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8 protocols using sodium hydrogen sulfide

1

Comparison of Cellular Signaling Pathways

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Student’s t- test (for comparison of two sets of data) and one-way analysis of variance (comparison of three or more sets of data) were used. Data were analyzed using PRISM software and represented as mean±standard deviation. Post hoc testing was based on unpaired t-test with Bonferroni correction. Significance level was set at p<0.05.
Caffeine, sodium cyanide (NaCN), carbonyl cyanide-4-(trifluoromethoxy)phenylhydrazone (FCCP), sodium hydrogen sulfide (NaHS), S-Nitroso-N-acetylpenicillamine (SNAP), bromo-cDP-ribose (Br-cADPR-ribose), cyclopiazonic acid (CPA) were purchased from Sigma Aldrich Co. BTP-2 (also named YM 58483) and all receptor agonists were purchased from Tocris (Ellisville, MO, USA). Fura-2 AM was purchased from TEF Labs.
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2

Mitochondrial Dynamics in Metabolic Stress

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Sodium hydrogen sulfide (NaHS), N-acetyl-cysteine (NAC, an inhibitor of reactive oxygen species, ROS), Mdivi-1 and palmitate were purchased from Sigma Chemical Co. (St. Lowis, MO, USA). Cyclin D1, p27, PCNA, p21 antibodies were obtained from Cell Signaling Technology (Danvers, USA). CSE, Drp1, Mfn2, MMP2, MMP9, Collagen I, and Collagen III were from ProteinTech Bioengineering Institute (Wuhan, China). Mitosox and Mitotracker green were purchased from Roche (Mannheim, Germany). All others chemicals were from Sigma or Santa Cruz.
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3

Signaling Pathways Modulation in Cells

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Sodium hydrogen sulfide (NaHS), H2O2, PD98059 (an inhibitor of ERK1/2), LY294002 (an inhibitor of PI3K) and AG1478 (an inhibitor of EGFR) were purchased from Sigma Chemical Co. (St. Louis, MO, USA). The primary antibodies for anti-cleaved caspase-3 and -9, Bcl-2, cytochrome c (Cyt-c), c-myc, c-jun, c-fos and GAPDH were from Proteintech (Wuhan, China). The anti-ERK1/2, p-ERK1/2, PI3K, p-PI3K, GSK-3β, p-GSK-3β, Akt, p-Akt, HB-EGF, EGFR and p-EGFR antibodies were obtained from Cell Signaling Technology (Denver, CO, USA). Assay kits for lactate dehydrogenase (LDH) and creatine kinase (CK) were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). The Cell Counting Kit-8 (CCK-8) was obtained from Boster Bio-engineering Limited Company (Wuhan, China). The HB-EGF ELISA kit was purchased from Elabscience Biotechnology (Wuhan, China). All other chemicals were from Sigma or Santa Cruz.
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4

Oxidative Stress Biomarkers in Neurodegenerative Models

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6-OHDA hydrobromide, tubastatin A, and sodium hydrogen sulfide were obtained from Sigma Aldrich. RNA isolation kits, cDNA synthesis, and SYBR Green/ROX master mix were from Qiagen. Primer sequences for PCR were obtained from Eurofins MWG (Operon). Protein carbonyl, lipid peroxidation, superoxide dismutase (SOD), catalase (CAT), and glutathione (GSH) assays kits were obtained from Cayman Chemicals, USA. The HDAC activity assay kit was obtained from Biomol, PA, USA. The HAT activity assay kit was acquired from Active Motif, Carlsbad, CA, USA. The Fluoro-Jade C assay kit was obtained from Millipore Sigma, Burlington, MA, USA. GFAP monoclonal antibody and the corresponding anti-mouse secondary antibody were obtained from Santa Cruz Biotechnology, USA. ELISA kits for IL-1β (ER1094), IL-2 (ER0039), IL-17 (ER0035), IL-8 (ER1623), IL-6 (ER0042), TH (ER0534), GFAP (ER0229), α-synuclein (ER0921), and TNF-α (ER1393) were obtained from Fine Biotech, China. All other chemical reagents used were analytical grade.
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5

Biochemicals for Enzymatic Assays

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DL-propargylglycine, aminooxyacetic acid, β-cyano-L-alanine, L-cysteine, and sodium hydrogen sulfide were purchased from Sigma-Aldrich Co.
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6

Endoplasmic Reticulum Stress Modulators

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Sodium hydrogen sulfide (NaHS), 4-PBA (an inhibitor of ERS), GSK2656157 (an inhibitor of PERK), STF083010 (an inhibitor of IRE 1α) were purchased from Sigma Chemical Co. (St. Louis, MO, USA). The primary antibodies for anti-Cyclin D1, p21Cip/WAF−1, cleaved caspase-3 and -9, Bcl-2, cytochrome c (Cyt c), GRP 78, CHOP, cleaved caspase-12, ATF 4, ATF 6, XBP-1 and GAPDH were from Proteintech (Wuhan, China). Hoechst 33342 was from Beyotime (Wuhan, China). The anti-PERK, eIF 2α and IRE 1α antibodies were obtained from Cell Signaling Technology (Denver, USA). H2O2 and PBS solution were from Sigma Chemical Co. (St. Louis, MO, USA). Western blotting relative solutions were from Santa Cruz Biotechnology (Dallas, USA).
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7

Sourcing Chemicals for Research

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The chemicals used in this study were purchased from Hi media®, India except Sodium hydrogen sulfide, bought from Sigma-Aldrich®.
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8

Inhibition of Oxidative Stress Pathway

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Sodium hydrogen sulfide (NaHS), N-acetyl-cysteine (NAC, an inhibitor of reactive oxygen species, ROS), Ammonium pyrrolidinedithiocarbamate (PDTC, a NF-κB inhibitor), AG 490 (a JNK2 inhibitor) were purchased from Sigma Chemical Co. (St. Louis, MO, USA). The anti-cleaved caspase-3 and -9, Bcl-2, cytochrome c (Cyt c), and GAPDH were from proteintech (Wuhan, China). Hoechst 33342 were from Santa Cruz (Bergheimer, Germany). The anti-IκBα-NF-κB and JNK2-STAT3 antibodies were obtained from Cell Signaling Technology (Danvers, USA). Assay kits for malondialdehyde (MDA), superoxide dismutase (SOD), Glutathione peroxidase (GSH-PX), catalase (CAT), lactate dehydrogenase (LDH), creatine kinase (CK) and ROS were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). All other chemicals were from Sigma or Santa Cruz.
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