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6 protocols using mab4a

1

Immunofluorescence Staining of Transfected HEK293 Cells

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HEK293 cells were cultured and transiently transfected as described (Wu et al., 2007 (link)). Briefly, cells were plated and cultured on poly-L-lysine-coated glass coverslips. Calcium phosphate transfection was performed one day later using 2 μg of total DNA per milliliter of medium. The following constructs were transfected: GluA2, GluN1, GlyRα1, LGI, and Caspr. Transfected HEK293 cells were stained as described previously. (Dalmau et al., 2008 (link)) Briefly, 16–24 h after transfection cells were fixed in 4% paraformaldehyde in PBS, washed with PBS, permeabilized with Triton X-100, and then blocked with BSA. Cells were then incubated overnight with patient serum (1:100) or CSF (1:5) and commercially available antibodies against the following transfected proteins: GluA2 (rabbit polyclonal 07-598, Millipore), GluN1 (mouse monoclonal 556-308, BD Biosciences), GlyRα1 (mouse monoclonal mAb4a 1:200, Synaptic Systems), LGI (rabbit polyclonal 93228 1:10,000, Abcam), and Caspr (rabbit polyclonal 30868, Abcam). The following day, coverslips were washed with PBS and placed in secondary antibody (1:1000 Alexa Fluor 488 goat anti-human IgG and 1:1000 Alexa 568 goat anti-mouse or anti-rabbit diluted in PBS) for one hour at 37°C. After washing, cells were mounted on glass slides in mounting medium with DAPI (Vectashield), and stored at 4°C until imaging.
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2

Quantitative Western Blotting of Synaptic Proteins

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40 μg protein/lane were loaded on a 11% polyacrylamide gel. Proteins were transferred to nitrocellulose membrane (GE HealthCare, Freiburg, Germany). Membranes were washed in TBST (TBS with 1% Tween 20), blocked for 1 h in 3% bovine serum albumin (BSA, Carl Roth, Karlsruhe, Germany) and incubated in MAb4a (1:500; 146,011, RRID:AB_887722, Synaptic Systems, Göttingen, Germany), anti-gephyrin (1:1,000; 147,111, RRID:AB_887719, Synaptic Systems, Göttingen, Germany), anti-GFP (1:5,000; SC8334, RRID:AB_641123, Santa Cruz Biotechnology, Dallas, TX, United States) or anti-pan-cadherin antibody (1:1000; 4,068, RRID:AB_2158565, Cell Signaling, Danvers, MA, United States) overnight at 4°C. As secondary antibodies horse radish peroxidase (HRP) conjugated goat anti-mouse (1:15,000, 115–035-146, RRID:AB_2307392, Dianova, Hamburg, Germany) or goat anti-rabbit secondary antibodies (1:15,000, 111–036-003, RRID:AB_2337942, Dianova, Hamburg, Germany) were used. Signal detection was done using the SuperSignal West (Thermo Fisher Scientific, Waltham, MA, United States). Western Blot Images were taken using the Chemostar Touch Imager (Intas Science Imaging Instruments, Göttingen, Germany).
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3

Subcellular Localization of GlyR Variants

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COS7 cells transiently expressing GlyR α1 (wt) or GlyR α1 variants were stained in permeabilized cells with primary antibodies MAb4a (Synaptic Systems, Göttingen Germany) and a polyclonal anti-calnexin antibody (1:500, Abcam, Cambridge, UK) for ER staining. The detection of ERGIC was done by the monoclonal ERGIC53 antibody (1:500, Enzo Life Science, Lörrach, Germany) and cis-Golgi stainings using a monoclonal antibody anti-GM130 (1:500, BD Transduction Laboratories, Heidelberg, Germany) together with a GlyR α1 specific antibody (Chemicon, Darmstadt, Germany). Secondary antibodies used were goat anti-mouse Cy3/Alexa488 and, goat anti–rabbit Cy3 (Dianova, Hamburg, Germany) diluted 1:500. All stainings were subjected to confocal microscopy on a DMIRE2 confocal microscope.
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4

Protein Separation and Western Blotting

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For protein separation, 11% PAM (polyacrylamide) gels were used. Gels were run at 150 V for 90 min. Proteins were transferred to nitrocellulose (GE Healthcare, Freiburg, Germany) using a wet blot transfer system (transfer buffer: 25 mM TRIS, 192 mM glycine, 10% ethanol) (Bio-Rad, Hercules, CA, United States). For GlyR protein transfer, 2 h at 200 mA were used. For larger proteins, e.g., cadherin, overnight blotting at 100 mA was performed. Membranes were blocked for 1 h with 5% BSA in TBS-T (TBS with 1% Tween 20). Primary antibodies were incubated overnight at 4°C. Proteins were detected with the pan-α antibody for GlyRs (mAb4a, Synaptic Systems, Göttingen, Germany, Cat. No. 146 011, 1:500) and pan-cadherin (Cell Signaling Technology, Danvers, MA, United States, Cat. No 4068, 1:1500) served as loading control. Signals were detected using the SuperSignal West (Thermo Fisher Scientific, Waltham, MA, United States).
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5

Protein Separation and Western Blotting

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For protein separation, 11% polyacrylamide gels were used. Gels were run at 150 V for 90 min. Proteins were transferred to a nitrocellulose membrane (GE Healthcare, Freiburg, Germany) using a wet blot transfer system (Bio-Rad, Hercules, CA, USA). For GlyR protein transfer, 2 h at 200 mA were used. Cadherin transfer required overnight blotting at 100 mA. Membranes were blocked for 1 h with 5% BSA in TBS-T (TBS with 1% Tween 20). Primary antibodies (pan-α antibody for GlyRs, MAb4a, Synaptic Systems, Göttingen, Germany, 1:500 in TBS-T and pan-cadherin, Cell Signaling Technology, Danvers, MA, USA, 1:1.500 in TBS-T) were incubated overnight at 4°C. Signals were detected using SuperSignal West Pico (Thermo Fisher Scientific, Waltham, MA, USA).
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6

Immunostaining of Serine Racemase and D-Serine

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Rats were deeply anesthetized with pentobarbital (6%) and perfused transcardially with phosphate buffer (PB) 0.1 M (pH 7.3) and paraformaldehyde (4%) supplemented with 0.25% glutaraldehyde. The brain was post-fixed overnight in the same solution and finally cryoprotected with 30% sucrose in 0.1M PB. Brains were sliced (30 μm) using a vibratome and immunostainings were performed as previously described [13 (link)]. Immunostained sections were observed with a ZEISS LSM 710 confocal microscope (ZEN software) with 405 diode, 488 and 633 laser lines. All image acquisitions were achieved using 40X and 60X magnification and variable numerical zooms. Channels were acquired with sequential scanning with a pinhole aperture of 1 airy unit each. Images were then analyzed using ImageJ software. Staining specificity was verified with negative controls in which primary or secondary antibodies were omitted. Affinity-purified primary antibodies were: mouse monoclonal anti serine racemase (Transduction Laboratories: 1/1000), rabbit polyclonal anti-d-serine (GemacBio: 1/1000), mouse polyclonal anti-GFAP (Sigma: 1/2000, clone G-A-5), mouse monoclonal anti-glyR (mAb4a, Synaptic Systems 1/100). Secondary antibodies were obtained from Invitrogen: Alexa 488-Goat anti-mouse (1/1000), Alexa 633-Goat anti-rabbit (1/1000) and from Life Technologies: FITC conjugated mouse antibody (1/400).
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