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11 protocols using pv 6002

1

Histological and Immunohistochemical Analysis of Mouse Joints

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For histological analysis, harvested mouse joints were fixed with 4% PFA for 2 days and embedded in paraffin after decalcification for 14–21 days. Sections (5 μm) were stained with fast green FCF (0.02%) and safranin O (0.1%) according to the manufacturer’s instructions.
Immunohistochemical staining was performed using the DAB staining method as previously described, with some modifications.33 (link),34 (link),102 (link) First, slides were deparaffinized and rehydrated using xylene and different concentrations of alcohol. Antigen retrieval was performed using Trypsin (ZLI-9010, ZSGB-BIO) digestion for 20 min at room temperature. Hydrogen peroxide (3%) was used to block endogenous peroxidase activity by incubating for 10 min at room temperature. Slides were then blocked with 10% donkey serum for 1 h at room temperature and incubated with an anti-P16 antibody (Ab54210, Abcam, 1:200) at 4 °C overnight and with a secondary antibody (PV-6002, ZSGB-BIO) for 1 h at room temperature before DAB staining (ZLI-9017, ZSGB-BIO).
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2

Angiogenesis Assay in Matrigel

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The formation of capillary-like tubular structures was assessed in Matrigel-coated multiwell plates as described previously [18 (link)]. HUVECs were seeded at a density of 1 × 105 cells/ml with SMMC7721 cell supernatants in GFR BD Matrigel matrix-coated 24-well plates and incubated at 37°C for 0–24 h. The formation of tubular structures was examined using an Olympus BX41 microscope. After 24 h of culture, the cells were fixed with 4% paraformaldehyde for 20 min, blocked with 5% goat serum for 20 min, and then stained with anti-CD34 antibodies for 2 h at 37°C. After a second incubation with a two-step IHC detection reagent (PV-6002) (ZSGB-BIO, Beijing, China), reaction products were visualized by immersing the slides in a solution 3,3′diaminobenzidine tetrachloride containing substrate (ZLI-9032) (ZSGB-BIO, Beijing, China). Finally, the slides were counterstained with Mayer's hematoxylin.
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3

Immunohistochemical Analysis of CD4+ and CD8+ T Cells

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Carrying on in vivo suppression assays, the other half of spleen tissue was fixed immediately in 4% paraformaldehyde, and tissue sections were deparaffinized with xylene and rehydrated through graded ethanol washes. Heat mediated antigen retrieval was conducted by boiling in Tris/EDTA buffer (pH 9.0) for 5 min. The slides were incubated with 3% hydrogen peroxide for 20 min to eliminate endogenous peroxidase and then with 10% normal goat serum at room temperature in order to block any non-specific binding. After removing excess blocking buffer, the following primary antibodies, concerning rabbit anti-human CD8 antibody (ab93278, Abcam, Cambridge, UK) and mouse anti-human CD4 antibody (ZM-0418, ZSGB-BIO, Beijing, China), were diluted to the manufacturer’s recommendations and incubated in a humidified chamber at 4 °C overnight. The HRP-conjugated goat anti-rabbit IgG antibody (PV-6001, ZSGB-BIO, Beijing, China) and goat anti-mouse IgG antibody (PV-6002, ZSGB-BIO, Beijing, China) were used as the secondary antibody at 37 °C for 30 min. Finally, staining of the tissue sections was performed with an enhanced HRP-DAB chromogenic substrate kit (TIANGEN Biotech CO., LTD., Beijing, China). The sections were then counterstained with hematoxylin and visualized under a light microscope (Nikon, Tokyo Japan).
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4

