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19 protocols using cellulose nitrate membrane filter

1

Isolation of Clostridium difficile from water

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Pre-treatment of samples and bacterial growth from the filters with heat and ethanol shock, respectively was used to reduce the competing bacteria, to increase the sensitivity of the culture and C. difficile recovery. Water samples (50 ml) were subjected to a heat shock by incubation at 70°C for 20 min. The entire volume was then filtered through 0.2 μm cellulose nitrate membrane filter (Whatman) using Milipore filtering system. Filters were placed on selective agar chromID® C. difficile (bioMerieux) and incubated anaerobically at 37°C for 3 days. After incubation, up to 20 presumptive C. difficile colonies were picked from each filter and subcultured onto blood agar plates (COH, bioMerieux). Remaining bacterial growth was swabbed from the filter, resuspended in 700 μl of absolute ethanol and incubated at room temperature for 30 min. After centrifugation the pellet was inoculated onto chromID® C. difficile plates and incubated anaerobically for 2 days. Up to 10 colonies with suitable C. difficile like morphology were subcultured onto COH plates. Isolates were identified using MALDI-TOF (Biotyper, Bruker).
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2

Release Kinetics of Lidocaine from Lipid Particles

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The release of LID from raw LID, GMS-LID1, GMS-LID2, GMS-LID4, and GMS-LID10 particles was performed in Franz diffusion cells consisting of a donor and a receptor compartment separated by a 0.45 μm cellulose nitrate membrane filter (Whatman, Little Chalfont, UK). Franz cells were kept in an orbital shaker (VWR® Incubating Mini Shaker, VWR, Chester, PA, USA) at 37 °C under agitation at 100 rpm. The volume of the receptor compartment was 6 mL and the surface available for diffusion was ca. 0.8 cm2. The receptor compartment was filled with PBS pH 7.4 medium, and 25 mg of particles were placed in the donor compartment with 0.5 mL of PBS medium. Then, 1 mL-aliquots were taken every hour for the first 8 h and then after 24 h, and the same volume was replaced with fresh PBS solution. Samples were filtered with syringe filters (hydrophilic PTFE, 0.22 μm, Scharlau, Barcelona, Spain) and measured by HPLC (see Section 2.5). The release of LID from SLMPs was compared to the dissolution of 3 mg of pure LID, carried out using the same experimental set-up.
LID release profiles of the drug were fitted to the first-order (Equation (2)) and the first-order with lag time (Equation (3)) release kinetics models: % LID released = 100×(1ek1×t)
% LID released = 100×(1ek2×(ttlag))
where k1 and k2 are the kinetic coefficients, t is the elapsed release time, and tlag is the lag time.
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3

Preparation of Dialyzed Bovine Serum Albumin

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Bovine serum albumin was dissolved (30% w/v) in a solution containing (mm): 118 NaCl and 2.5 CaCl2.7H2O. Visking dialysis tubing (Medicell Membranes Ltd., London, UK) was prepared by boiling for 10 min in a solution containing (mm): 1 EDTA, 119 NaHCO3, rinsed with ddH2O and then boiled for another 10 min in 1 mmol l−1 EDTA. The tubing was given a final rinse in ddH2O before the BSA solution was transferred and left to dialyse for 48 h at 4°C against a 20‐fold larger volume of (mm): 118 NaCl and 2.5 CaCl2.7H2O. This removed molecular impurities (molecular mass cut‐off of 12–14 kDa) and saturated the Ca2+‐binding sites of BSA (Smith et al. 2010).
All buffers were filtered through a 5.0 μm cellulose nitrate membrane filter (Whatman, Maidstone, UK). Appropriate corrections were made for Na+ and Ca2+ concentrations in the KH buffer to account for their presence in BSA solution stock (Smith et al. 2010).
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4

Antibiotic Susceptibility of Filter-Biofilms

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In this study, filter-biofilms were used as a biofilm model. The method has previously been used to test the anti-biofilm properties of different wound dressings [25 (link)]. Filter-biofilms were prepared by spotting 10 µL of the ON culture to the center of a 0.2 μm, Ø25 mm Cellulose Nitrate Membrane Filter (Whatman®, Maidstone, UK). Subsequently, filter-biofilms were grown ON to create 24-hour-old biofilms and then transferred to the experimental plates containing 10× MIC of ciprofloxacin or colistin (Sigma-Aldrich, St. Louis, MO, USA) for P. aeruginosa and 10× MIC of fusidic acid and clindamycin (Sigma-Aldrich, St. Louis, MO, USA) for S. aureus filter-biofilms. Non-treated filter-biofilms were prepared similarly and transferred to experimental plates containing no antibiotics.
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5

