope and acquired with a Nikon DS-Fi1 color camera using NIS-Elements software. Analysis was performed using Fiji. Liver steatosis was graded based on the percentage of fat within the hepatocytes: grade 0 (healthy, <5%), grade 1 (mild, 5%−33%), grade 2 (moderate, 34%−66%), and grade 3 (severe, >66%).
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9

Histological Assessment of Lung Pathology

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During necropsy, the inferior lung lobe was inflated with 10% formalin/PBS and placed into 10% formalin/PBS. Following routine processing for paraffin-embedding, 5 μm sections were stained with hematoxylin and eosin (H&E) and assessed for degree of lung involvement by a veterinary pathologist blinded to the experimental groupings using a defined scoring system adapted from Dormans et al. [36 (link)]. The score was based on the total number of lesions, overall extent of changes, presence of peribronchiolitis, perivasculitis, alveolitis, “granuloma" formation and degree of necrosis. The scale ranges from zero (no apparent changes) to five (severe changes). Microphotographs were captured using a Nikon Eclipse 51E microscope equipped with a Nikon DS-Fi1 camera with a DS-U2 unit and NIS elements F software. Microphotographs are reproduced without manipulation other than cropping and adjustment of light intensity.
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10

Fluorescence Microscopy of Paralyzed Organisms

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All fluorescence microscopy was performed on a Nikon Eclipse 90i with a Nikon DS-FI1 color camera, using NIS Elements software. Animals were washed off the plates with M9 buffer and paralyzed in 1 mM levamisole in a microfuge tube. The suspended animals were briefly centrifuged, and 2 µL of paralyzed animals were placed on an agar pad. Animals were aligned with a hair pick and photographed with a 10X Nikon CFI Plan Fluor. GFP excitement range was 450–490 nm and emission was 500–550 nm, while mCherry excitation was from 528–553 nm and emission was 590–650 nm. Pseudocolorization was added linearly by NIS Elements, and images were not altered any further.
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