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Colony Formation Assays of Prostate Cancer Cells

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Colony formation assays were performed as previously described11 (link). Enzalutamide, LY3009120, Dabrafenib, Trametinib, sch772984 were obtained from Medkoo Biosciences, all drugs were dissolved in DMSO and stored at − 20 °C. Used seeding densities were 20,000 (LNCaP) or 10,000 (22rv1, CWR-R1) cells/well in 6-well plates, and drugs were added as indicated the next day. For 12-well assays, the used seeding densities were 10,000 (LNCaP), or 5000 (CWR-R1, 22rv1, PC3). The growth medium, containing vehicle or drugs, was refreshed every 36–48 h. After 12–14 days of growth in presence of the drugs, when the control cells reached ~ 90% confluency, all cells were fixed in 2% formaldehyde and stained with 0.1% crystal violet.
For quantification of the growth assays, crystal violet was extracted by incubating the stained plates with 5% acetic acid for 1 h at room temperature. The solution, containing the crystal violet, was transferred to a 96-well plate and measured using the Envision 2104 Multilabel Reader (PerkinElmer). Growth assays were performed at least three times for each experiment. Therefore, when quantified data is shown, bars represent the average data from at least three independent experiments ± SEM. P-values are indicated with ***p < 0.001, **p < 0.01 and *p < 0.05 (two-tailed t-test).
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2

Comprehensive Kinase Inhibitor Evaluation

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Gefitinib (100140), LY3009120 (206161), trametinib (201458), SCH772984 (406578), osimertinib (206426), crizotinib (202222), lapatinib (100946), BKM120 (204690), MK2206 (201913) and AZD8055 (200312) were purchased from MedKoo Biosciences. Erlotinib (S7786), BGB-283 (S7926), selumetinib (S1008) and LY-3214996 (S8534) were purchased from Selleckchem. Annexin V-FITC Apoptosis Staining Detection Kit was purchased from Abcam (ab14085).
Antibodies against Tubulin (T9026) and Vinculin (V9131) were purchased from Sigma; antibodies against EGFR (4267), pERK (4377), ERK (9102) and RSK (8408) were purchased from Cell Signalling; antibody against pRSK (04-419) was purchased from Millipore; antibody against pEGFR (ab5644) was purchased from Abcam. Secondary antibodies Goat Anti-Rabbit IgG (H + L)-HRP Conjugate (1706515) and Goat Anti-Mouse IgG (H + L)-HRP Conjugate (1706516) were purchased from Bio Rad.
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In Vivo Administration of Small Molecule Inhibitors

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E6201 was obtained from Spirita Oncology. LDN-193189 was purchased from Sigma-Aldrich. Trametinib and Buparlisib were purchased from MedKoo Biosciences. Recombinant mouse noggin was from Preprotech, and mouse follistatin was from Shenandoah Biotechnology. For in vivo administration, E6201 was supplied by Spirita Oncology in lyophilized form, pre-weighted in sealed vials, and reconstituted with sterile water for injection, yielding a final concentration of 6 mg/mL in 30% Captisol. Vehicle control solution was prepared by dissolving Captisol in sterile water for injection. The drug was dissolved freshly before each injection. The drug was administered by intraperitoneal injections, using 27 Gauge needles fitted to 0.5 mL syringes.
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