Microparticle Exposure Effects on Sperm Fertilization

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Microparticles were kept in FSW (10 mg L -1 ; 0.2 μm Whatman cellulose nitrate membrane filter) for a period of 1 month, with agitation, under a natural light-dark cycle. These dispersions were subsequently centrifuged at 2000 g for 5 min, and the supernatants retrieved for use in sperm bioassays. Specifically, 50 μL dry sperm was added to 5 mL supernatant and after 1 h this sperm suspension was used to fertilise eggs as previously described. Fertilisation rate was recorded, and the offspring of the exposed sperm were reared for 72 h upon which the plutei were scored for developmental defects.
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6

Mono- and Co-culture Growth Chamber

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Mono-and co-culture experiments were performed in the purpose-built growth chamber used in Briand et al. (2016) . The device consists of two chambers with a 90 mm flat edge opening on their median part and a 25 mm round neck on the top. Both parts areseparated by a 0.45 µm cellulose nitrate membrane filter (Whatman, Buckinghamshire, UK) that enabled the passage of fluids and dissolved substances between the two chambers, but not cells. A total of six devices (12 chambers) were used in order to have the following conditions in duplicate:
(
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7

Microalgae cultivation and lipid induction

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Wild-type C. reinhardtii (CC-124) was used in this study. Unicellular green algae, C. vulgaris (UTEX# 0265) and H. pluvialis (UTEX# 2505), were obtained from the culture collection of algae at the University of Texas, Austin, TX, USA. The vegetative culture was carried out in Tris-acetate-phosphate (TAP) medium at 25°C. Air was bubbled into the flask culture, which was shaken at 200 rpm to ensure sufficient aeration. Continuous illumination was supplied at an average light intensity of 150 µE m -2 s -1 . In the early exponential stage when lipid production is negligible, we transferred each of the microalgal suspensions into the appropriate inductive conditions as shown in Table 1. The MAP kinase inhibitor was purchased from Promega (U0126). IBMX (I5879) was purchased from Sigma-Aldrich. As a control, we included microalgal culture without any inhibitor or modulator. The dry cell weight was measured by filtering the algal suspension through a pre-dried and pre-weighed 0.45 µm cellulose nitrate membrane filter (Whatman, USA) and dried in an oven at 80°C for 24 h.
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8

Micropore Assay for Pseudomonas Biofilm Growth

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A cellulose nitrate membrane filter (pore size: 0.2-μm diameter: 25 mm, Whatman GmbH, Germany) was placed directly on the agar plate. The plate and filter were dried for 30 min at 37°C before the bacterial overnight (ON) culture was added in a single spot (20-μL bacterial suspension) on the membrane filter. The bacteria were spot inoculated onto the filter directly from the ON culture. The P. aeruginosa used for the experiments was obtained from the Pseudomonas Genetic Stock Center (strain PAO1 19 (link) ). The biofilms were grown on AB-trace glucose (0.5%) (ABTG) plates and incubated for 24, 48, or 72 h at 37°C. A more detailed description for the ON cultures and filter biofilms methodology ("the micropore assay") can be found in Bjarnsholt et al. 20 (link) For a mature biofilm (either grown for 48 or 72 h) to develop, the membrane filter containing the growing biofilm was transferred to a fresh, dried ABTG plate every 24 h. In this way, the fresh media available to the biofilm facilitated growth.
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9

Reagent Procurement for Pharmaceutical Research

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Sodium bicarbonate (≥99.9%) was purchased from Ottogi Corp. (Anyang, Republic of Korea). Hydroxypropyl methylcellulose (Vivapharm Hypromellose 2910), triethyl citrate (≥99.0%), and magnesium stearate were obtained from Whawon Pharm. Co., Ltd. (Hwaseong, Republic of Korea), TCI Co., Ltd. (Tokyo, Japan), and Faci Asia Pacific Pte Ltd. (Singapore), respectively. Opadry (04K19229) and Acryl-Eze (93018509) were donated by Colorcon Inc. (Harleysville, PA, USA). All solutions were prepared with high-performance liquid chromatography (HPLC)-grade water purified with Arium Mini Plus (Sartorius, Goettingen, Germany) and cellulose nitrate membrane filters (47 mm, 0.2 μm, Whatman, Maidstone, UK). All other reagents were of analytical grade or better.
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10

Sampling and Preserving Water Effluents

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Effluent samples were collected in acid-washed 10-L high density polyethylene (HDPE) containers between November 2008 and February 2009, respectively. The samples were filtered through 0.45 μm cellulose nitrate membrane filters (Whatman, UK) on-site and stored in acid-washed 10-L HDPE containers. Samples were packed in ice until returning to the laboratory where they were stored at 4 °C in the dark.
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