Analyzing Osteocalcin Expression and Cytoskeleton Dynamics

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Osteocalcin expression in the right femur was examined by immunohistochemistry. Briefly, tissue sections were treated with 3% H2O2 to remove endogenous peroxidase, incubated with anti-osteocalcin antibody (ab13420, Abcam, Cambridge, UK) at 4°C overnight prior to addition of added secondary antibody (PV-6002, ZSGB-Bio, Beijing, China), incubated at 37° C for 30 min, then colored with DAB (diaminobenzidine) reaction staining. Finally, sections were evaluated by microscopy in a blinded manner.
MT3T3-E1 (5 × 106) cells were seeded in six-well plates and then treated with EXD extract or TNF-α as indicated. Cells were fixed with 4% paraformaldehyde in PBS (0.1 M, pH 7.4) for 15 min, permeabilized with 50 μg/ml digitonin in PBS for 5 min, blocked with 0.1% (v/v) gelatin in PBS for 30 min, and then incubated with primary antibodies for 1 h. After washing, cells were incubated with Alexa Fluor 488-conjugated goat anti-guinea pig and Alexa Fluor 647-conjugated goat anti-rabbit IgG secondary antibodies (Invitrogen, Waltham, MA, USA) for 30 min. Cells were imaged using a laser-scanning microscope (LSM510 META, Carl Zeiss, Oberkochen, Germany) with a Plan Apochromat 63 × NA 1.4 oil differential interference contrast objective lens.
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5

Immunohistochemical Staining of MT1-MMP, β1-Integrin, and YAP1

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Immunochemistry was performed manually as follows: rabbit monoclonal anti-MT1-MMP antibody (ab51074, 1:50, abcam), rabbit monoclonal anti-β1-integrin (ab179471, 1:500, abcam) and rabbit monoclonal anti-YAP1 (ab52771, 1:100, abcam) were purchased for immunohistochemistry test. On the day before the experiment, tissue chips were put into the 37°C oven for the night, softening the wax layer that covered the tissue chip. After dewaxing and dehydration, the tissue chip was put in a boiling EDTA repair solution (pH 8.0) and boiled for 24 min. After 30 min of cooling at room temperature, endogenous peroxidase was added and incubated for 20 min at room temperature. Then, it was rinsed with phosphate-buffered saline 3 times (3 min/time) and added to a 37°C oven for 1 h. Afterward, goat antimouse secondary antibody (PV-6002, Zsbio) was dropped and placed in a 37°C oven for 30 min. Finally, the DAB staining solution was added to obtain a brown color.
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6

Multicolor Immunofluorescence Staining of Glioma

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Paraffin sections of glioma tissues collected from Xiangya Hospital, Central South University, were deparaffinized. After antigen retrieval, sections were blocked with 3% H2O2 and 2% BSA. Different primary antibodies, CD68 (Mouse, 1 : 3000, AiFang Biological, Changsha, China), CD163 (Rabbit, 1 : 3000, Proteintech, Wuhan, China), were sequentially applied, followed by horseradish peroxidase‐conjugated secondary antibody incubation (PV6001, PV6002, ZSGB‐BIO, Beijing, China) and tyramide signal amplification (TSA; Fitc‐TSA, CY3‐TSA and 647‐TSA [Servicebio, Wuhan, China]). After labeling with the human antigens, nuclei were stained with 4′,6‐diamidino2‐phenylindole dihydrochloride (DAPI), and an antifade mounting medium was applied. Stained slides were scanned using the Pannoramic Scanner (3D HISTECH, Budapest, Hungary) to obtain multispectral images. Regarding fluorescence spectra, DAPI glows blue at a UV excitation wavelength of 330–380 nm and emission wavelength of 420 nm, CD163 glows red at an excitation wavelength of 594 nm and emission wavelength of 615 nm, and CD68 glows pink at an excitation wavelength of 608–648 nm and emission wavelength of 672–712 nm. Multispectral images were analyzed, and positive cells were quantified at a single‐cell level by caseviewer (C.V 2.3, C.V 2.0) and pannoramic viewer (P.V 1.15.3) image analysis software.
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7

SARS-CoV-2 Immunohistochemical Detection in Lung Tissues

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Lung tissues collected from the rhesus macaques after SARS-COV-2 viral challenge were fixed in 10% formalin and paraffin embedded. Sections (5 µm) were prepared and stained with hematoxylin and eosin (H&E). For SARS-CoV-2 viral detection, immunohistochemical staining for SARS-CoV2-S antigen was carried out by incubating with a 1:2000 diluted mouse monoclonal antibody specific to S1 of SARS-CoV-2 (Clover Biopharma) overnight at 4 °C. After washing with PBST, non-diluted HRP-conjugated secondary antibody (ZSGB Bio PV-6002) was added for 1 h at room temperature, the sections were developed with DAB (ZSGB Bio ZLI-9017), and mounted with Neutral Balsam for analysis under an upright microscope (BX53, Olympus).
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8

