The largest database of trusted experimental protocols

4 protocols using anti lc3 2775

1

Protease Inhibitors and Antibodies Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sodium fluoride (S7920), sodium orthovanadate (220590), phenylmethylsulfonyl fluoride (PMSF) (P7626), aprotinin (A162-B), leupeptin (SP-04-2217-B), Triton X-100 (N150), Earle's Balanced Salt Solution (EBSS) (E3024), thapsigargin (T9033), tunicamycin (T7765), E64 (E3132), melphalan (M2011), and staurosporin (S4400) were purchased from Sigma. MG132 (BML-PI102), Epoxomycin (BML-PI127) or Tlck (BML-PI121), Z-Leu-Leu-Glu-AMC (BML-ZW9345), Suc-Leu-Leu-Val-Tyr-AMC (BML-P802) and Ac-Arg-Leu-Arg-AMC (BML-AW9785) were from Enzo Life Sciences. Pepstatin (EI-9-B) was obtained from Euromedex. Anti-Hsp60 (sc-1722), anti-Ubiquitin (sc-8017), anti-Hsp27 (sc-1048) and anti-Hsp90 (sc-69703) were purchased from Santa Cruz Biotechnology. Anti-PSMB5 (PW8140), anti-PSMB6 (PW8145) and anti-PSMB7 (PW8895) were from Enzo life sciences. Anti-PARP (9542), anti-HspB8 (30595), anti-LC3 (2775) and Hrp conjugated anti-rabbit (7074) antibodies were obtained from Cell Signaling Technology. Hrp-conjugated anti-mouse (P0260) and anti-goat (P0449) antibodies were from Dakopatts. Cleaved caspase 3 (9661) was purchased from Ozyme.
+ Open protocol
+ Expand
2

Autophagy and NLRP3 Inflammasome Regulation in THP-1 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
THP-1 cells coincubated with different RBCs were collected. Wild-type, shNC, and low-NLRP3 expression THP-1 cells were triggered with 800 nmol/L of rapamycin to create the autophagy positive control. THP-1 cells were lysed in a radio immunoprecipitation assay (RIPA) buffer (C500005, Sangon Biotech). The expression of autophagy markers on THP-1 was detected using immunoblotting with anti-p62 (5114) and anti-LC3 (2775, Cell Signaling Technology). Anti-NLRP3 (AG-20B-0014-C100, AdipoGen) and antigasdermin D (GSDMD) (HA601046, Hangzhou HuaAn Biotechnology Co., Ltd.) were applied to determine the activation of NLRP3 inflammasome. GAPDH (TA802519, OriGene Technologies) was used as internal control. Each blot was duplicated three times. BandScan software was utilized after development to analyze and record the gray value of the strip. Relative amounts of p62/GAPDH, LC3II/GAPDH, and LC3II/LC3I were adopted to estimate the autophagy situation of THP-1 cells, while those of NLRP3/GAPDH and GSDMD/GAPDH were used to evaluate the activation of NLRP3 inflammasome.
+ Open protocol
+ Expand
3

Multimarker Immunofluorescence Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
For standard immunofluorescence experiments, cells were grown on glass-bottomed six-well plates and fixed with 4% formaldehyde. Blocking was performed with 3% BSA in PBS with 0.1% Triton X-100. Primary and secondary antibody dilutions were performed in the same solution. We used anti–protein disulfide isomerase (2792; Abcam) to detect ER, anti-LC3 (2775S; Cell Signaling Technology) to detect autophagy, anti-LAMP1 (D2D11; Cell Signaling Technology) to detect lysosomes, anticatalase (D4P7B; Cell Signaling Technology) to detect peroxisomes, and anti-GM130 (D6B1; Cell Signaling Technology) to detect the Golgi apparatus. We used as a secondary antibody Alexa Fluor 568–conjugated secondary antibodies (Life Technologies). Nuclei were stained with 1 µg/ml Hoechst 33342 (Life Technologies) during one of the post–secondary antibody washes.
+ Open protocol
+ Expand
4

Antibody Validation and Autophagy Modulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-Flag (F3165) and anti-HA (H6908) antibodies were purchased from Sigma-Aldrich (St. Louis, MO, USA). Anti-Myc (sc40), anti-GAPDH (sc47724), anti-BECN1 (sc48341), and anti-Ub (sc-8017) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-TRAF6 (8028S) and anti-LC3 (2775S) were purchased from Cell Signaling Technology (Danvers, MA, USA). Anti-Mouse IgG H&L (HRP) (ab6728) was purchased from Abcam (Cambridge, MA, USA). Goat anti-Rabbit IgG antibody (HRP) (GTX213110-01) was purchased from GeneTex Inc. (Irvine, CA, USA). Lipopolysaccharide (LPS; L3024), dimethyl sulfoxide (DMSO; 472301), paraformaldehyde (P6148), Triton X-100 (T8787), 3-methyladenine (3-MA; M9281), and Dulbecco’s phosphate-buffered saline (DPBS; D8537) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Polyinosinic-polycytidylic acid (Poly(I:C), tlrl-pic) was purchased from InvivoGen (San Diego, CA, USA). Anti-β-arrestin 2 antibody (PA1-732) and Lipofectamine 2000 (11668019) were purchased from Thermo Fisher Scientific (Waltham, MA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!