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6 protocols using dmem buffer

1

Culturing Breast Cancer Cell Lines

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Human breast cancer cell lines MCF-7, SK-BR-3 and ZR-75 were obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA) in 2010. Human breast cancer cell line MDA-MB-231 was obtained from Dr. Leigh Murphy (University of Manitoba) in 2012. MCF-7, SK-BR-3 and MDA-MB-231 cells were grown in Dulbecco's modified essential medium (DMEM) buffer (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% fetal bovine serum and 100 units/mL penicillin and 100 µg/mL streptomycin. ZR-75 cells were grown in Roswell Park Memorial Institute medium (RPMI) buffer (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% fetal bovine serum and 100 units/mL penicillin and 100 µg/mL streptomycin. All cell lines were grown in a 37°C incubator with 5% CO2.
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2

Estrogen Receptor Signaling in Breast Cancer Cell Lines

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All cells were grown in phenol red free white media for 5 days prior to treatment with estrogen. MCF-7, SK-BR-3 and MDA-MB-231 cells were grown in phenol red free Dulbecco's modified essential medium (DMEM) buffer (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 5% charcoal-stripped fetal bovine serum and 100 units/mL penicillin and 100 µg/mL streptomycin. ZR-75 cells were grown in phenol red free Roswell Park Memorial Institute medium (RPMI) buffer (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 5% charcoal-stripped FBS and 100 units/mL penicillin and 100 µg/mL streptomycin. In transfection experiments, cells were plated to ∼60–70% confluency. For chromatin immunoprecipitation and streptavidin pull-down assay, cells were plated to ∼80–90% confluency. For all experiments, β-Estradiol (Sigma-Aldrich, Oakville, ON, Canada) was made up in ethanol to a stock concentration of 10 mM and stored at −20°C. Tamoxifen (Sigma-Aldrich, Oakville, ON, Canada) was made up in ethanol to a stock concentration of 2 mM and stored at −20°C. Fulvestrant (ICI-182,780) was obtained from Sigma-Aldrich (Oakville, ON, Canada) and was made up in dimethyl sulfoxide to a stock concentration of 500 mM and stored at −20°C.
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3

HeLa Cell Culture and Incubation

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HeLa cells (obtained from ATCC, CCL-2) were cultured in DMEM buffer (Gibco Invitrogen, Grand Island, NY, USA) supplemented with 10% fetal bovine serum (Biowest, France) and 1% antibiotic–antimycotic (Gibco Invitrogen, Grand Island, NY, USA). Cells were seeded onto plastic- or glass-based dishes (diameter: 35 mm) and maintained in a 5% CO2 incubator (Astek SCA-80D, Japan) at 37°C for 1, 2, 3, or 5 days.
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4

Vasopressin Receptor Activation Assay

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Briefly, CHO-V1AR cells were separately suspended in DMEM buffer (Invitrogen, Carlsbad, CA, USA) complemented with 0.1% FCSd and distributed into microplates (4.5× 104 cells/well). Then, fluorescent probe (Fluo4, Invitrogen) mixed with probenecid in HBSS buffer (Invitrogen, Carlsbad, CA, USA) supplemented with 20 mM HEPES, pH 7.4 (Invitrogen) was added to each well, allowing to equilibrate with the cells for 60 min at 37 °C, then 15 min at 22 °C. Thereafter, the assay plates were positioned in a CellLux microplate reader (PerkinElmer, Waltham, MA, USA) and dieckol and PFF-A (12.5, 25, 50, 100, and/or 150 μM), reference agonist, or HBSS buffer (basal control) was added. For stimulated control measurements, AVP at 1 µM was added in separate assay wells. The agonist effect on V1AR was calculated as a % of control response to 1 μM AVP. Similarly, for the antagonist effect, % inhibition of the control response to 10 nM AVP was evaluated. AVP and [d(CH2)51, Tyr (Me)2]-AVP were used as reference agonist and antagonist, respectively.
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5

Functional Assay for hMCH-R1 Receptor Activity

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The functional assay was run onto cells expressing the hMCH-R1 receptor, as described in Wang et al. [61 (link)]. In brief, the cells are suspended in DMEM buffer (Invitrogen), then distributed in microplates at a density of 4.104 cells/well. The fluorescent probe (Fluo4 Direct, Invitrogen) mixed with probenecid in Hanks’ Balanced Salt solution (HBSS) (Invitrogen) complemented with 20 mM HEPES (Invitrogen) (pH 7.4) is then added into each well and equilibrated with the cells for 60 min at 37 °C, then 15 min at 22 °C. Then, the assay plates are positioned in a microplate reader (CellLux, PerkinElmer) which is used for the addition of the test compound, reference agonist or HBSS buffer (basal control), and the measurements of changes in fluorescence intensity, which varies proportionally to the free cytosolic Ca2+ ion concentration. For stimulated control measurements, MCH at 300 nM is added in separate assay wells. The results are expressed as a percentage of the control response to 300 nM MCH. The standard reference agonist is MCH, which is tested in each experiment at several concentrations to generate a concentration-response curve from which its EC50 value is calculated. For the antagonist effect, the results are expressed as a percentage inhibition of the control response to 30 nM MCH, which was added to all tested wells and controls 5 min after the candidate products.
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6

Calcium Imaging of HEK-293 Cells

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In general, transfected HEK-293 cells suspended in DMEM buffer (Invitrogen) containing 1% FCSd were distributed in microplates at a density of 2.104 cells/well. Then, the mixture of fluorescent probe (Fluo4 Direct, Invitrogen) and probenecid in HBSS buffer (Invitrogen) complemented with 20 mM Hepes (Invitrogen) (pH 7.4) was added into each well and incubated for 60 min at 37 °C, followed by 15 min incubation at 22 °C. Thereafter, the assay plates were positioned in a CellLux microplate reader (PerkinElmer, Waltham, MA, USA) which was used for the addition of the following: For agonist assay—test compound, reference agonist, or HBSS buffer (basal control). Linoleic acid at 100 µM was added in separate assay wells for stimulated control measurement. For antagonist assay—test compound or HBSS buffer (basal and stimulated control), then, 5 min later, 20 µM linoleic acid. Agonist results are expressed as a percent of the control response to 100 µM linoleic acid while antagonist results are expressed as percent inhibition of the control response to 20 µM linoleic acid.
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