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Deadend colorimetric tunel system

Manufactured by Promega
Sourced in United States, Germany

The DeadEnd Colorimetric TUNEL System is a laboratory tool used for the detection and quantification of apoptotic cells. It utilizes the TUNEL (Terminal deoxynucleotidyl Transferase dUTP Nick End Labeling) method to label the fragmented DNA of cells undergoing programmed cell death. The system provides a colorimetric assay that allows for the visualization and analysis of apoptotic cells.

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255 protocols using deadend colorimetric tunel system

1

Quantifying Apoptosis in Lung Tissue and MBECs

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TUNEL analysis was conducted using an In Situ Cell Death Detection kit (DeadEnd™ Colorimetric Tunel System; Promega Corporation). For lung tissue, tissue sections (4 µm) were deparaffinized using xylene, rehydrated in graded ethanol, and rehydrated for 3 min. The sections were then incubated with TUNEL (DeadEnd™ Colorimetric Tunel System; Promega Corporation ) for 2 h at 37˚C according to the manufacturer's protocol. For MBECs, cells were treated with 4% paraformaldehyde for 15 min at room temperature. Cells were then washed with PBST three times at room temperature and incubated with TUNEL (DeadEnd™ Colorimetric Tunel System, Promega) for 1 h at 37˚C according to the manufacturer's protocol. Cells were washed with PBS three times at room temperature and then incubated with 5% DAPI (Sigma-Aldrich; Merck KGaA) under Antifade mounting medium (cat. no. P0126; Beyotime Institute of Biotechnology) for 30 min at 37˚C. Finally, images of sections and cells were captured in six fields of view with a ZEISS LSM 510 confocal microscope at 488 nm at a magnification of x100. The apoptosis rate was measured using Developer XD 1.2 software (Definiens AG).
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2

Quantifying Hippocampal Neuron Apoptosis

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Apoptosis of hippocampal pyramidal neurons were analyzed using terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling (TUNEL) assay (DeadEnd™ Colorimetric Tunel System; Promega Corporation, Madison, WI, USA) according to the manufacturer's instructions. Hippocampal pyramidal neurons (1×105) were incubated TUNE (DeadEnd™ Colorimetric Tunel System; Promega Corporation). Cells were washed with PBST (Sigma-Aldrich) three times for 5 min at 37°C followed by incubated with 5% DPAI (Sigma-Aldrich; Merck KGaA) for 15 min at 37°C. Finally, images were captured with a ZEISS LSM 510 confocal microscope at 488 nm. The apoptosis rate was calculated by using the software of Developer XD 1.2 (Definiens AG, Munich, Germany).
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3

Apoptosis Evaluation in Tumor Samples

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TUNEL assay was carried out using the DeadEndTM colorimetric TUNEL system (Promega, Madison, WI) as previously described [36 (link)]. The average number of TUNEL positive cells in 10 random fields (n = 5–6) were calculated. Apoptotic cells in PCEPS-treated tumors were also evaluated using anti-cleaved caspase-3 antibody (1;300 dilution, for 18 hrs at 4°C, #9661, Cell Signaling Technology, Danvers, MA) as previously described [37 (link)]. The average number of anti-cleaved caspase-3 positive cells in 10 random fields (n = 5–6) was calculated.
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4

Quantifying Retinal Apoptosis Using TUNEL Assay

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To visualize apoptotic cells, we used the DeadEndTM Colorimetric TUNEL System (Promega, Madison, WI) to determine the apoptotic cells according to the manufacturer’s instructions. The nuclei were counterstained with DAPI. Five retinal sections were randomly selected per each condition. After the length of each section was measured (Image-Pro Plus software), the TUNEL-positive cells were counted in the whole section length (between ora serrata to ora serrata). The number of apoptotic cells was expressed per 200 μm of retinal section57 (link).
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5

Immunohistochemical Evaluation of Tumor Markers

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A section of each tumor was fixed in 10% formalin for IHC determinations. Sections of 3–4 μm were cut from each sample by deparaffinizing and dehydrating using Hemo-De (Fisher Scientific, Pittsburgh, PA, USA), followed by an alcohol series and washing in phosphate-buffered saline (PBS), pH 7.0. The slides were then incubated in 3% H2O2 for 20 min at room temperature to block peroxidase, and antigens were retrieved by boiling the slides in a microwave oven in 50 mM citrate buffer, pH 6.4. After blocking with goat serum, the slides were incubated with PCNA, Ki67, and cleaved caspase-3 antibodies (Google Biological Science and Technology Co., Ltd., Wuhan, China). The slides were counterstained with hematoxylin. H&E stained sections were also made. Apoptosis was detected by the TUNEL assay using the DeadEndTM Colorimetric TUNEL System (Promega, Madison, WI, USA) per manufacturer’s protocol. Three random microscopic fields were captured for each tumor section at 200× magnification.
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6

Histological Analysis of Mouse Liver

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Mouse livers were fixed with 10% formalin and embedded in paraffin. Paraffin-embedded liver sections were stained with H&E for morphological analysis. Sirius red staining was performed using a Picrosirius Red stain kit according to the manufacturer’s instructions (Abcam, Cambridge, MA, UK). For the terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) assay, paraffin-embedded sections were stained using the DeadEndTM colorimetric TUNEL system according to the manufacturer’s instructions (Promega Corporation, Madison, WI, USA).
For Oil Red O staining, fresh mouse livers were embedded in OCT solution, and frozen liver sections were fixed in 10% formalin for 10 min and washed with distilled water. Air-dried sections were stained with Oil Red O solution for 15 min and washed with 60% isopropanol. Then, stained sections were washed with distilled water.
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7

Quantifying Xenograft Follicular Atresia

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To analyze apoptosis after xenotransplantation, terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling (TUNEL) assay (DeadEndTM Colorimetric TUNEL System, Promega, Austria) was performed according to the manufacturer’s instructions, with 3,3-diaminobenzidine tetrahydrochloride (DAB) as chromogen. Mayer’s hemalaun solution (Merck Millipore, Germany) was used for counterstaining. Only sections where follicles were detected in the adjacent H&E-stained sections were analyzed. The TUNEL staining results were evaluated by three independent observers.
Follicles consisting of ≥49 % TUNEL positive granulosa cells as well as follicles containing a TUNEL positive oocyte were classified as atretic follicles [49 (link)]. Sections without transferase enzyme and human lymph node sections treated with DNAse served as negative and positive control, respectively.
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8

TUNEL Assay for Apoptosis Detection

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TUNEL assay was conducted using the DeadEndTM colorimetric TUNEL System (Promega, Madison, WI, USA) according to the manufacturer’s protocol [24 (link)]. The slides were viewed under bright-field inverted microscope (Nikon, Tokyo, Japan).
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9

Tumor Apoptosis Quantification in Mice

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To confirm the apoptosis level of tumor in mice, paraffin tissue sections of tumors were processed with the DeadEndTM Colorimetric TUNEL System (Promega, Madison, WI) according to the manufacturer's protocol.
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10

BPA Impacts on Steroidogenesis and Apoptosis

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BPA (CAS no. 80-05-7) was from Sigma Chemical Company (Saint Louis, MO, USA). Rabbit anti-CYP11A1 (ab175408), 3β-HSD (ab65156), StAR (ab203193), Bcl-2 (ab59348), and Bax (ab53154) primary antibody and secondary antibody anti-rabbit were from Abcam (Cambridge, MA). The DeadEndTM Colorimetric TUNEL System was from Promega Corporation (Promega, Madison, WI, USA).
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