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5 protocols using streptavidin alexa fluor 568 conjugate

1

In Vitro Neuronal Apoptosis Detection

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After fixation, neuronal cultures were incubated with 1X Terminal Deoxynucleotidyl Transferase (TdT) Buffer (3 mM trizma base, 14 mM cacodylate sodium, 0.1 mM cobalt chloride, pH 7.2) for 15 minutes at 37°C and subsequently with TdT reaction mixture containing TdT buffer, 1mM Biotin-16-dUTP, 400 U/mL Terminal Deoxynucleotidyl Transferase [Roche, Indianapolis, IN] for 1 hour at 37°C. After incubation, the enzyme activity was blocked by washing with 2X Saline-sodium citrate (SSC). Unspecific binding sites were blocked by incubating for 30 minutes with a blocking solution containing 1% BSA and 0.1% Tx-100 at RT. Neurons were incubated with 1:3000 Streptavidin Alexa Fluor® 568 conjugate (ThermoFisher Scientific), for 1 hour at RT in the dark. After incubation, neurons were washed repeatedly with PBS and standard immunofluorescence protocol for NeuN antibody and DAPI staining was carried out.
Pictures were taken using Nikon Eclipse E600 epi-fluorescence microscope (Nikon Corp, Tokyo, Japan) with 20× objective. Cell counting was done using ImageJ software (National Institute of Health).
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2

Hyaluronan Localization in Cryosections

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Cryosections (15 µm) affixed to glass slides were washed three times with PBS and blocked with 1% bovine serum albumin (BSA) in PBS for 30 min at room temperature. Following a brief rinse with PBS, the tissue sections were incubated at room temperature with a biotinylated recombinant hyaluronan-binding protein (250 µg/mL; AMS.HKD-BC41; AMSBIO, Cambridge, MA, USA) reconstituted in sterile water and diluted (10 µg/mL) in PBS for 1 h. The sections were washed and stained with Streptavidin Alexa Fluor 568 conjugate (2 µg/mL), Wheat Germ Agglutinin Oregon Green™ 488 conjugate (2.5 µg/mL, Thermofisher) and Hoechst 33342 (1 µg/mL, Thermofisher) in PBS for 1 h at room temperature. The slides were mounted with 10% glycerol and stored at 4 °C until imaging.
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3

Histone H2B Binding Assay in J774A.1 Cells

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J774A.1 cells, cultured on glass-based dishes, were preincubated with anti CD16/CD32 mAb (93, Biolegend) to block the FcγRII/III receptors and incubated with anti-histone H2B mAb (5HH2-2A8, Millipore, 1:200 dilution) and either 100 µg/ml Bt-BSA or Bt-AGEs at 4 °C for 15 min in HBSS-BSA. After washing three times with PBS (−), the cells were stained with streptavidin-Alexa Fluor 568 conjugate (1:1,000 dilution, Invitrogen) and anti-mouse IgG-Alexa Fluor 488 conjugate (1:1,000 dilution, Invitrogen) at 4 °C for 15 min in HBSS-BSA. After washing, the stained cells were fixed with 4% paraformaldehyde in PBS (−) for 10 min at room temperature and further stained with 1 µg/ml 4’,6-Diamidino-2-phenylindole (DAPI, Dojindo). Fluorescent images were obtained using a confocal microscope (FV1200, Olympus) and analyzed by Olympus software (FV10-ASW, Olympus).
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4

Lectin-based Fluorescent Labeling Protocol

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A fluorescent labeling with maackia amurensis agglutinin (MAA) and sambucus nigra amurensis (SNA) lectins was also performed as described above except that the digoxigenin‐labeled lectin was used at 50 µg·mL−1 (for MAA) and at 5 µg·mL−1 (for SNA) and that it was detected with DyLight 488 Anti‐DIG (green for MAA; 1 : 1000; Vector Laboratories, Burlingame, CA, USA) and Streptavidin Alexa Fluor 568 conjugate (red for SNA; 1 : 200; Invitrogen, Carlsbad, CA, USA).
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5

Biocytin Filling and Imaging of Neurons

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Electrodes were filled with intracellular solution supplemented with 0.2%–1% biocytin. In this solution, KMeSO4 was reduced to 119.5 mm to maintain osmotic balance. After the experiment was completed, the electrode was left in place for a minimum of 20 min to allow for adequate filling. Slices were then fixed in 4% paraformaldehyde and refrigerated overnight, washed in PBS, and incubated overnight in streptavidin Alexa Fluor 568 conjugate (1:1000, Invitrogen) at 4°C with agitation. Slices were then washed three times in PBS and mounted. Filled neurons were imaged with an Olympus FluoView laser scanning confocal microscope equipped with a krypton laser and a 20× objective. To capture the full extent of the dendritic tree, most neurons were imaged in two partly overlapping stacks of equal depth. These stacks were stitched together using the “stack combiner” plug-in (MacBiophotonics) within ImageJ (NIH). More than 40 rat cells were filled and imaged, but only 11 of these yielded adequate morphologic reconstruction and the complete set of electrophysiological measurements necessary for analysis. Confocal image stacks from these 11 neurons were used to reconstruct the cells in 3D using Neurolucida (MBF Biosciences). The 3D reconstruction was then analyzed using Neuroexplorer (MBF Biosciences).
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