Immunohistochemistry of Lung Tissue

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The lung tissues obtained from the patients or mice were fixed in 4% paraformaldehyde and embedded in paraffin. After dewaxing and hydration, lung sections (5 μm thick) were incubated in 0.3% hydrogen peroxide for 15 min and then incubated in citrate buffer 5 mM at pH 6.0 in a microwave oven for antigen retrieval. Afterward, sections were blocked with goat serum (ZLI-6056, ZSGB-Bio, Beijing, China) and incubated overnight with the primary antibody (antibodies presented in Table 2). Sections were subsequently incubated with horseradish peroxidase (HRP) conjugated goat anti mouse IgG (PV-6002, ZSGB-Bio) for 30 min. Immunoreactivity was visualized with DAB Detection System kit (ZLI-9018, ZSGB-Bio). Images were captured using Olympus BX51 microscope and analyzed by image-pro plus 6.0 software.
Cell counts were calculated and standardized to the number of positive cells/mm2 of the area of interest (cluster, follicle or subepithelium). Twenty fields were randomly selected under 400× microscopy, and the number of positive cells was calculated per mm2.
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9

IHC Staining Protocol for NLRP3 and Inflammation Markers

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IHC staining was performed according to the commercial kits (PV-6001 and PV-6002, ZSGB-Bio, Beijing, China). Antigen retrieval of the paraffin sections was performed using the same protocol described for IF staining. Subsequently, sections were incubated with 0.3% H2O2 for 10 min to inactivate endogenous peroxidase activity and then washed with PBS. After being blocked with 5% goat serum for 15 min, slices were incubated overnight at 4 °C with the primary antibodies as follows: rabbit anti-NLRP3 antibody (ab214185, 1:200, Abcam), rabbit anti-cleaved-caspase 1 p20 (1:100, AF4005, Affinity), IL-1β (1:100, GTX74034, Gentex), rabbit anti-GSDMD (1:800, ab219800, Abcam), mouse anti-IBA-1 (1:300, GB12105, Servicebio), rabbit anti-Ly6G (1:500, GB11229, Servicebio), rabbit anti-CD68 (1:100, DF7518, Affinity). The sections were incubated with enzyme-conjugated goat anti-mouse IgG or goat anti-rabbit IgG polymer for 30 min. Finally, immunoreactivity was visualized using 3,3-diaminobenzidine (DAB, ZLI-9017, ZSGB-Bio) followed by restaining with hematoxylin. Images were captured by a light microscope (Leica, DM2500, Germany).
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10

Histological and Immunohistochemical Analysis of Murine Livers

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The specimens were fixed in formalin (Sigma-Aldrich, F8775) and embedded in paraffin before being cut into 3 μm slices. For H&E staining, after dewaxing and rehydration, the tissue sections were stained in hematoxylin (Beyotime, C0105) for 8 min and were washed with running tap water for 5 min. Next, the sections were stained in eosin (Beyotime, C0105) for 30 s. Finally, the sections were dehydrated and mounted using neutral resins to visualize the pattern in the livers. For immunohistochemical staining, the tissue sections were pretreated with 3% H2O2 (ZSGB-BIO, PV-6001) at room temperature for 10 min and blocked with 10% goat serum (Gibco, 16210064) for 15 min after dewaxing, rehydration and antigen retrieval. The PLK1 expression profile in mice livers was determined by incubating the sections with blocking solution containing anti-PLK1 (Abcam, ab17056) (1:200) at 4°C overnights. The primary antibody was recognized by the horseradish peroxidase (HRP) conjugated secondary antibody (ZSGB-BIO, PV-6002). The slides were incubated with peroxidase substrate DAB kit (ZSGB-BIO, ZLI-9017), and nuclei were stained in hematoxylin for 3 s. The histological and immunohistochemical images were observed and captured under a light microscope (Olympus, Tokyo, Japan).
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